RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 TAF5LO75529 589 aa11.2□□□□□ -0.62
CLN8-214ENST00000637594 ZBTB48P10074 688 aaPredicted RBP11.2□□□□□ -0.62
CLN8-214ENST00000637594 SOX10P56693 466 aa11.2□□□□□ -0.62
CLN8-214ENST00000637594 SUPT20HL1Q3ZLR7 823 aa11.2□□□□□ -0.62
CLN8-214ENST00000637594 FBXO46Q6PJ61 603 aaPredicted RBP11.2□□□□□ -0.62
CLN8-214ENST00000637594 ZNF804AQ7Z570 1209 aa11.2□□□□□ -0.62
CLN8-214ENST00000637594 PRMT6Q96LA8 375 aaPredicted RBP11.2□□□□□ -0.62
CLN8-214ENST00000637594 ANGEL1Q9UNK9 670 aaKnown RBP11.2□□□□□ -0.62
CLN8-214ENST00000637594 FAM205AQ6ZU69 1335 aa11.19□□□□□ -0.62
CLN8-214ENST00000637594 SPDYE2BA6NHP3 402 aa11.19□□□□□ -0.62
CLN8-214ENST00000637594 SNAP23O00161 211 aa11.19□□□□□ -0.62
CLN8-214ENST00000637594 MYO1BO43795 1136 aa11.19□□□□□ -0.62
CLN8-214ENST00000637594 PPP1R12BO60237 982 aaPredicted RBP11.19□□□□□ -0.62
CLN8-214ENST00000637594 SPDYE6P0CI01 402 aa11.19□□□□□ -0.62
CLN8-214ENST00000637594 EXOSC9Q06265 439 aaKnown RBP11.19□□□□□ -0.62
CLN8-214ENST00000637594 CCDC57Q2TAC2 916 aa11.19□□□□□ -0.62
CLN8-214ENST00000637594 CFAP100Q494V2 611 aa11.19□□□□□ -0.62
CLN8-214ENST00000637594 LMBR1LQ6UX01 489 aa11.19□□□□□ -0.62
CLN8-214ENST00000637594 LDHAL6AQ6ZMR3 332 aa11.19□□□□□ -0.62
CLN8-214ENST00000637594 IFNL1Q8IU54 200 aa11.19□□□□□ -0.62
CLN8-214ENST00000637594 HELBQ8NG08 1087 aaPredicted RBP11.19□□□□□ -0.62
CLN8-214ENST00000637594 R3HDMLQ9H3Y0 253 aa11.19□□□□□ -0.62
CLN8-214ENST00000637594 TESPA1A2RU30 521 aaPredicted RBP11.18□□□□□ -0.62
CLN8-214ENST00000637594 GRM8O00222 908 aa11.18□□□□□ -0.62
CLN8-214ENST00000637594 USP2O75604 605 aaPredicted RBP11.18□□□□□ -0.62
CLN8-214ENST00000637594 ALDH1L1O75891 902 aa11.18□□□□□ -0.62
CLN8-214ENST00000637594 UBE4AQ14139 1066 aa11.18□□□□□ -0.62
CLN8-214ENST00000637594 EPHA10Q5JZY3 1008 aa11.18□□□□□ -0.62
CLN8-214ENST00000637594 TDRD7Q8NHU6 1098 aaKnown RBP11.18□□□□□ -0.62
CLN8-214ENST00000637594 CACNA1FO60840 1977 aa11.17□□□□□ -0.62
CLN8-214ENST00000637594 F6X3S4 739 aa11.17□□□□□ -0.62
CLN8-214ENST00000637594 MKRN3Q13064 507 aaKnown RBP11.17□□□□□ -0.62
CLN8-214ENST00000637594 PRKG1Q13976 671 aa11.17□□□□□ -0.62
CLN8-214ENST00000637594 WNK4Q96J92 1243 aa11.17□□□□□ -0.62
CLN8-214ENST00000637594 SPINK5Q9NQ38 1064 aaPredicted RBP11.17□□□□□ -0.62
CLN8-214ENST00000637594 SERPINA10Q9UK55 444 aa11.17□□□□□ -0.62
CLN8-214ENST00000637594 PCDHAC2Q9Y5I4 1007 aa11.17□□□□□ -0.62
CLN8-214ENST00000637594 TNRC18O15417 2968 aaPredicted RBP11.17□□□□□ -0.62
CLN8-214ENST00000637594 UTYO14607 1347 aa11.16□□□□□ -0.62
CLN8-214ENST00000637594 IREB2P48200 963 aaKnown RBP11.16□□□□□ -0.62
CLN8-214ENST00000637594 NBPF12Q5TAG4 269 aaPredicted RBP11.16□□□□□ -0.62
CLN8-214ENST00000637594 PRPF38BQ5VTL8 546 aaKnown RBP11.16□□□□□ -0.62
CLN8-214ENST00000637594 INTS3Q68E01 1043 aaKnown RBP11.16□□□□□ -0.62
CLN8-214ENST00000637594 KAZALD1Q96I82 304 aa11.16□□□□□ -0.62
CLN8-214ENST00000637594 FAM84BQ96KN1 310 aaPredicted RBP11.16□□□□□ -0.62
CLN8-214ENST00000637594 MRIQ9BWK5 157 aa11.16□□□□□ -0.62
CLN8-214ENST00000637594 RIPOR2Q9Y4F9 1068 aa11.16□□□□□ -0.62
CLN8-214ENST00000637594 IGF2BP3O00425 579 aaKnown RBP eCLIP11.15□□□□□ -0.62
CLN8-214ENST00000637594 HIBADHP31937 336 aaKnown RBP11.15□□□□□ -0.62
CLN8-214ENST00000637594 TNFAIP1Q13829 316 aa11.15□□□□□ -0.62
CLN8-214ENST00000637594 RASA3Q14644 834 aa11.15□□□□□ -0.62
CLN8-214ENST00000637594 SPDYE2Q495Y8 402 aa11.15□□□□□ -0.62
CLN8-214ENST00000637594 OTUD7BQ6GQQ9 843 aa11.15□□□□□ -0.62
CLN8-214ENST00000637594 FBXO33Q7Z6M2 555 aa11.15□□□□□ -0.62
CLN8-214ENST00000637594 ANKRD13AQ8IZ07 590 aa11.15□□□□□ -0.62
CLN8-214ENST00000637594 ZNF594Q96JF6 807 aaPredicted RBP11.15□□□□□ -0.62
CLN8-214ENST00000637594 CLMNQ96JQ2 1002 aa11.15□□□□□ -0.62
CLN8-214ENST00000637594 MRS2Q9HD23 443 aa11.15□□□□□ -0.62
CLN8-214ENST00000637594 CNNM1Q9NRU3 951 aa11.15□□□□□ -0.62
CLN8-214ENST00000637594 C9orf78Q9NZ63 289 aaPredicted RBP11.15□□□□□ -0.62
CLN8-214ENST00000637594 FZD1Q9UP38 647 aa11.15□□□□□ -0.62
CLN8-214ENST00000637594 CHMP3Q9Y3E7 222 aa11.15□□□□□ -0.62
CLN8-214ENST00000637594 SSC5DA1L4H1 1573 aa11.15□□□□□ -0.62
CLN8-214ENST00000637594 SPEF2Q9C093 1822 aa11.14□□□□□ -0.63
CLN8-214ENST00000637594 CLRN2A0PK11 232 aa11.14□□□□□ -0.63
CLN8-214ENST00000637594 F8W031 263 aaPredicted RBP11.14□□□□□ -0.63
CLN8-214ENST00000637594 GJA5P36382 358 aa11.14□□□□□ -0.63
CLN8-214ENST00000637594 HDLBPQ00341 1268 aaKnown RBP11.14□□□□□ -0.63
CLN8-214ENST00000637594 TAF7LQ5H9L4 462 aa11.14□□□□□ -0.63
CLN8-214ENST00000637594 MFSD14BQ5SR56 506 aa11.14□□□□□ -0.63
CLN8-214ENST00000637594 OTOP1Q7RTM1 612 aa11.14□□□□□ -0.63
CLN8-214ENST00000637594 TEPSINQ96N21 525 aa11.14□□□□□ -0.63
CLN8-214ENST00000637594 PTPN18Q99952 460 aa11.14□□□□□ -0.63
CLN8-214ENST00000637594 SRCIN1Q9C0H9 1055 aa11.14□□□□□ -0.63
CLN8-214ENST00000637594 ZNF70Q9UC06 446 aaPredicted RBP11.14□□□□□ -0.63
CLN8-214ENST00000637594 AOX1Q06278 1338 aa11.13□□□□□ -0.63
CLN8-214ENST00000637594 MROH5Q6ZUA9 1318 aa11.13□□□□□ -0.63
CLN8-214ENST00000637594 PLIN1O60240 522 aa11.13□□□□□ -0.63
CLN8-214ENST00000637594 RABL6Q3YEC7 729 aaPredicted RBP11.13□□□□□ -0.63
CLN8-214ENST00000637594 DZIP1LQ8IYY4 767 aaKnown RBP11.13□□□□□ -0.63
CLN8-214ENST00000637594 ERO1AQ96HE7 468 aa11.13□□□□□ -0.63
CLN8-214ENST00000637594 MS4A4AQ96JQ5 239 aa11.13□□□□□ -0.63
CLN8-214ENST00000637594 VEZTQ9HBM0 779 aa11.13□□□□□ -0.63
CLN8-214ENST00000637594 TTF2Q9UNY4 1162 aaKnown RBP11.13□□□□□ -0.63
CLN8-214ENST00000637594 ANP32CO43423 234 aa11.12□□□□□ -0.63
CLN8-214ENST00000637594 NBPF7P0C2Y1 421 aaPredicted RBP11.12□□□□□ -0.63
CLN8-214ENST00000637594 GYG1P46976 350 aa11.12□□□□□ -0.63
CLN8-214ENST00000637594 RBM5P52756 815 aaKnown RBP eCLIP11.12□□□□□ -0.63
CLN8-214ENST00000637594 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.12□□□□□ -0.63
CLN8-214ENST00000637594 SUCLG2Q96I99 432 aa11.12□□□□□ -0.63
CLN8-214ENST00000637594 PUS3Q9BZE2 481 aaKnown RBP11.12□□□□□ -0.63
CLN8-214ENST00000637594 TDRD3Q9H7E2 651 aaKnown RBP11.12□□□□□ -0.63
CLN8-214ENST00000637594 PTPN22Q9Y2R2 807 aa11.12□□□□□ -0.63
CLN8-214ENST00000637594 SALL2Q9Y467 1007 aaPredicted RBP11.12□□□□□ -0.63
CLN8-214ENST00000637594 TRIM17Q9Y577 477 aa11.12□□□□□ -0.63
CLN8-214ENST00000637594 CRKP46108 304 aa11.11□□□□□ -0.63
CLN8-214ENST00000637594 MAP3K9P80192 1104 aa11.11□□□□□ -0.63
CLN8-214ENST00000637594 SP3Q02447 781 aa11.11□□□□□ -0.63
CLN8-214ENST00000637594 CRHR2Q13324 411 aa11.11□□□□□ -0.63
CLN8-214ENST00000637594 FKBP1CQ5VVH2 108 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms