RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Plppr1Q8BFZ2 325 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Cdadc1Q8BMD5 523 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Tnfsfm13Q8BXS2 410 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gltpd2Q8K0R6 321 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Slc25a28Q8R0Z5 364 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr1491Q8VEZ5 319 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr272Q8VGA0 319 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 MrgprdQ91ZB8 321 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Mrpl54Q9CPW3 135 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Ifitm3Q9CQW9 137 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 AspdhQ9DCQ2 287 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Elovl1Q9JLJ5 279 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 MvkQ9R008 395 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Syt8Q9R0N6 395 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Ighv1-54A0A075B5W5 117 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr1025-ps1A0A140T8K3 312 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 E030025P04RikA2A6V5 185 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gm8020F6WLE9 229 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gm5458L7N219 204 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Hdac3O88895 424 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 P06344 263 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Clec3bP43025 202 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Rfx3P48381 749 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Sec61a1P61620 476 aaKnown RBP6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Ascl1Q02067 231 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Cass4Q08EC4 804 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Ankrd33bQ3U0L2 486 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Pon3Q62087 354 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gpatch2Q7TQC7 527 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Coro2bQ8BH44 480 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Pdlim5Q8CI51 591 aaKnown RBP6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Kctd11Q8K485 232 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Nkd2Q8VE28 461 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr446Q8VEV0 308 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr131Q8VGC8 314 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Tspan2Q922J6 221 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 HadhbQ99JY0 475 aaKnown RBP6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Tmem51Q99LG1 249 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gid4Q9CPY6 217 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Q9CQT9 129 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Lmntd1Q9D4C1 413 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Jam3Q9D8B7 310 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Zfpl1Q9DB43 310 aa6.07□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gm45736A0A1B0GS18 427 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr1034A0A1L1ST14 310 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Obp1bA2AEP0 171 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Fthl17bA2AHC5 176 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Fthl17cA2AHC6 176 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gm14743A2BHD2 171 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Calhm1D3Z291 348 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Vmn2r16E9Q025 850 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gstp3F6RWR5 210 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr893K7N678 312 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Vmn1r120K7N6J6 305 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Igh-1aP01865 398 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Il7rP16872 459 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gabrb1P50571 474 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Rab1AP62821 205 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr1136Q0VBI4 310 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Fthl17fQ3SXD2 176 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Tmem18Q3TUD9 140 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Q504N7 393 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Dhrs9Q58NB6 319 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 CalcrQ60755 533 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Slc22a20Q80UJ1 556 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 SynprQ8BGN8 265 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Mblac1Q8BWY4 260 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Prkd2Q8BZ03 875 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Cnot2Q8C5L3 540 aaKnown RBP6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Sec14l4Q8R0F9 403 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr434Q8VF17 321 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr47Q8VF18 321 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr133Q8VG94 312 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr1294Q8VGE5 312 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Fmo4Q8VHG0 560 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Defb8Q91V82 60 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 S1pr5Q91X56 400 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Rnf141Q99MB7 230 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Ctrb1Q9CR35 263 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Rhox2aQ9D4Y3 191 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 SlirpQ9D8T7 112 aaKnown RBP6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr710Q9EP55 310 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Prg4Q9JM99 1054 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Cacna1iE9Q7P2 2199 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr115B2RTB9 312 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Igsf23B2RTN2 239 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gm10376D3YXI8 184 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gm3676D3Z236 184 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr430E9Q5F1 317 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gm8660K7N6J2 305 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Olfr895L7N210 316 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gm10375L7N286 184 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Gm3573L7N292 184 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Sh2b3O09039 548 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 NdnP25233 325 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Srp9P49962 86 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 ActbP60710 375 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Actg1P63260 375 aaKnown RBP6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Lyg2Q3V1I0 213 aa6.06□□□□□ -1.44
Bdnf-201ENSMUST00000053317 Sema6dQ76KF0 1073 aa6.06□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms