RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 GBP2P32456 591 aaPredicted RBP10.69□□□□□ -0.7
CACNA1D-230ENST00000640483 BMP2KLQ5H9B9 411 aa10.69□□□□□ -0.7
CACNA1D-230ENST00000640483 SMCR8Q8TEV9 937 aaPredicted RBP10.69□□□□□ -0.7
CACNA1D-230ENST00000640483 EXOC1Q9NV70 894 aa10.69□□□□□ -0.7
CACNA1D-230ENST00000640483 PUF60Q9UHX1 559 aaKnown RBP10.69□□□□□ -0.7
CACNA1D-230ENST00000640483 CTAGE5O15320 804 aa10.69□□□□□ -0.7
CACNA1D-230ENST00000640483 RBM25P49756 843 aaKnown RBP10.69□□□□□ -0.7
CACNA1D-230ENST00000640483 GJB2P29033 226 aa10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 IL13P35225 146 aa10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 MTIF2P46199 727 aaKnown RBP10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 CCDC112Q8NEF3 446 aa10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 PHACTR3Q96KR7 559 aa10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 PHACTR2O75167 634 aa10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 CAMK4Q16566 473 aa10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 MROH5Q6ZUA9 1318 aa10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 BACH1O14867 736 aa10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 GNA11P29992 359 aa10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 USP8P40818 1118 aa10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 PABPC4Q13310 644 aaKnown RBP eCLIP10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 BRF1Q92994 677 aa10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 TCHPQ9BT92 498 aa10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 ZBED4O75132 1171 aa10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 IRX3P78415 501 aaPredicted RBP10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 ALG1Q9BT22 464 aa10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 AS3MTQ9HBK9 375 aa10.68□□□□□ -0.7
CACNA1D-230ENST00000640483 UNC5CLQ8IV45 518 aa10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 CCDC24Q8N4L8 307 aa10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 RBM28Q9NW13 759 aaKnown RBP10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 RMND1Q9NWS8 449 aa10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 DIP2CQ9Y2E4 1556 aa10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 LGR6Q9HBX8 967 aa10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 TET3O43151 1660 aa10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 KRT13P13646 458 aa10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 NMIQ13287 307 aaPredicted RBP10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 GOPCQ9HD26 462 aa10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 INO80Q9ULG1 1556 aaPredicted RBP10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 MBD4O95243 580 aa10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 PDE1AP54750 535 aa10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 FSIP1Q8NA03 581 aa10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 RBM8AQ9Y5S9 174 aaKnown RBP10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 ZNF335Q9H4Z2 1342 aaPredicted RBP10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 HDAC1Q13547 482 aaPredicted RBP10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 ARHGAP29Q52LW3 1261 aa10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 TBC1D9Q6ZT07 1266 aa10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 CARD14Q9BXL6 1004 aa10.67□□□□□ -0.7
CACNA1D-230ENST00000640483 KAT6BQ8WYB5 2073 aa10.66□□□□□ -0.7
CACNA1D-230ENST00000640483 EZRP15311 586 aaKnown RBP10.66□□□□□ -0.7
CACNA1D-230ENST00000640483 CNGA1P29973 690 aa10.66□□□□□ -0.7
CACNA1D-230ENST00000640483 SULF1Q8IWU6 871 aa10.66□□□□□ -0.7
CACNA1D-230ENST00000640483 CPLX3Q8WVH0 158 aa10.66□□□□□ -0.7
CACNA1D-230ENST00000640483 PHKG2P15735 406 aa10.66□□□□□ -0.7
CACNA1D-230ENST00000640483 LPIN2Q92539 896 aa10.66□□□□□ -0.7
CACNA1D-230ENST00000640483 CARD10Q9BWT7 1032 aa10.66□□□□□ -0.7
CACNA1D-230ENST00000640483 IMPG2Q9BZV3 1241 aa10.66□□□□□ -0.7
CACNA1D-230ENST00000640483 VAMP4O75379 141 aa10.66□□□□□ -0.7
CACNA1D-230ENST00000640483 STAT6P42226 847 aa10.66□□□□□ -0.7
CACNA1D-230ENST00000640483 NUCB1Q02818 461 aa10.66□□□□□ -0.7
CACNA1D-230ENST00000640483 TESK2Q96S53 571 aa10.66□□□□□ -0.7
CACNA1D-230ENST00000640483 A2ML1A8K2U0 1454 aa10.66□□□□□ -0.7
CACNA1D-230ENST00000640483 CCDC172P0C7W6 258 aa10.66□□□□□ -0.7
CACNA1D-230ENST00000640483 CTNNA2P26232 953 aa10.66□□□□□ -0.7
CACNA1D-230ENST00000640483 TDRD12Q587J7 1177 aaKnown RBP10.66□□□□□ -0.7
CACNA1D-230ENST00000640483 A0A1B0GUL7 405 aa10.65□□□□□ -0.7
CACNA1D-230ENST00000640483 ATP2B4P23634 1241 aa10.65□□□□□ -0.7
CACNA1D-230ENST00000640483 DCAF15Q66K64 600 aa10.65□□□□□ -0.7
CACNA1D-230ENST00000640483 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.65□□□□□ -0.7
CACNA1D-230ENST00000640483 SYNCQ9H7C4 482 aa10.65□□□□□ -0.7
CACNA1D-230ENST00000640483 ZSCAN16Q9H4T2 348 aaPredicted RBP10.65□□□□□ -0.7
CACNA1D-230ENST00000640483 HELLSQ9NRZ9 838 aa10.65□□□□□ -0.7
CACNA1D-230ENST00000640483 ENOX2Q16206 610 aaKnown RBP10.65□□□□□ -0.7
CACNA1D-230ENST00000640483 KRT24Q2M2I5 525 aa10.65□□□□□ -0.7
CACNA1D-230ENST00000640483 LARP6Q9BRS8 491 aaKnown RBP10.65□□□□□ -0.7
CACNA1D-230ENST00000640483 NR1I2O75469 434 aa10.65□□□□□ -0.71
CACNA1D-230ENST00000640483 RPS8P62241 208 aaKnown RBP10.65□□□□□ -0.71
CACNA1D-230ENST00000640483 SP4Q02446 784 aa10.65□□□□□ -0.71
CACNA1D-230ENST00000640483 FAM43AQ8N2R8 423 aa10.65□□□□□ -0.71
CACNA1D-230ENST00000640483 PSMD1Q99460 953 aa10.65□□□□□ -0.71
CACNA1D-230ENST00000640483 KRT79Q5XKE5 535 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 SEPT12Q8IYM1 358 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 XAGE2Q96GT9 111 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 LMTK2Q8IWU2 1503 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 CROCC2H7BZ55 1655 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 PARD3Q8TEW0 1356 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 FAM13AO94988 1023 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 YEATS4O95619 227 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 KRT2P35908 639 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 CCDC102BQ68D86 513 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 TSPYL6Q8N831 410 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 ZBTB21Q9ULJ3 1066 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 KIAA0232Q92628 1395 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 SBNO2Q9Y2G9 1366 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 CCDC171Q6TFL3 1326 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 Q6ZUG5 572 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 FAM177A1Q8N128 213 aaPredicted RBP10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 TEKT1Q969V4 418 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 ZNF496Q96IT1 587 aaPredicted RBP10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 NUP88Q99567 741 aaPredicted RBP10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 PTPRTO14522 1441 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 LOC102724428A0A0B4J2F2 783 aa10.64□□□□□ -0.71
CACNA1D-230ENST00000640483 NOP56O00567 594 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms