RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 UNCXA6NJT0 531 aa11.02□□□□□ -0.65
LINC00339-212ENST00000642072 GJA5P36382 358 aa11.02□□□□□ -0.65
LINC00339-212ENST00000642072 INHBEP58166 350 aa11.02□□□□□ -0.65
LINC00339-212ENST00000642072 CAP1Q01518 475 aa11.02□□□□□ -0.65
LINC00339-212ENST00000642072 WNK4Q96J92 1243 aa11.02□□□□□ -0.65
LINC00339-212ENST00000642072 PPP2R3BQ9Y5P8 575 aa11.02□□□□□ -0.65
LINC00339-212ENST00000642072 A0A1B0GUL6 1792 aa11.02□□□□□ -0.65
LINC00339-212ENST00000642072 RBBP6Q7Z6E9 1792 aaKnown RBP11.02□□□□□ -0.65
LINC00339-212ENST00000642072 ECM29Q5VYK3 1845 aa11.01□□□□□ -0.65
LINC00339-212ENST00000642072 POTEFA5A3E0 1075 aa11.01□□□□□ -0.65
LINC00339-212ENST00000642072 SPDYE2BA6NHP3 402 aa11.01□□□□□ -0.65
LINC00339-212ENST00000642072 SPDYE6P0CI01 402 aa11.01□□□□□ -0.65
LINC00339-212ENST00000642072 IL1R1P14778 569 aa11.01□□□□□ -0.65
LINC00339-212ENST00000642072 DLGAP5Q15398 846 aa11.01□□□□□ -0.65
LINC00339-212ENST00000642072 SLC10A4Q96EP9 437 aa11.01□□□□□ -0.65
LINC00339-212ENST00000642072 TRIM17Q9Y577 477 aa11.01□□□□□ -0.65
LINC00339-212ENST00000642072 TESPA1A2RU30 521 aaPredicted RBP11□□□□□ -0.65
LINC00339-212ENST00000642072 SLC4A2P04920 1241 aa11□□□□□ -0.65
LINC00339-212ENST00000642072 FKBP1AP62942 108 aaKnown RBP11□□□□□ -0.65
LINC00339-212ENST00000642072 FLIIQ13045 1269 aa11□□□□□ -0.65
LINC00339-212ENST00000642072 CRHR2Q13324 411 aa11□□□□□ -0.65
LINC00339-212ENST00000642072 CCDC27Q2M243 656 aa11□□□□□ -0.65
LINC00339-212ENST00000642072 TWISTNBQ3B726 338 aaPredicted RBP11□□□□□ -0.65
LINC00339-212ENST00000642072 INTS3Q68E01 1043 aaKnown RBP11□□□□□ -0.65
LINC00339-212ENST00000642072 LINS1Q8NG48 757 aa11□□□□□ -0.65
LINC00339-212ENST00000642072 ARMC5Q96C12 935 aa11□□□□□ -0.65
LINC00339-212ENST00000642072 PRMT6Q96LA8 375 aaPredicted RBP11□□□□□ -0.65
LINC00339-212ENST00000642072 MPHOSPH8Q99549 860 aa11□□□□□ -0.65
LINC00339-212ENST00000642072 PTPN18Q99952 460 aa11□□□□□ -0.65
LINC00339-212ENST00000642072 STK31Q9BXU1 1019 aa11□□□□□ -0.65
LINC00339-212ENST00000642072 CLRN2A0PK11 232 aa10.99□□□□□ -0.65
LINC00339-212ENST00000642072 PPP1R12BO60237 982 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-212ENST00000642072 TAF5LO75529 589 aa10.99□□□□□ -0.65
LINC00339-212ENST00000642072 USP2O75604 605 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-212ENST00000642072 FOXO4P98177 505 aa10.99□□□□□ -0.65
LINC00339-212ENST00000642072 CFAP100Q494V2 611 aa10.99□□□□□ -0.65
LINC00339-212ENST00000642072 HABP4Q5JVS0 413 aaKnown RBP10.99□□□□□ -0.65
LINC00339-212ENST00000642072 NBPF12Q5TAG4 269 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-212ENST00000642072 GCC1Q96CN9 775 aa10.99□□□□□ -0.65
LINC00339-212ENST00000642072 PTPN22Q9Y2R2 807 aa10.99□□□□□ -0.65
LINC00339-212ENST00000642072 OTOFQ9HC10 1997 aa10.99□□□□□ -0.65
LINC00339-212ENST00000642072 KCNJ4P48050 445 aa10.98□□□□□ -0.65
LINC00339-212ENST00000642072 SUPT20HL1Q3ZLR7 823 aa10.98□□□□□ -0.65
LINC00339-212ENST00000642072 WWC1Q8IX03 1113 aa10.98□□□□□ -0.65
LINC00339-212ENST00000642072 HELBQ8NG08 1087 aaPredicted RBP10.98□□□□□ -0.65
LINC00339-212ENST00000642072 CD99L2Q8TCZ2 262 aa10.98□□□□□ -0.65
LINC00339-212ENST00000642072 DNAAF4Q8WXU2 420 aa10.98□□□□□ -0.65
LINC00339-212ENST00000642072 ERO1AQ96HE7 468 aa10.98□□□□□ -0.65
LINC00339-212ENST00000642072 MS4A4AQ96JQ5 239 aa10.98□□□□□ -0.65
LINC00339-212ENST00000642072 TEPSINQ96N21 525 aa10.98□□□□□ -0.65
LINC00339-212ENST00000642072 ANKRD18BA2A2Z9 1011 aa10.97□□□□□ -0.65
LINC00339-212ENST00000642072 F8W031 263 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-212ENST00000642072 IREB2P48200 963 aaKnown RBP10.97□□□□□ -0.65
LINC00339-212ENST00000642072 RASA3Q14644 834 aa10.97□□□□□ -0.65
LINC00339-212ENST00000642072 SPDYE2Q495Y8 402 aa10.97□□□□□ -0.65
LINC00339-212ENST00000642072 CDAN1Q8IWY9 1227 aa10.97□□□□□ -0.65
LINC00339-212ENST00000642072 ANKRD13AQ8IZ07 590 aa10.97□□□□□ -0.65
LINC00339-212ENST00000642072 MYH16Q9H6N6 1097 aa10.97□□□□□ -0.65
LINC00339-212ENST00000642072 JAG2Q9Y219 1238 aa10.97□□□□□ -0.65
LINC00339-212ENST00000642072 IL16Q14005 1332 aa10.97□□□□□ -0.65
LINC00339-212ENST00000642072 FAM205AQ6ZU69 1335 aa10.97□□□□□ -0.65
LINC00339-212ENST00000642072 TRIOBPQ9H2D6 2365 aa10.97□□□□□ -0.65
LINC00339-212ENST00000642072 LAMA3Q16787 3333 aa10.97□□□□□ -0.65
LINC00339-212ENST00000642072 MYO1BO43795 1136 aa10.96□□□□□ -0.65
LINC00339-212ENST00000642072 EN2P19622 333 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-212ENST00000642072 FKBP5Q13451 457 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-212ENST00000642072 CCDC184Q52MB2 194 aa10.96□□□□□ -0.65
LINC00339-212ENST00000642072 EPHA10Q5JZY3 1008 aa10.96□□□□□ -0.65
LINC00339-212ENST00000642072 BEND3Q5T5X7 828 aa10.96□□□□□ -0.65
LINC00339-212ENST00000642072 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-212ENST00000642072 ZNF804AQ7Z570 1209 aa10.96□□□□□ -0.65
LINC00339-212ENST00000642072 BRI3BPQ8WY22 251 aa10.96□□□□□ -0.65
LINC00339-212ENST00000642072 ZNF333Q96JL9 665 aa10.96□□□□□ -0.65
LINC00339-212ENST00000642072 EFCC1Q9HA90 598 aa10.96□□□□□ -0.65
LINC00339-212ENST00000642072 VEZTQ9HBM0 779 aa10.96□□□□□ -0.65
LINC00339-212ENST00000642072 A0A0C4DFX4 3053 aa10.95□□□□□ -0.66
LINC00339-212ENST00000642072 FANCIQ9NVI1 1328 aa10.95□□□□□ -0.66
LINC00339-212ENST00000642072 VAMP4O75379 141 aa10.95□□□□□ -0.66
LINC00339-212ENST00000642072 SP3Q02447 781 aa10.95□□□□□ -0.66
LINC00339-212ENST00000642072 IFIT5Q13325 482 aaKnown RBP10.95□□□□□ -0.66
LINC00339-212ENST00000642072 NCBP3Q53F19 620 aaKnown RBP10.95□□□□□ -0.66
LINC00339-212ENST00000642072 OTUD7BQ6GQQ9 843 aa10.95□□□□□ -0.66
LINC00339-212ENST00000642072 TDRD7Q8NHU6 1098 aaKnown RBP10.95□□□□□ -0.66
LINC00339-212ENST00000642072 CNKSR2Q8WXI2 1034 aa10.95□□□□□ -0.66
LINC00339-212ENST00000642072 ZNF70Q9UC06 446 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-212ENST00000642072 SERPINA10Q9UK55 444 aa10.95□□□□□ -0.66
LINC00339-212ENST00000642072 ARAP2Q8WZ64 1704 aa10.95□□□□□ -0.66
LINC00339-212ENST00000642072 FXR1P51114 621 aaKnown RBP eCLIP10.94□□□□□ -0.66
LINC00339-212ENST00000642072 LMBR1LQ6UX01 489 aa10.94□□□□□ -0.66
LINC00339-212ENST00000642072 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.94□□□□□ -0.66
LINC00339-212ENST00000642072 OPTNQ96CV9 577 aa10.94□□□□□ -0.66
LINC00339-212ENST00000642072 ZNF594Q96JF6 807 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-212ENST00000642072 ELP3Q9H9T3 547 aa10.94□□□□□ -0.66
LINC00339-212ENST00000642072 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-212ENST00000642072 F6X3S4 739 aa10.93□□□□□ -0.66
LINC00339-212ENST00000642072 TNFAIP1Q13829 316 aa10.93□□□□□ -0.66
LINC00339-212ENST00000642072 VGLL4Q14135 290 aa10.93□□□□□ -0.66
LINC00339-212ENST00000642072 GRIK5Q16478 980 aa10.93□□□□□ -0.66
LINC00339-212ENST00000642072 MFSD14BQ5SR56 506 aa10.93□□□□□ -0.66
LINC00339-212ENST00000642072 FAM84BQ96KN1 310 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms