RNA–Protein interactions for RNA: ENST00000640888.1

LIAS-222, Transcript of lipoic acid synthetase, human

APPRIS P1 TSL 1 (best) BASIC

Gene LIAS, Length 4,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LIAS-222	ENST00000640888	TRAPPC3L	Q5T215	181 aa		11.49	□□□□□ -0.57
LIAS-222	ENST00000640888	SPATA32	Q96LK8	384 aa		11.49	□□□□□ -0.57
LIAS-222	ENST00000640888	LAMB4	A4D0S4	1761 aa		11.48	□□□□□ -0.57
LIAS-222	ENST00000640888	JAK2	O60674	1132 aa		11.48	□□□□□ -0.57
LIAS-222	ENST00000640888	PIH1D3	Q9NQM4	214 aa	Known RBP	11.48	□□□□□ -0.57
LIAS-222	ENST00000640888	TFIP11	Q9UBB9	837 aa	Known RBP	11.48	□□□□□ -0.57
LIAS-222	ENST00000640888	KLF18	A0A0U1RQI7	1052 aa		11.48	□□□□□ -0.57
LIAS-222	ENST00000640888	CYP7A1	P22680	504 aa		11.48	□□□□□ -0.57
LIAS-222	ENST00000640888	GUCY1B3	Q02153	619 aa		11.48	□□□□□ -0.57
LIAS-222	ENST00000640888	TOB2	Q14106	344 aa	Predicted RBP	11.48	□□□□□ -0.57
LIAS-222	ENST00000640888	SART3	Q15020	963 aa	Known RBP	11.48	□□□□□ -0.57
LIAS-222	ENST00000640888	TICAM2	Q86XR7	235 aa		11.48	□□□□□ -0.57
LIAS-222	ENST00000640888	MIGA1	Q8NAN2	632 aa		11.48	□□□□□ -0.57
LIAS-222	ENST00000640888	GTF3C6	Q969F1	213 aa		11.48	□□□□□ -0.57
LIAS-222	ENST00000640888	IL17RA	Q96F46	866 aa		11.48	□□□□□ -0.57
LIAS-222	ENST00000640888	ANKIB1	Q9P2G1	1089 aa		11.48	□□□□□ -0.57
LIAS-222	ENST00000640888	SF3A1	Q15459	793 aa	Known RBP	11.48	□□□□□ -0.57
LIAS-222	ENST00000640888	TSPY26P	Q9H489	355 aa		11.48	□□□□□ -0.57
LIAS-222	ENST00000640888	MTMR6	Q9Y217	621 aa		11.48	□□□□□ -0.57
LIAS-222	ENST00000640888	NTSR2	O95665	410 aa		11.47	□□□□□ -0.57
LIAS-222	ENST00000640888	ADD2	P35612	726 aa		11.47	□□□□□ -0.57
LIAS-222	ENST00000640888	TSGA10IP	Q3SY00	556 aa		11.47	□□□□□ -0.57
LIAS-222	ENST00000640888	WWC3	Q9ULE0	1092 aa		11.47	□□□□□ -0.57
LIAS-222	ENST00000640888	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.47	□□□□□ -0.57
LIAS-222	ENST00000640888	MINDY4B	A8MYZ0	360 aa		11.47	□□□□□ -0.57
LIAS-222	ENST00000640888	UBE2H	P62256	183 aa		11.47	□□□□□ -0.57
LIAS-222	ENST00000640888	CDC37L1	Q7L3B6	337 aa		11.47	□□□□□ -0.57
LIAS-222	ENST00000640888	GPT2	Q8TD30	523 aa		11.47	□□□□□ -0.57
LIAS-222	ENST00000640888	ABCA3	Q99758	1704 aa		11.47	□□□□□ -0.57
LIAS-222	ENST00000640888	ARMT1	Q9H993	441 aa		11.47	□□□□□ -0.57
LIAS-222	ENST00000640888	NCOA5	Q9HCD5	579 aa	Known RBP	11.47	□□□□□ -0.57
LIAS-222	ENST00000640888	SLC4A4	Q9Y6R1	1079 aa		11.47	□□□□□ -0.57
LIAS-222	ENST00000640888	AFF2	P51816	1311 aa		11.47	□□□□□ -0.57
LIAS-222	ENST00000640888	RASGRF1	Q13972	1273 aa		11.47	□□□□□ -0.57
LIAS-222	ENST00000640888	TRPC5	Q9UL62	973 aa	Predicted RBP	11.47	□□□□□ -0.57
LIAS-222	ENST00000640888	SPATA31A6	Q5VVP1	1343 aa		11.46	□□□□□ -0.57
LIAS-222	ENST00000640888	PTPDC1	A2A3K4	754 aa		11.46	□□□□□ -0.57
LIAS-222	ENST00000640888	GADD45B	O75293	160 aa	Predicted RBP	11.46	□□□□□ -0.57
LIAS-222	ENST00000640888	RPS6KA4	O75676	772 aa		11.46	□□□□□ -0.57
LIAS-222	ENST00000640888	GYG1	P46976	350 aa		11.46	□□□□□ -0.57
LIAS-222	ENST00000640888	UBE3C	Q15386	1083 aa		11.46	□□□□□ -0.57
LIAS-222	ENST00000640888	ZRSR1	Q15695	479 aa	Known RBP	11.46	□□□□□ -0.57
LIAS-222	ENST00000640888	FAM173B	Q6P4H8	233 aa		11.46	□□□□□ -0.57
LIAS-222	ENST00000640888	TRIM29	Q14134	588 aa		11.46	□□□□□ -0.57
LIAS-222	ENST00000640888	TBC1D9B	Q66K14	1250 aa		11.46	□□□□□ -0.57
LIAS-222	ENST00000640888	STOX1	Q6ZVD7	989 aa		11.46	□□□□□ -0.57
LIAS-222	ENST00000640888	GJD4	Q96KN9	370 aa	Predicted RBP	11.46	□□□□□ -0.57
LIAS-222	ENST00000640888	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.46	□□□□□ -0.57
LIAS-222	ENST00000640888	CCDC69	A6NI79	296 aa		11.46	□□□□□ -0.58
LIAS-222	ENST00000640888	SEPT12	Q8IYM1	358 aa		11.46	□□□□□ -0.58
LIAS-222	ENST00000640888	RPS8	P62241	208 aa	Known RBP	11.45	□□□□□ -0.58
LIAS-222	ENST00000640888	RPGR	Q92834	1020 aa	Known RBP	11.45	□□□□□ -0.58
LIAS-222	ENST00000640888	NARF	Q9UHQ1	456 aa		11.45	□□□□□ -0.58
LIAS-222	ENST00000640888	FSD2	A1L4K1	749 aa		11.45	□□□□□ -0.58
LIAS-222	ENST00000640888	CCDC183	Q5T5S1	534 aa		11.45	□□□□□ -0.58
LIAS-222	ENST00000640888	GAS2L3	Q86XJ1	694 aa		11.45	□□□□□ -0.58
LIAS-222	ENST00000640888	NOL10	Q9BSC4	688 aa	Known RBP	11.45	□□□□□ -0.58
LIAS-222	ENST00000640888	ABCC12	Q96J65	1359 aa		11.45	□□□□□ -0.58
LIAS-222	ENST00000640888	IFIT3	O14879	490 aa	Known RBP	11.45	□□□□□ -0.58
LIAS-222	ENST00000640888	TMEM67	Q5HYA8	995 aa		11.45	□□□□□ -0.58
LIAS-222	ENST00000640888	FAM196A	Q6ZSG2	479 aa		11.45	□□□□□ -0.58
LIAS-222	ENST00000640888	MFSD6	Q6ZSS7	791 aa		11.45	□□□□□ -0.58
LIAS-222	ENST00000640888	MICU3	Q86XE3	530 aa		11.45	□□□□□ -0.58
LIAS-222	ENST00000640888	CNBD1	Q8NA66	436 aa		11.45	□□□□□ -0.58
LIAS-222	ENST00000640888	TMEM63C	Q9P1W3	806 aa		11.45	□□□□□ -0.58
LIAS-222	ENST00000640888	CFAP45	Q9UL16	551 aa		11.45	□□□□□ -0.58
LIAS-222	ENST00000640888	LETM1	O95202	739 aa	Predicted RBP	11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	SCRN1	Q12765	414 aa		11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	PTF1A	Q7RTS3	328 aa		11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	ZNF396	Q96N95	335 aa	Predicted RBP	11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	TMX4	Q9H1E5	349 aa	Predicted RBP	11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	ORC3	Q9UBD5	711 aa	Predicted RBP	11.44	□□□□□ -0.58
LIAS-222	ENST00000640888		A0A0G2JLW4	131 aa		11.44	□□□□□ -0.58
LIAS-222	ENST00000640888		B4E1Z4	1266 aa		11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	CCDC144CP	Q8IYA2	1237 aa		11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	C8orf76	Q96K31	380 aa		11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	UBAC1	Q9BSL1	405 aa		11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	QTRT2	Q9H974	415 aa	Known RBP	11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	PFKFB2	O60825	505 aa		11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	CDKL5	O76039	1030 aa		11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	ARID4A	P29374	1257 aa	Predicted RBP	11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	HSPA1L	P34931	641 aa		11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	NAA16	Q6N069	864 aa	Predicted RBP	11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	LLPH	Q9BRT6	129 aa	Known RBP	11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	ANKRD2	Q9GZV1	360 aa		11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	TFCP2L1	Q9NZI6	479 aa		11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	GNAT2	P19087	354 aa		11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	AKAP17A	Q02040	695 aa	Known RBP	11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	LRSAM1	Q6UWE0	723 aa		11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	JAG2	Q9Y219	1238 aa		11.44	□□□□□ -0.58
LIAS-222	ENST00000640888	CNTNAP4	Q9C0A0	1308 aa		11.43	□□□□□ -0.58
LIAS-222	ENST00000640888	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.43	□□□□□ -0.58
LIAS-222	ENST00000640888	MAGEB6P1	A0A0J9YX57	407 aa		11.43	□□□□□ -0.58
LIAS-222	ENST00000640888	METAP2	P50579	478 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
LIAS-222	ENST00000640888	COL9A3	Q14050	684 aa	Predicted RBP	11.43	□□□□□ -0.58
LIAS-222	ENST00000640888	CCDC73	Q6ZRK6	1079 aa		11.43	□□□□□ -0.58
LIAS-222	ENST00000640888	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.43	□□□□□ -0.58
LIAS-222	ENST00000640888	CERK	Q8TCT0	537 aa		11.43	□□□□□ -0.58
LIAS-222	ENST00000640888	NUP133	Q8WUM0	1156 aa		11.43	□□□□□ -0.58
LIAS-222	ENST00000640888	DENND2A	Q9ULE3	1009 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms