RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 COL25A1Q9BXS0 654 aaPredicted RBP10.7□□□□□ -0.7
SCARB2-226ENST00000640916 ALPK3Q96L96 1907 aa10.69□□□□□ -0.7
SCARB2-226ENST00000640916 G3V3G9 751 aa10.69□□□□□ -0.7
SCARB2-226ENST00000640916 RTL5Q5HYW3 569 aaPredicted RBP10.69□□□□□ -0.7
SCARB2-226ENST00000640916 MS4A4AQ96JQ5 239 aa10.69□□□□□ -0.7
SCARB2-226ENST00000640916 PLEKHF1Q96S99 279 aa10.69□□□□□ -0.7
SCARB2-226ENST00000640916 ARHGAP39Q9C0H5 1083 aa10.69□□□□□ -0.7
SCARB2-226ENST00000640916 ANKIB1Q9P2G1 1089 aa10.69□□□□□ -0.7
SCARB2-226ENST00000640916 NUDCQ9Y266 331 aa10.69□□□□□ -0.7
SCARB2-226ENST00000640916 VCANP13611 3396 aa10.69□□□□□ -0.7
SCARB2-226ENST00000640916 ATP5J2-PTCD1G3V325 749 aa10.68□□□□□ -0.7
SCARB2-226ENST00000640916 IRS4O14654 1257 aaPredicted RBP10.68□□□□□ -0.7
SCARB2-226ENST00000640916 ZBTB7BO15156 539 aaPredicted RBP10.68□□□□□ -0.7
SCARB2-226ENST00000640916 MTFR1Q15390 333 aa10.68□□□□□ -0.7
SCARB2-226ENST00000640916 APOBEC3FQ8IUX4 373 aaKnown RBP10.68□□□□□ -0.7
SCARB2-226ENST00000640916 CFAP53Q96M91 514 aa10.68□□□□□ -0.7
SCARB2-226ENST00000640916 DEFB129Q9H1M3 183 aa10.68□□□□□ -0.7
SCARB2-226ENST00000640916 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.68□□□□□ -0.7
SCARB2-226ENST00000640916 COL1A1P02452 1464 aaPredicted RBP10.68□□□□□ -0.7
SCARB2-226ENST00000640916 SPEF2Q9C093 1822 aa10.68□□□□□ -0.7
SCARB2-226ENST00000640916 A0A1W2PPC1 479 aa10.67□□□□□ -0.7
SCARB2-226ENST00000640916 UNCXA6NJT0 531 aa10.67□□□□□ -0.7
SCARB2-226ENST00000640916 USP2O75604 605 aaPredicted RBP10.67□□□□□ -0.7
SCARB2-226ENST00000640916 PLBD2Q8NHP8 589 aa10.67□□□□□ -0.7
SCARB2-226ENST00000640916 XDHP47989 1333 aa10.66□□□□□ -0.7
SCARB2-226ENST00000640916 AOX1Q06278 1338 aa10.66□□□□□ -0.7
SCARB2-226ENST00000640916 ATP2B4P23634 1241 aa10.66□□□□□ -0.7
SCARB2-226ENST00000640916 PPP2R1AP30153 589 aa10.66□□□□□ -0.7
SCARB2-226ENST00000640916 STRIP1Q5VSL9 837 aa10.66□□□□□ -0.7
SCARB2-226ENST00000640916 OTUD7BQ6GQQ9 843 aa10.66□□□□□ -0.7
SCARB2-226ENST00000640916 TXNRD3Q86VQ6 643 aa10.66□□□□□ -0.7
SCARB2-226ENST00000640916 OGFOD1Q8N543 542 aa10.66□□□□□ -0.7
SCARB2-226ENST00000640916 BRI3BPQ8WY22 251 aa10.66□□□□□ -0.7
SCARB2-226ENST00000640916 PCDHAC2Q9Y5I4 1007 aa10.66□□□□□ -0.7
SCARB2-226ENST00000640916 MED23Q9ULK4 1368 aa10.65□□□□□ -0.7
SCARB2-226ENST00000640916 CTGFP29279 349 aa10.65□□□□□ -0.7
SCARB2-226ENST00000640916 MMP14P50281 582 aa10.65□□□□□ -0.7
SCARB2-226ENST00000640916 TRIM28Q13263 835 aaKnown RBP10.65□□□□□ -0.7
SCARB2-226ENST00000640916 PDAP1Q13442 181 aaKnown RBP10.65□□□□□ -0.7
SCARB2-226ENST00000640916 NFE2L2Q16236 605 aa10.65□□□□□ -0.7
SCARB2-226ENST00000640916 KRT24Q2M2I5 525 aa10.65□□□□□ -0.7
SCARB2-226ENST00000640916 NBPF12Q5TAG4 269 aaPredicted RBP10.65□□□□□ -0.7
SCARB2-226ENST00000640916 ANKRD13DQ6ZTN6 518 aa10.65□□□□□ -0.7
SCARB2-226ENST00000640916 TSPYL4Q9UJ04 414 aa10.65□□□□□ -0.7
SCARB2-226ENST00000640916 EYSQ5T1H1 3165 aa10.65□□□□□ -0.7
SCARB2-226ENST00000640916 SPTBN5Q9NRC6 3674 aaKnown RBP10.64□□□□□ -0.71
SCARB2-226ENST00000640916 MYO3BQ8WXR4 1341 aa10.64□□□□□ -0.71
SCARB2-226ENST00000640916 TIE1P35590 1138 aa10.64□□□□□ -0.71
SCARB2-226ENST00000640916 GJA8P48165 433 aa10.64□□□□□ -0.71
SCARB2-226ENST00000640916 Q7L0L9 218 aa10.64□□□□□ -0.71
SCARB2-226ENST00000640916 KIAA0825Q8IV33 1275 aa10.64□□□□□ -0.71
SCARB2-226ENST00000640916 FAM43AQ8N2R8 423 aa10.64□□□□□ -0.71
SCARB2-226ENST00000640916 CHPF2Q9P2E5 772 aa10.64□□□□□ -0.71
SCARB2-226ENST00000640916 STAP2Q9UGK3 403 aa10.64□□□□□ -0.71
SCARB2-226ENST00000640916 STXBP5LQ9Y2K9 1186 aa10.64□□□□□ -0.71
SCARB2-226ENST00000640916 PPP1R12BO60237 982 aaPredicted RBP10.63□□□□□ -0.71
SCARB2-226ENST00000640916 LACTBP83111 547 aaPredicted RBP10.63□□□□□ -0.71
SCARB2-226ENST00000640916 TAF1CQ15572 869 aaPredicted RBP10.63□□□□□ -0.71
SCARB2-226ENST00000640916 GPR153Q6NV75 609 aa10.63□□□□□ -0.71
SCARB2-226ENST00000640916 HS6ST3Q8IZP7 471 aa10.63□□□□□ -0.71
SCARB2-226ENST00000640916 ZBTB38Q8NAP3 1195 aaPredicted RBP10.63□□□□□ -0.71
SCARB2-226ENST00000640916 OPTNQ96CV9 577 aa10.63□□□□□ -0.71
SCARB2-226ENST00000640916 MTMR10Q9NXD2 777 aa10.63□□□□□ -0.71
SCARB2-226ENST00000640916 ZNF804BA4D1E1 1349 aa10.62□□□□□ -0.71
SCARB2-226ENST00000640916 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.62□□□□□ -0.71
SCARB2-226ENST00000640916 GJB1P08034 283 aa10.62□□□□□ -0.71
SCARB2-226ENST00000640916 KLRK1P26718 216 aa10.62□□□□□ -0.71
SCARB2-226ENST00000640916 ARHGEF6Q15052 776 aa10.62□□□□□ -0.71
SCARB2-226ENST00000640916 TTLL5Q6EMB2 1281 aa10.62□□□□□ -0.71
SCARB2-226ENST00000640916 ASTLQ6HA08 431 aaPredicted RBP10.62□□□□□ -0.71
SCARB2-226ENST00000640916 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.62□□□□□ -0.71
SCARB2-226ENST00000640916 ANKRD13AQ8IZ07 590 aa10.62□□□□□ -0.71
SCARB2-226ENST00000640916 CERS5Q8N5B7 392 aa10.62□□□□□ -0.71
SCARB2-226ENST00000640916 DEFB123Q8N688 67 aa10.62□□□□□ -0.71
SCARB2-226ENST00000640916 MTMR14Q8NCE2 650 aa10.62□□□□□ -0.71
SCARB2-226ENST00000640916 JARID2Q92833 1246 aaPredicted RBP10.62□□□□□ -0.71
SCARB2-226ENST00000640916 ZFP91Q96JP5 570 aaPredicted RBP10.62□□□□□ -0.71
SCARB2-226ENST00000640916 CCDC85AQ96PX6 553 aaPredicted RBP10.62□□□□□ -0.71
SCARB2-226ENST00000640916 HTATIP2Q9BUP3 242 aa10.62□□□□□ -0.71
SCARB2-226ENST00000640916 COA1Q9GZY4 146 aa10.62□□□□□ -0.71
SCARB2-226ENST00000640916 ELP3Q9H9T3 547 aa10.62□□□□□ -0.71
SCARB2-226ENST00000640916 ZFYVE28Q9HCC9 887 aa10.62□□□□□ -0.71
SCARB2-226ENST00000640916 BMP2KQ9NSY1 1161 aaPredicted RBP10.62□□□□□ -0.71
SCARB2-226ENST00000640916 MINPP1Q9UNW1 487 aa10.62□□□□□ -0.71
SCARB2-226ENST00000640916 PPP2R3BQ9Y5P8 575 aa10.62□□□□□ -0.71
SCARB2-226ENST00000640916 NR2E3Q9Y5X4 410 aa10.62□□□□□ -0.71
SCARB2-226ENST00000640916 MYH3P11055 1940 aa10.62□□□□□ -0.71
SCARB2-226ENST00000640916 TLR2O60603 784 aa10.61□□□□□ -0.71
SCARB2-226ENST00000640916 IREB2P48200 963 aaKnown RBP10.61□□□□□ -0.71
SCARB2-226ENST00000640916 PSEN1P49768 467 aa10.61□□□□□ -0.71
SCARB2-226ENST00000640916 SUPT20HL1Q3ZLR7 823 aa10.61□□□□□ -0.71
SCARB2-226ENST00000640916 FBXW7Q969H0 707 aa10.61□□□□□ -0.71
SCARB2-226ENST00000640916 PRMT6Q96LA8 375 aaPredicted RBP10.61□□□□□ -0.71
SCARB2-226ENST00000640916 BABAM1Q9NWV8 329 aa10.61□□□□□ -0.71
SCARB2-226ENST00000640916 MGAMO43451 1857 aa10.6□□□□□ -0.71
SCARB2-226ENST00000640916 CCL15-CCL14A0A0B4J2E2 113 aa10.6□□□□□ -0.71
SCARB2-226ENST00000640916 CLRN2A0PK11 232 aa10.6□□□□□ -0.71
SCARB2-226ENST00000640916 PDE8AO60658 829 aa10.6□□□□□ -0.71
SCARB2-226ENST00000640916 CCL5P13501 91 aa10.6□□□□□ -0.71
SCARB2-226ENST00000640916 CCT4P50991 539 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms