RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 PFKFB2O60825 505 aa21.13■□□□□ 0.97
PHGDH-226ENST00000641756 ERFEQ4G0M1 354 aa21.13■□□□□ 0.97
PHGDH-226ENST00000641756 AGXT2Q9BYV1 514 aa21.13■□□□□ 0.97
PHGDH-226ENST00000641756 CCT2P78371 535 aaKnown RBP21.12■□□□□ 0.97
PHGDH-226ENST00000641756 CLEC4GQ6UXB4 293 aa21.12■□□□□ 0.97
PHGDH-226ENST00000641756 C3orf67Q6ZVT6 689 aa21.12■□□□□ 0.97
PHGDH-226ENST00000641756 SPATA5Q8NB90 893 aa21.12■□□□□ 0.97
PHGDH-226ENST00000641756 PDE6AP16499 860 aa21.11■□□□□ 0.97
PHGDH-226ENST00000641756 UBE2HP62256 183 aa21.11■□□□□ 0.97
PHGDH-226ENST00000641756 RASGRF1Q13972 1273 aa21.11■□□□□ 0.97
PHGDH-226ENST00000641756 SYAP1Q96A49 352 aaPredicted RBP21.11■□□□□ 0.97
PHGDH-226ENST00000641756 RTL9Q8NET4 1388 aa21.11■□□□□ 0.97
PHGDH-226ENST00000641756 CHRNDQ07001 517 aa21.11■□□□□ 0.97
PHGDH-226ENST00000641756 UBE3CQ15386 1083 aa21.11■□□□□ 0.97
PHGDH-226ENST00000641756 GPHNQ9NQX3 736 aaPredicted RBP21.11■□□□□ 0.97
PHGDH-226ENST00000641756 ZNF831Q5JPB2 1677 aa21.1■□□□□ 0.97
PHGDH-226ENST00000641756 PDIA4P13667 645 aaKnown RBP21.1■□□□□ 0.97
PHGDH-226ENST00000641756 BCAMP50895 628 aa21.1■□□□□ 0.97
PHGDH-226ENST00000641756 NCOA5Q9HCD5 579 aaKnown RBP21.1■□□□□ 0.97
PHGDH-226ENST00000641756 ATRNO75882 1429 aa21.1■□□□□ 0.97
PHGDH-226ENST00000641756 CNTNAP4Q9C0A0 1308 aa21.1■□□□□ 0.97
PHGDH-226ENST00000641756 TCRBV5S4A2TA0A5A2 114 aa21.09■□□□□ 0.97
PHGDH-226ENST00000641756 ZNF213O14771 459 aa21.09■□□□□ 0.97
PHGDH-226ENST00000641756 CTDNEP1O95476 244 aa21.09■□□□□ 0.97
PHGDH-226ENST00000641756 TBC1D9BQ66K14 1250 aa21.09■□□□□ 0.97
PHGDH-226ENST00000641756 NSUN7Q8NE18 718 aaKnown RBP21.09■□□□□ 0.97
PHGDH-226ENST00000641756 PPFIA3O75145 1194 aa21.08■□□□□ 0.97
PHGDH-226ENST00000641756 APPP05067 770 aa21.08■□□□□ 0.97
PHGDH-226ENST00000641756 FOSBP53539 338 aa21.08■□□□□ 0.97
PHGDH-226ENST00000641756 CSPP1Q1MSJ5 1256 aa21.08■□□□□ 0.97
PHGDH-226ENST00000641756 FAM184AQ8NB25 1140 aa21.08■□□□□ 0.97
PHGDH-226ENST00000641756 SMARCC2Q8TAQ2 1214 aa21.08■□□□□ 0.97
PHGDH-226ENST00000641756 BCL2L12Q9HB09 334 aa21.08■□□□□ 0.97
PHGDH-226ENST00000641756 SRP68Q9UHB9 627 aaKnown RBP21.08■□□□□ 0.97
PHGDH-226ENST00000641756 PDIA3P30101 505 aaKnown RBP21.08■□□□□ 0.96
PHGDH-226ENST00000641756 KRT85P78386 507 aa21.08■□□□□ 0.96
PHGDH-226ENST00000641756 BTAF1O14981 1849 aa21.08■□□□□ 0.96
PHGDH-226ENST00000641756 PTPDC1A2A3K4 754 aa21.07■□□□□ 0.96
PHGDH-226ENST00000641756 MB21D2Q8IYB1 491 aaPredicted RBP21.07■□□□□ 0.96
PHGDH-226ENST00000641756 MAGEB6Q8N7X4 407 aa21.07■□□□□ 0.96
PHGDH-226ENST00000641756 CDC5LQ99459 802 aaKnown RBP21.07■□□□□ 0.96
PHGDH-226ENST00000641756 LLPHQ9BRT6 129 aaKnown RBP21.07■□□□□ 0.96
PHGDH-226ENST00000641756 TAF1P21675 1872 aa21.07■□□□□ 0.96
PHGDH-226ENST00000641756 H3BQV1 296 aa21.07■□□□□ 0.96
PHGDH-226ENST00000641756 PRC1O43663 620 aa21.07■□□□□ 0.96
PHGDH-226ENST00000641756 IFFO2Q5TF58 517 aa21.07■□□□□ 0.96
PHGDH-226ENST00000641756 TTC6Q86TZ1 520 aa21.07■□□□□ 0.96
PHGDH-226ENST00000641756 NCOA7Q8NI08 942 aa21.07■□□□□ 0.96
PHGDH-226ENST00000641756 AIDAQ96BJ3 306 aa21.07■□□□□ 0.96
PHGDH-226ENST00000641756 NBPF3Q9H094 633 aa21.07■□□□□ 0.96
PHGDH-226ENST00000641756 GNPATO15228 680 aa21.06■□□□□ 0.96
PHGDH-226ENST00000641756 GTF2E1P29083 439 aaPredicted RBP21.06■□□□□ 0.96
PHGDH-226ENST00000641756 RALYLQ86SE5 291 aaKnown RBP21.06■□□□□ 0.96
PHGDH-226ENST00000641756 DENND2AQ9ULE3 1009 aa21.06■□□□□ 0.96
PHGDH-226ENST00000641756 MCM5P33992 734 aa21.05■□□□□ 0.96
PHGDH-226ENST00000641756 ANTXR2P58335 489 aa21.05■□□□□ 0.96
PHGDH-226ENST00000641756 MAP3K12Q12852 859 aa21.05■□□□□ 0.96
PHGDH-226ENST00000641756 CCDC183Q5T5S1 534 aa21.05■□□□□ 0.96
PHGDH-226ENST00000641756 ANKRD18AQ8IVF6 992 aa21.05■□□□□ 0.96
PHGDH-226ENST00000641756 FAM43AQ8N2R8 423 aa21.05■□□□□ 0.96
PHGDH-226ENST00000641756 ZNF274Q96GC6 653 aaPredicted RBP21.05■□□□□ 0.96
PHGDH-226ENST00000641756 TFIP11Q9UBB9 837 aaKnown RBP21.05■□□□□ 0.96
PHGDH-226ENST00000641756 SCN7AQ01118 1682 aa21.05■□□□□ 0.96
PHGDH-226ENST00000641756 WTIPA6NIX2 430 aaPredicted RBP21.05■□□□□ 0.96
PHGDH-226ENST00000641756 TBC1D10CQ8IV04 446 aa21.05■□□□□ 0.96
PHGDH-226ENST00000641756 STRBPQ96SI9 672 aaKnown RBP21.05■□□□□ 0.96
PHGDH-226ENST00000641756 CCNL1Q9UK58 526 aaPredicted RBP21.05■□□□□ 0.96
PHGDH-226ENST00000641756 IQSEC3Q9UPP2 1182 aaPredicted RBP21.05■□□□□ 0.96
PHGDH-226ENST00000641756 THSD7AQ9UPZ6 1657 aa21.05■□□□□ 0.96
PHGDH-226ENST00000641756 CASZ1Q86V15 1759 aa21.05■□□□□ 0.96
PHGDH-226ENST00000641756 DOCK2Q92608 1830 aa21.04■□□□□ 0.96
PHGDH-226ENST00000641756 RPS6KA4O75676 772 aa21.04■□□□□ 0.96
PHGDH-226ENST00000641756 PHF14O94880 888 aa21.04■□□□□ 0.96
PHGDH-226ENST00000641756 RESTQ13127 1097 aa21.04■□□□□ 0.96
PHGDH-226ENST00000641756 SF3B3Q15393 1217 aaKnown RBP21.04■□□□□ 0.96
PHGDH-226ENST00000641756 RNF214Q8ND24 703 aa21.04■□□□□ 0.96
PHGDH-226ENST00000641756 ANP32BQ92688 251 aaKnown RBP21.04■□□□□ 0.96
PHGDH-226ENST00000641756 TSPY26PQ9H489 355 aa21.04■□□□□ 0.96
PHGDH-226ENST00000641756 SPATA31A6Q5VVP1 1343 aa21.04■□□□□ 0.96
PHGDH-226ENST00000641756 MBD4O95243 580 aa21.04■□□□□ 0.96
PHGDH-226ENST00000641756 CCDC173Q0VFZ6 552 aa21.04■□□□□ 0.96
PHGDH-226ENST00000641756 NKX2-3Q8TAU0 364 aa21.04■□□□□ 0.96
PHGDH-226ENST00000641756 NARFQ9UHQ1 456 aa21.04■□□□□ 0.96
PHGDH-226ENST00000641756 RC3H1Q5TC82 1133 aaKnown RBP21.03■□□□□ 0.96
PHGDH-226ENST00000641756 AMIGO3Q86WK7 504 aa21.03■□□□□ 0.96
PHGDH-226ENST00000641756 RAB11FIP4Q86YS3 637 aa21.03■□□□□ 0.96
PHGDH-226ENST00000641756 FBXL16Q8N461 479 aa21.03■□□□□ 0.96
PHGDH-226ENST00000641756 CCDC24Q8N4L8 307 aa21.03■□□□□ 0.96
PHGDH-226ENST00000641756 ARMT1Q9H993 441 aa21.03■□□□□ 0.96
PHGDH-226ENST00000641756 RRAGDQ9NQL2 400 aaPredicted RBP21.03■□□□□ 0.96
PHGDH-226ENST00000641756 NHSQ6T4R5 1651 aa21.03■□□□□ 0.96
PHGDH-226ENST00000641756 HMGN5P82970 282 aaKnown RBP21.02■□□□□ 0.96
PHGDH-226ENST00000641756 CELF1Q92879 486 aaKnown RBP21.02■□□□□ 0.96
PHGDH-226ENST00000641756 KLF18A0A0U1RQI7 1052 aa21.02■□□□□ 0.96
PHGDH-226ENST00000641756 GYG1P46976 350 aa21.02■□□□□ 0.96
PHGDH-226ENST00000641756 EVCP57679 992 aa21.02■□□□□ 0.96
PHGDH-226ENST00000641756 MEX3CQ5U5Q3 659 aaKnown RBP21.02■□□□□ 0.96
PHGDH-226ENST00000641756 SALL1Q9NSC2 1324 aa21.02■□□□□ 0.95
PHGDH-226ENST00000641756 ZPR1O75312 459 aa21.01■□□□□ 0.95
PHGDH-226ENST00000641756 TRDNQ13061 729 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms