RNA–Protein interactions for RNA: ENST00000638049.1

LGI1-230, Transcript of leucine rich glioma inactivated 1, humanhuman

TSL 5

Gene LGI1, Length 2,072 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1-230ENST00000638049 HOXB4P17483 251 aaPredicted RBP6.3□□□□□ -1.4
LGI1-230ENST00000638049 HGSNATQ68CP4 663 aa6.3□□□□□ -1.4
LGI1-230ENST00000638049 NEDD1Q8NHV4 660 aa6.3□□□□□ -1.4
LGI1-230ENST00000638049 TRIM56Q9BRZ2 755 aaKnown RBP6.3□□□□□ -1.4
LGI1-230ENST00000638049 SCAMP3O14828 347 aaKnown RBP6.29□□□□□ -1.4
LGI1-230ENST00000638049 CDC27P30260 824 aa6.29□□□□□ -1.4
LGI1-230ENST00000638049 ITGAEP38570 1179 aa6.29□□□□□ -1.4
LGI1-230ENST00000638049 MAP3K10Q02779 954 aa6.29□□□□□ -1.4
LGI1-230ENST00000638049 COL9A3Q14050 684 aaPredicted RBP6.29□□□□□ -1.4
LGI1-230ENST00000638049 ZNF423Q2M1K9 1284 aa6.29□□□□□ -1.4
LGI1-230ENST00000638049 KANK3Q6NY19 840 aa6.29□□□□□ -1.4
LGI1-230ENST00000638049 TTC9Q92623 222 aa6.29□□□□□ -1.4
LGI1-230ENST00000638049 ADAM19Q9H013 955 aa6.29□□□□□ -1.4
LGI1-230ENST00000638049 CLEC4MQ9H2X3 399 aaPredicted RBP6.29□□□□□ -1.4
LGI1-230ENST00000638049 LINC01387J3KSC0 135 aa6.29□□□□□ -1.4
LGI1-230ENST00000638049 SEC31BQ9NQW1 1179 aa6.29□□□□□ -1.4
LGI1-230ENST00000638049 LRRC4BQ9NT99 713 aa6.29□□□□□ -1.4
LGI1-230ENST00000638049 CELA3AP09093 270 aa6.28□□□□□ -1.4
LGI1-230ENST00000638049 XRCC5P13010 732 aaKnown RBP6.28□□□□□ -1.4
LGI1-230ENST00000638049 ZNF76P36508 570 aa6.28□□□□□ -1.4
LGI1-230ENST00000638049 DGKGP49619 791 aa6.28□□□□□ -1.4
LGI1-230ENST00000638049 SNRPNP63162 240 aaKnown RBP6.28□□□□□ -1.4
LGI1-230ENST00000638049 PCDH1Q08174 1060 aa6.28□□□□□ -1.4
LGI1-230ENST00000638049 CCDC85BQ15834 202 aaPredicted RBP6.28□□□□□ -1.4
LGI1-230ENST00000638049 DMRTC2Q8IXT2 367 aaPredicted RBP6.28□□□□□ -1.4
LGI1-230ENST00000638049 SLC7A3Q8WY07 619 aa6.28□□□□□ -1.4
LGI1-230ENST00000638049 GPN3Q9UHW5 284 aaPredicted RBP6.28□□□□□ -1.4
LGI1-230ENST00000638049 SOX1O00570 391 aaPredicted RBP6.27□□□□□ -1.41
LGI1-230ENST00000638049 ESRRAP11474 423 aaPredicted RBP6.27□□□□□ -1.41
LGI1-230ENST00000638049 NID1P14543 1247 aa6.27□□□□□ -1.41
LGI1-230ENST00000638049 LORP23490 312 aaPredicted RBP6.27□□□□□ -1.41
LGI1-230ENST00000638049 PTPN12Q05209 780 aaKnown RBP6.27□□□□□ -1.41
LGI1-230ENST00000638049 MAP3K11Q16584 847 aa6.27□□□□□ -1.41
LGI1-230ENST00000638049 MSL1Q68DK7 614 aa6.27□□□□□ -1.41
LGI1-230ENST00000638049 METTL16Q86W50 562 aaKnown RBP6.27□□□□□ -1.41
LGI1-230ENST00000638049 CARD10Q9BWT7 1032 aa6.27□□□□□ -1.41
LGI1-230ENST00000638049 PPME1Q9Y570 386 aa6.27□□□□□ -1.41
LGI1-230ENST00000638049 FAM177BA6PVY3 158 aa6.27□□□□□ -1.41
LGI1-230ENST00000638049 ENC1O14682 589 aa6.27□□□□□ -1.41
LGI1-230ENST00000638049 PAGE1O75459 146 aa6.27□□□□□ -1.41
LGI1-230ENST00000638049 ST13P50502 369 aaKnown RBP6.27□□□□□ -1.41
LGI1-230ENST00000638049 NT5DC4Q86YG4 428 aa6.27□□□□□ -1.41
LGI1-230ENST00000638049 WFDC8Q8IUA0 241 aa6.27□□□□□ -1.41
LGI1-230ENST00000638049 RNF34Q969K3 372 aa6.27□□□□□ -1.41
LGI1-230ENST00000638049 COPRSQ9NQ92 184 aa6.27□□□□□ -1.41
LGI1-230ENST00000638049 PCDHGB7Q9Y5F8 929 aa6.27□□□□□ -1.41
LGI1-230ENST00000638049 WIPF1O43516 503 aa6.26□□□□□ -1.41
LGI1-230ENST00000638049 ARHGEF15O94989 841 aa6.26□□□□□ -1.41
LGI1-230ENST00000638049 IKBKEQ14164 716 aa6.26□□□□□ -1.41
LGI1-230ENST00000638049 ZNF394Q53GI3 561 aa6.26□□□□□ -1.41
LGI1-230ENST00000638049 GGT7Q9UJ14 662 aa6.26□□□□□ -1.41
LGI1-230ENST00000638049 PPM1HQ9ULR3 514 aa6.26□□□□□ -1.41
LGI1-230ENST00000638049 H3BRJ5 948 aa6.26□□□□□ -1.41
LGI1-230ENST00000638049 CABP4P57796 275 aa6.26□□□□□ -1.41
LGI1-230ENST00000638049 NECAB3Q96P71 396 aaPredicted RBP6.26□□□□□ -1.41
LGI1-230ENST00000638049 B3GALT4O96024 378 aa6.25□□□□□ -1.41
LGI1-230ENST00000638049 TRIM11Q96F44 468 aa6.25□□□□□ -1.41
LGI1-230ENST00000638049 PRDM6Q9NQX0 595 aa6.25□□□□□ -1.41
LGI1-230ENST00000638049 ENAMQ9NRM1 1142 aa6.25□□□□□ -1.41
LGI1-230ENST00000638049 METTL5Q9NRN9 209 aaKnown RBP6.25□□□□□ -1.41
LGI1-230ENST00000638049 RPS26P11Q5JNZ5 115 aaPredicted RBP6.24□□□□□ -1.41
LGI1-230ENST00000638049 TRAPPC3LQ5T215 181 aa6.24□□□□□ -1.41
LGI1-230ENST00000638049 HS2ST1Q7LGA3 356 aa6.24□□□□□ -1.41
LGI1-230ENST00000638049 STK35Q8TDR2 534 aa6.24□□□□□ -1.41
LGI1-230ENST00000638049 TMEM39AQ9NV64 488 aa6.24□□□□□ -1.41
LGI1-230ENST00000638049 KBTBD4Q9NVX7 518 aa6.24□□□□□ -1.41
LGI1-230ENST00000638049 TLR6Q9Y2C9 796 aa6.24□□□□□ -1.41
LGI1-230ENST00000638049 FSCN2O14926 492 aa6.24□□□□□ -1.41
LGI1-230ENST00000638049 ERCC5P28715 1186 aaPredicted RBP6.24□□□□□ -1.41
LGI1-230ENST00000638049 RAD51AP2Q09MP3 1159 aa6.24□□□□□ -1.41
LGI1-230ENST00000638049 SETDB1Q15047 1291 aa6.24□□□□□ -1.41
LGI1-230ENST00000638049 RASIP1Q5U651 963 aa6.24□□□□□ -1.41
LGI1-230ENST00000638049 GALNT11Q8NCW6 608 aa6.24□□□□□ -1.41
LGI1-230ENST00000638049 ZFYVE1Q9HBF4 777 aa6.24□□□□□ -1.41
LGI1-230ENST00000638049 DEAF1O75398 565 aaPredicted RBP6.23□□□□□ -1.41
LGI1-230ENST00000638049 RACK1P63244 317 aaKnown RBP6.23□□□□□ -1.41
LGI1-230ENST00000638049 GSTM4Q03013 218 aa6.23□□□□□ -1.41
LGI1-230ENST00000638049 LINC00114Q6XXX2 140 aa6.23□□□□□ -1.41
LGI1-230ENST00000638049 ZSCAN1Q8NBB4 408 aa6.23□□□□□ -1.41
LGI1-230ENST00000638049 KLHDC7BQ96G42 594 aa6.23□□□□□ -1.41
LGI1-230ENST00000638049 NOC4LQ9BVI4 516 aaKnown RBP6.23□□□□□ -1.41
LGI1-230ENST00000638049 CEP44Q9C0F1 390 aa6.23□□□□□ -1.41
LGI1-230ENST00000638049 MINDY4BA8MYZ0 360 aa6.22□□□□□ -1.41
LGI1-230ENST00000638049 FAM229AH3BQW9 127 aa6.22□□□□□ -1.41
LGI1-230ENST00000638049 DDX3YO15523 660 aaKnown RBP6.22□□□□□ -1.41
LGI1-230ENST00000638049 ECEL1O95672 775 aa6.22□□□□□ -1.41
LGI1-230ENST00000638049 PCNX4Q63HM2 1172 aa6.22□□□□□ -1.41
LGI1-230ENST00000638049 ILDR2Q71H61 639 aa6.22□□□□□ -1.41
LGI1-230ENST00000638049 SV2BQ7L1I2 683 aa6.22□□□□□ -1.41
LGI1-230ENST00000638049 ERMP1Q7Z2K6 904 aa6.22□□□□□ -1.41
LGI1-230ENST00000638049 ANKRD24Q8TF21 1146 aa6.22□□□□□ -1.41
LGI1-230ENST00000638049 CNTNAP5Q8WYK1 1306 aa6.22□□□□□ -1.41
LGI1-230ENST00000638049 NLRP12P59046 1061 aa6.22□□□□□ -1.41
LGI1-230ENST00000638049 TTBK2Q6IQ55 1244 aa6.22□□□□□ -1.41
LGI1-230ENST00000638049 FAM117BQ6P1L5 589 aa6.22□□□□□ -1.41
LGI1-230ENST00000638049 USP48Q86UV5 1035 aa6.22□□□□□ -1.41
LGI1-230ENST00000638049 CACTIN-AS1Q8N1I8 211 aa6.22□□□□□ -1.41
LGI1-230ENST00000638049 PLVAPQ9BX97 442 aa6.22□□□□□ -1.41
LGI1-230ENST00000638049 ZC3H12CQ9C0D7 883 aaKnown RBP6.22□□□□□ -1.41
LGI1-230ENST00000638049 TM4SF5O14894 197 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms