RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Olfr583Q8VG25 319 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Arl13aQ9D416 372 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 4933407L21RikQ9D476 131 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr591Q7TRR7 314 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 H2-M10.6Q85ZW5 330 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 HnrnpllQ921F4 591 aaKnown RBP9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Ube2j1Q9JJZ4 318 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Ccr9Q9WUT7 369 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Wnk2Q3UH66 2149 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr282A1L1B4 308 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Vmn1r34G3XA52 309 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 RbpjlO08674 515 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Klk1b5P15945 261 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Cox7a2P48771 83 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Tff2Q03404 129 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 PigtQ8BXQ2 582 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Q8C784 167 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr980Q8VH08 310 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Abhd3Q91ZH7 411 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Zfp930A0A1D5RM15 441 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 4930426L09RikE9Q0N7 123 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Vmn1r113G3UWI8 307 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Fstl4Q5STE3 841 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Cadm4Q8R464 388 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Gm13723A0A1L1SUP2 315 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 VegfbP49766 207 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Clec7aQ6QLQ4 244 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 FkrpQ8CG64 494 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Yif1aQ91XB7 293 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 1700025F22RikQ9D9Y7 111 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Nudt3Q9JI46 168 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Clec1bQ9JL99 229 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Rhox7bA6PW38 321 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Sstr5O08858 362 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Nme1P15532 152 aaKnown RBP9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 PjvkQ0ZLH2 352 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr1086Q8VFL9 310 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 VitQ8VHI5 650 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Fam210bQ9D8B6 190 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Nup210lQ9D2F7 1881 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Itln1O88310 313 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 CamlgP49070 294 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Lhx4P53776 390 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Ttyh2Q3TH73 532 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Rnf223Q3UV31 285 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Vma21Q78T54 101 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Aqp6Q8C4A0 293 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Defb36Q8K3U4 67 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 IcaQ9DBD0 700 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 FcmrA1KXC4 422 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Rnf148G3X9R7 316 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Gdf1P20863 357 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Guca2aP33680 116 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Ppp1caP62137 330 aaKnown RBP9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Glra1Q64018 457 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Slc35e1Q8CD26 409 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Fiz1Q9WTJ4 500 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Tusc2Q9WVF8 110 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Phf1Q9Z1B8 559 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Trav10nA0A075B622 114 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Trav10A0A075B642 114 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr1223A0A1L1SU13 311 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Gm13547A2ARC0 163 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 2410141K09RikK7N769 464 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 IghgP01863 330 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 PtgirP43252 415 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Dnase1P49183 284 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Tcl1aP56280 116 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Nrsn2Q5HZK2 202 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr12Q60894 333 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Q9CRW3 126 aa9.43□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Slc6a12P31651 614 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Slc35e3Q6PGC7 313 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 B3gnt8Q8R3I9 389 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Pnpla3Q91WW7 413 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Rp1P56716 2095 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 AU041133A0A0J9YVH3 498 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 5430403G16RikD3Z5L4 667 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Adap1E9PY16 374 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Csf3P09920 208 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Chrna7P49582 502 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Adamts8P57110 905 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Q24JP4 165 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr921Q7TRC0 313 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Sec24bQ80ZX0 1251 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Adam34A2RSG8 714 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 CckarO08786 436 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Sirt6P59941 334 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 LiphQ8CIV3 451 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Loxhd1C8YR32 2068 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Apobec1P51908 229 aaKnown RBP9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Eif3iQ9QZD9 325 aaKnown RBP9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Asah1Q9WV54 394 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 A0A286YDM5 308 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Slc35d1A2AKQ0 355 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Nxpe5E0CX47 564 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr547E9PXN3 311 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Ctdsp1P58466 261 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 1700009N14RikQ14AA6 216 aaKnown RBP9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 MENTQ569E4 350 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms