RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 NUDT7P0C024 238 aa9.76□□□□□ -0.85
SCARB2-209ENST00000638409 TKFCQ3LXA3 575 aa9.76□□□□□ -0.85
SCARB2-209ENST00000638409 SYCP2LQ5T4T6 812 aa9.76□□□□□ -0.85
SCARB2-209ENST00000638409 NUTM2GQ5VZR2 741 aa9.76□□□□□ -0.85
SCARB2-209ENST00000638409 HNRNPLLQ8WVV9 542 aaKnown RBP9.76□□□□□ -0.85
SCARB2-209ENST00000638409 C8orf48Q96LL4 319 aa9.76□□□□□ -0.85
SCARB2-209ENST00000638409 AK5Q9Y6K8 562 aa9.76□□□□□ -0.85
SCARB2-209ENST00000638409 NWD2Q9ULI1 1742 aa9.76□□□□□ -0.85
SCARB2-209ENST00000638409 GNALP38405 381 aa9.75□□□□□ -0.85
SCARB2-209ENST00000638409 LRRC41Q15345 812 aa9.75□□□□□ -0.85
SCARB2-209ENST00000638409 CNPY4Q8N129 248 aa9.75□□□□□ -0.85
SCARB2-209ENST00000638409 SLKQ9H2G2 1235 aaPredicted RBP9.75□□□□□ -0.85
SCARB2-209ENST00000638409 SUPT16HQ9Y5B9 1047 aaKnown RBP9.75□□□□□ -0.85
SCARB2-209ENST00000638409 ABCC6O95255 1503 aa9.75□□□□□ -0.85
SCARB2-209ENST00000638409 PTMSP20962 102 aa9.75□□□□□ -0.85
SCARB2-209ENST00000638409 NPC1L1Q9UHC9 1359 aa9.75□□□□□ -0.85
SCARB2-209ENST00000638409 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.75□□□□□ -0.85
SCARB2-209ENST00000638409 SLIT2O94813 1529 aa9.75□□□□□ -0.85
SCARB2-209ENST00000638409 TRIM6-TRIM34B2RNG4 842 aa9.75□□□□□ -0.85
SCARB2-209ENST00000638409 MAMSTRQ6ZN01 415 aa9.75□□□□□ -0.85
SCARB2-209ENST00000638409 COG3Q96JB2 828 aa9.75□□□□□ -0.85
SCARB2-209ENST00000638409 TRIM55Q9BYV6 548 aa9.75□□□□□ -0.85
SCARB2-209ENST00000638409 LDHAP00338 332 aaKnown RBP9.74□□□□□ -0.85
SCARB2-209ENST00000638409 MASP1P48740 699 aa9.74□□□□□ -0.85
SCARB2-209ENST00000638409 ORC1Q13415 861 aa9.74□□□□□ -0.85
SCARB2-209ENST00000638409 RNF19BQ6ZMZ0 732 aa9.74□□□□□ -0.85
SCARB2-209ENST00000638409 FRMD6Q96NE9 622 aa9.74□□□□□ -0.85
SCARB2-209ENST00000638409 CITED4Q96RK1 184 aa9.74□□□□□ -0.85
SCARB2-209ENST00000638409 PLCH1Q4KWH8 1693 aa9.74□□□□□ -0.85
SCARB2-209ENST00000638409 LMO7Q8WWI1 1683 aa9.74□□□□□ -0.85
SCARB2-209ENST00000638409 COL18A1P39060 1754 aa9.74□□□□□ -0.85
SCARB2-209ENST00000638409 F6X3S4 739 aa9.74□□□□□ -0.85
SCARB2-209ENST00000638409 ADAMTS2O95450 1211 aa9.74□□□□□ -0.85
SCARB2-209ENST00000638409 PTPN12Q05209 780 aaKnown RBP9.74□□□□□ -0.85
SCARB2-209ENST00000638409 MEX3CQ5U5Q3 659 aaKnown RBP9.74□□□□□ -0.85
SCARB2-209ENST00000638409 ANP32EQ9BTT0 268 aa9.74□□□□□ -0.85
SCARB2-209ENST00000638409 TMX4Q9H1E5 349 aaPredicted RBP9.74□□□□□ -0.85
SCARB2-209ENST00000638409 KNSTRNQ9Y448 316 aa9.74□□□□□ -0.85
SCARB2-209ENST00000638409 FAM83GA6ND36 823 aa9.73□□□□□ -0.85
SCARB2-209ENST00000638409 CTHP32929 405 aa9.73□□□□□ -0.85
SCARB2-209ENST00000638409 ATP6V1AP38606 617 aa9.73□□□□□ -0.85
SCARB2-209ENST00000638409 USP5P45974 858 aa9.73□□□□□ -0.85
SCARB2-209ENST00000638409 NBPF6Q5VWK0 638 aa9.73□□□□□ -0.85
SCARB2-209ENST00000638409 ALG1LQ6GMV1 187 aa9.73□□□□□ -0.85
SCARB2-209ENST00000638409 ARHGEF25Q86VW2 580 aa9.73□□□□□ -0.85
SCARB2-209ENST00000638409 ALKBH8Q96BT7 664 aaKnown RBP9.73□□□□□ -0.85
SCARB2-209ENST00000638409 NBPF4Q96M43 638 aa9.73□□□□□ -0.85
SCARB2-209ENST00000638409 HOMER2Q9NSB8 354 aa9.73□□□□□ -0.85
SCARB2-209ENST00000638409 KIAA0232Q92628 1395 aa9.73□□□□□ -0.85
SCARB2-209ENST00000638409 CFHP08603 1231 aa9.73□□□□□ -0.85
SCARB2-209ENST00000638409 LMOD3Q0VAK6 560 aa9.73□□□□□ -0.85
