RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Q9D9C7 252 aa11.38□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Ldb3Q9JKS4 723 aaKnown RBP11.38□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Prl3c1Q9QUN5 212 aa11.38□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Syt11Q9R0N3 430 aa11.38□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Gm3550W4VSN7 160 aa11.38□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Olfr1214A2ATG3 311 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Vmn1r174E9PYW5 313 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Npffr1E9Q468 432 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Vmn2r30K7N5W1 852 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Vmn2r47K7N709 852 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 IfngP01580 155 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Ccr1l1P51676 356 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Dcaf7P61963 342 aaKnown RBP11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Rspo4Q8BJ73 228 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Sdhaf4Q8BTE0 104 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 A930004D18RikQ8C8W7 157 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Znf281Q99LI5 893 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Gje1Q9CX92 205 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 4930447A16RikQ9D5F6 132 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Galnt16Q9JJ61 558 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Hsf4Q9R0L1 492 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Olfr1326-ps1A0A140T8J7 311 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Ankrd60A2AMD2 318 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Olfr740E9PV79 311 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Ogg1O08760 345 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Clec3bP43025 202 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Olfr1340Q3KPC7 315 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Wfdc6aQ3UW55 136 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Olfr1283Q7TQY4 305 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Rtp2Q80ZI2 223 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Tsen54Q8C2A2 525 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Lrrc26Q91W20 331 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Lhx6Q9R1R0 363 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Rgs11Q9Z2H1 443 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Ube2dnl1A2AFH1 155 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 C1ql1O88992 258 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Tcrg-V1P06325 135 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Il9P15247 144 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 GcdhQ60759 438 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Sema6dQ76KF0 1073 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Nfam1Q8R4V1 264 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Pofut1Q91ZW2 393 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Tmem33Q9CR67 247 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Mcm3apQ9WUU9 1971 aa11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 MylkQ6PDN3 1941 aaKnown RBP11.37□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Hbb-yP02104 147 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Itgb2P11835 771 aaKnown RBP11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Tppp2Q0P5Y3 170 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 AtraidQ6PGD0 223 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Tfap2eQ6VUP9 442 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Pi15Q8BS03 258 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Ube3dQ8BX13 368 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Galnt6Q8C7U7 622 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Olfr497Q8VG08 314 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Mansc1Q9CR33 414 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Q9CYS6 286 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Hacd1Q9QY80 281 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Foxo1Q9R1E0 652 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Cx3cr1Q9Z0D9 354 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Igkv4-86A0A0G2JGE7 114 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 A0A286YCH8 300 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 3110040M04RikA0A286YDK0 300 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 A0A286YE43 300 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 LexmA2AVQ5 414 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Ercc1P07903 298 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Kcng3P59053 433 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Rps11P62281 158 aaKnown RBP11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Clec12bQ149M0 275 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Olfr145Q60882 310 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 SprnQ8BWU1 147 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Olfr1100Q8VFM1 321 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Ddah2Q99LD8 285 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Samd8Q9DA37 478 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Eml5Q8BQM8 1977 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Olfr573-ps1A0A1B0GRU2 297 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Tmem240B2RWJ3 173 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Vmn1r7E9Q8T0 311 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Olfr13P34984 310 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Nkx2-1P50220 372 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 S1pr2P52592 352 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Uck1P52623 277 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 NcanP55066 1268 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 CycsP62897 105 aaKnown RBP11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 CluQ06890 448 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Ifna15Q61718 190 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Znf629Q6A085 867 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Rph3alQ768S4 302 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 BphlQ8R164 291 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 PsphQ99LS3 225 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Cdc42ep3Q9CQC5 254 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Tmem175Q9CXY1 499 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 ManbalQ9D8X0 85 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Pla2g2fQ9QZT4 168 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Dnah12Q3V0Q1 3086 aa11.36□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Gm42791D3YYB5 209 aa11.35□□□□□ -0.59
Clcn3-201ENSMUST00000004430 GmlE9PX31 176 aa11.35□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Vmn1r204I7HIK1 302 aa11.35□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Il7rP16872 459 aa11.35□□□□□ -0.59
Clcn3-201ENSMUST00000004430 NdnP25233 325 aa11.35□□□□□ -0.59
Clcn3-201ENSMUST00000004430 Otx2P80206 289 aa11.35□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 63 ms