SCARB2-209ENST00000638409 GRIPAP1Q4V328 841 aa9.73□□□□□ -0.85
SCARB2-209ENST00000638409 SLC39A13Q96H72 371 aa9.73□□□□□ -0.85
SCARB2-209ENST00000638409 SLC27A5Q9Y2P5 690 aa9.73□□□□□ -0.85
SCARB2-209ENST00000638409 AATKQ6ZMQ8 1374 aa9.73□□□□□ -0.85
SCARB2-209ENST00000638409 NRAPQ86VF7 1730 aa9.73□□□□□ -0.85
SCARB2-209ENST00000638409 BCL9LQ86UU0 1499 aa9.72□□□□□ -0.85
SCARB2-209ENST00000638409 ESPNB1AK53 854 aa9.72□□□□□ -0.85
SCARB2-209ENST00000638409 STAU1O95793 577 aaKnown RBP9.72□□□□□ -0.85
SCARB2-209ENST00000638409 SCG3Q8WXD2 468 aaKnown RBP9.72□□□□□ -0.85
SCARB2-209ENST00000638409 DNAJC7Q99615 494 aa9.72□□□□□ -0.85
SCARB2-209ENST00000638409 GGNBP2Q9H3C7 697 aa9.72□□□□□ -0.85
SCARB2-209ENST00000638409 SFMBT1Q9UHJ3 866 aa9.72□□□□□ -0.85
SCARB2-209ENST00000638409 KLF4O43474 513 aa9.72□□□□□ -0.85
SCARB2-209ENST00000638409 NASPP49321 788 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-209ENST00000638409 DHX8Q14562 1220 aaKnown RBP9.72□□□□□ -0.85
SCARB2-209ENST00000638409 ZNF772Q68DY9 489 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-209ENST00000638409 PI16Q6UXB8 463 aa9.72□□□□□ -0.85
SCARB2-209ENST00000638409 KIAA0907Q7Z7F0 614 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-209ENST00000638409 PACS2Q86VP3 889 aa9.72□□□□□ -0.85
SCARB2-209ENST00000638409 MKL1Q969V6 931 aa9.72□□□□□ -0.85
SCARB2-209ENST00000638409 NGLY1Q96IV0 654 aa9.72□□□□□ -0.85
SCARB2-209ENST00000638409 TYW1Q9NV66 732 aaKnown RBP9.72□□□□□ -0.85
SCARB2-209ENST00000638409 CNTN3Q9P232 1028 aa9.72□□□□□ -0.85
SCARB2-209ENST00000638409 RGS17Q9UGC6 210 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-209ENST00000638409 LTN1O94822 1766 aa9.72□□□□□ -0.85
SCARB2-209ENST00000638409 OPLAHO14841 1288 aa9.71□□□□□ -0.85
SCARB2-209ENST00000638409 RAB33AQ14088 237 aa9.71□□□□□ -0.85
SCARB2-209ENST00000638409 KRBA2Q6ZNG9 492 aa9.71□□□□□ -0.85
SCARB2-209ENST00000638409 FAM43BQ6ZT52 329 aaPredicted RBP9.71□□□□□ -0.85
SCARB2-209ENST00000638409 KIF24Q5T7B8 1368 aa9.71□□□□□ -0.86
SCARB2-209ENST00000638409 AFF2P51816 1311 aa9.71□□□□□ -0.86
SCARB2-209ENST00000638409 HMGB1P1B2RPK0 211 aaPredicted RBP9.71□□□□□ -0.86
SCARB2-209ENST00000638409 COLQQ9Y215 455 aaPredicted RBP9.71□□□□□ -0.86
SCARB2-209ENST00000638409 BDNFP23560 247 aa9.7□□□□□ -0.86
SCARB2-209ENST00000638409 PTK2Q05397 1052 aa9.7□□□□□ -0.86
SCARB2-209ENST00000638409 BRDTQ58F21 947 aaPredicted RBP9.7□□□□□ -0.86
SCARB2-209ENST00000638409 C16orf46Q6P387 395 aa9.7□□□□□ -0.86
SCARB2-209ENST00000638409 APPBP2Q92624 585 aa9.7□□□□□ -0.86
SCARB2-209ENST00000638409 COL26A1Q96A83 441 aa9.7□□□□□ -0.86
SCARB2-209ENST00000638409 EMID1Q96A84 441 aaPredicted RBP9.7□□□□□ -0.86
SCARB2-209ENST00000638409 PRDM11Q9NQV5 511 aa9.7□□□□□ -0.86
SCARB2-209ENST00000638409 BLOC1S3Q6QNY0 202 aa9.7□□□□□ -0.86
SCARB2-209ENST00000638409 CHRDL2Q6WN34 429 aa9.7□□□□□ -0.86
SCARB2-209ENST00000638409 UNC5CLQ8IV45 518 aa9.7□□□□□ -0.86
SCARB2-209ENST00000638409 PIP4P2Q8N4L2 257 aa9.7□□□□□ -0.86
SCARB2-209ENST00000638409 POLIQ9UNA4 740 aa9.7□□□□□ -0.86
SCARB2-209ENST00000638409 CAMTA1Q9Y6Y1 1673 aa9.7□□□□□ -0.86
SCARB2-209ENST00000638409 ATRNO75882 1429 aa9.7□□□□□ -0.86
SCARB2-209ENST00000638409 CEP89Q96ST8 783 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms