RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 NLGN2Q8NFZ4 835 aa20.18■□□□□ 0.82
CLCN2-220ENST00000637538 HELLSQ9NRZ9 838 aa20.18■□□□□ 0.82
CLCN2-220ENST00000637538 DENND2AQ9ULE3 1009 aa20.18■□□□□ 0.82
CLCN2-220ENST00000637538 MYH13Q9UKX3 1938 aa20.18■□□□□ 0.82
CLCN2-220ENST00000637538 KCNA3P22001 575 aa20.17■□□□□ 0.82
CLCN2-220ENST00000637538 LRRFIP1Q32MZ4 808 aaKnown RBP20.17■□□□□ 0.82
CLCN2-220ENST00000637538 OLFM4Q6UX06 510 aa20.17■□□□□ 0.82
CLCN2-220ENST00000637538 ZNF589Q86UQ0 364 aaPredicted RBP20.17■□□□□ 0.82
CLCN2-220ENST00000637538 VPS37DQ86XT2 251 aa20.17■□□□□ 0.82
CLCN2-220ENST00000637538 SLFNL1Q499Z3 407 aa20.17■□□□□ 0.82
CLCN2-220ENST00000637538 MCMDC2Q4G0Z9 681 aa20.17■□□□□ 0.82
CLCN2-220ENST00000637538 TDRD7Q8NHU6 1098 aaKnown RBP20.17■□□□□ 0.82
CLCN2-220ENST00000637538 IL17RAQ96F46 866 aa20.17■□□□□ 0.82
CLCN2-220ENST00000637538 GPR101Q96P66 508 aaPredicted RBP20.17■□□□□ 0.82
CLCN2-220ENST00000637538 IQSEC3Q9UPP2 1182 aaPredicted RBP20.17■□□□□ 0.82
CLCN2-220ENST00000637538 DCAF8L1A6NGE4 600 aa20.16■□□□□ 0.82
CLCN2-220ENST00000637538 ADD2P35612 726 aa20.16■□□□□ 0.82
CLCN2-220ENST00000637538 MPNDQ8N594 471 aa20.16■□□□□ 0.82
CLCN2-220ENST00000637538 SEC62Q99442 399 aaKnown RBP20.16■□□□□ 0.82
CLCN2-220ENST00000637538 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.16■□□□□ 0.82
CLCN2-220ENST00000637538 CCDC171Q6TFL3 1326 aa20.15■□□□□ 0.82
CLCN2-220ENST00000637538 TCRBV5S4A2TA0A5A2 114 aa20.15■□□□□ 0.82
CLCN2-220ENST00000637538 PTH1RQ03431 593 aa20.15■□□□□ 0.82
CLCN2-220ENST00000637538 ZNF804AQ7Z570 1209 aa20.15■□□□□ 0.82
CLCN2-220ENST00000637538 OSBP2Q969R2 916 aa20.15■□□□□ 0.82
CLCN2-220ENST00000637538 MAST3O60307 1309 aa20.15■□□□□ 0.82
CLCN2-220ENST00000637538 IL1R1P14778 569 aa20.14■□□□□ 0.81
CLCN2-220ENST00000637538 DPEP1P16444 411 aa20.14■□□□□ 0.81
CLCN2-220ENST00000637538 PDE6AP16499 860 aa20.14■□□□□ 0.81
CLCN2-220ENST00000637538 TGFB2P61812 414 aa20.14■□□□□ 0.81
CLCN2-220ENST00000637538 UBE3CQ15386 1083 aa20.14■□□□□ 0.81
CLCN2-220ENST00000637538 ZSCAN25Q6NSZ9 544 aa20.14■□□□□ 0.81
CLCN2-220ENST00000637538 KIAA1211Q6ZU35 1233 aa20.14■□□□□ 0.81
CLCN2-220ENST00000637538 APPBP2Q92624 585 aa20.14■□□□□ 0.81
CLCN2-220ENST00000637538 WWC3Q9ULE0 1092 aa20.14■□□□□ 0.81
CLCN2-220ENST00000637538 YY1P25490 414 aa20.13■□□□□ 0.81
CLCN2-220ENST00000637538 HSPA4P34932 840 aa20.13■□□□□ 0.81
CLCN2-220ENST00000637538 SLC9C2Q5TAH2 1124 aa20.13■□□□□ 0.81
CLCN2-220ENST00000637538 DPP8Q6V1X1 898 aaPredicted RBP20.13■□□□□ 0.81
CLCN2-220ENST00000637538 MAP4K1Q92918 833 aa20.13■□□□□ 0.81
CLCN2-220ENST00000637538 RTFDC1Q9BY42 306 aaPredicted RBP20.13■□□□□ 0.81
CLCN2-220ENST00000637538 C6orf229H3BNL8 230 aa20.12■□□□□ 0.81
CLCN2-220ENST00000637538 M0R2C6 588 aa20.12■□□□□ 0.81
CLCN2-220ENST00000637538 IDH1O75874 414 aaKnown RBP20.12■□□□□ 0.81
CLCN2-220ENST00000637538 MAP3K12Q12852 859 aa20.12■□□□□ 0.81
CLCN2-220ENST00000637538 CC2D2BQ6DHV5 1058 aa20.12■□□□□ 0.81
CLCN2-220ENST00000637538 CCDC129Q6ZRS4 1044 aa20.12■□□□□ 0.81
CLCN2-220ENST00000637538 CD209Q9NNX6 404 aa20.12■□□□□ 0.81
CLCN2-220ENST00000637538 SALL1Q9NSC2 1324 aa20.12■□□□□ 0.81
CLCN2-220ENST00000637538 BRCA1P38398 1863 aaKnown RBP20.12■□□□□ 0.81
CLCN2-220ENST00000637538 A0A0G2JLW4 131 aa20.12■□□□□ 0.81
CLCN2-220ENST00000637538 WASHC4Q2M389 1173 aa20.12■□□□□ 0.81
CLCN2-220ENST00000637538 TTLL6Q8N841 843 aa20.12■□□□□ 0.81
CLCN2-220ENST00000637538 KCNB2Q92953 911 aa20.12■□□□□ 0.81
CLCN2-220ENST00000637538 PALD1Q9ULE6 856 aa20.12■□□□□ 0.81
CLCN2-220ENST00000637538 ANAPC15P60006 121 aa20.11■□□□□ 0.81
CLCN2-220ENST00000637538 PUS7LQ9H0K6 701 aaKnown RBP20.11■□□□□ 0.81
CLCN2-220ENST00000637538 TMX4Q9H1E5 349 aaPredicted RBP20.11■□□□□ 0.81
CLCN2-220ENST00000637538 MAST2Q6P0Q8 1798 aa20.11■□□□□ 0.81
CLCN2-220ENST00000637538 ZNF532Q9HCE3 1301 aa20.1■□□□□ 0.81
CLCN2-220ENST00000637538 NECTIN1Q15223 517 aa20.1■□□□□ 0.81
CLCN2-220ENST00000637538 IGSF3O75054 1194 aa20.09■□□□□ 0.81
CLCN2-220ENST00000637538 FRAT2O75474 233 aaPredicted RBP20.09■□□□□ 0.81
CLCN2-220ENST00000637538 MCCP23508 829 aa20.09■□□□□ 0.81
CLCN2-220ENST00000637538 ZNF384Q8TF68 577 aa20.09■□□□□ 0.81
CLCN2-220ENST00000637538 DDRGK1Q96HY6 314 aa20.09■□□□□ 0.81
CLCN2-220ENST00000637538 IPO9Q96P70 1041 aaKnown RBP20.09■□□□□ 0.81
CLCN2-220ENST00000637538 COA1Q9GZY4 146 aa20.09■□□□□ 0.81
CLCN2-220ENST00000637538 LRP2BPQ9P2M1 347 aa20.09■□□□□ 0.81
CLCN2-220ENST00000637538 RBM8AQ9Y5S9 174 aaKnown RBP20.09■□□□□ 0.81
CLCN2-220ENST00000637538 FOXP2O15409 715 aa20.08■□□□□ 0.81
CLCN2-220ENST00000637538 GPR162Q16538 588 aa20.08■□□□□ 0.81
CLCN2-220ENST00000637538 GRIPAP1Q4V328 841 aa20.08■□□□□ 0.81
CLCN2-220ENST00000637538 MAGEB6Q8N7X4 407 aa20.08■□□□□ 0.81
CLCN2-220ENST00000637538 EYA3Q99504 573 aa20.08■□□□□ 0.81
CLCN2-220ENST00000637538 DSCC1Q9BVC3 393 aa20.08■□□□□ 0.81
CLCN2-220ENST00000637538 CHD4Q14839 1912 aa20.08■□□□□ 0.8
CLCN2-220ENST00000637538 CHAF1AQ13111 956 aaPredicted RBP20.07■□□□□ 0.8
CLCN2-220ENST00000637538 TMED8Q6PL24 325 aaPredicted RBP20.07■□□□□ 0.8
CLCN2-220ENST00000637538 WDR66Q8TBY9 1149 aa20.07■□□□□ 0.8
CLCN2-220ENST00000637538 ABCF2Q9UG63 623 aa20.07■□□□□ 0.8
CLCN2-220ENST00000637538 FAM205AQ6ZU69 1335 aa20.07■□□□□ 0.8
CLCN2-220ENST00000637538 RABEP1Q15276 862 aa20.07■□□□□ 0.8
CLCN2-220ENST00000637538 VPS53Q5VIR6 699 aa20.07■□□□□ 0.8
CLCN2-220ENST00000637538 ZC3H12CQ9C0D7 883 aaKnown RBP20.07■□□□□ 0.8
CLCN2-220ENST00000637538 GPAA1O43292 621 aa20.06■□□□□ 0.8
CLCN2-220ENST00000637538 C21orf2O43822 256 aa20.06■□□□□ 0.8
CLCN2-220ENST00000637538 HSPD1P10809 573 aaKnown RBP20.06■□□□□ 0.8
CLCN2-220ENST00000637538 RASEFQ8IZ41 740 aa20.06■□□□□ 0.8
CLCN2-220ENST00000637538 NSUN4Q96CB9 384 aaKnown RBP20.06■□□□□ 0.8
CLCN2-220ENST00000637538 ZNF219Q9P2Y4 722 aaPredicted RBP20.06■□□□□ 0.8
CLCN2-220ENST00000637538 SNX14Q9Y5W7 946 aa20.06■□□□□ 0.8
CLCN2-220ENST00000637538 U3KPZ7 1027 aaPredicted RBP20.06■□□□□ 0.8
CLCN2-220ENST00000637538 RIMBP2O15034 1052 aa20.05■□□□□ 0.8
CLCN2-220ENST00000637538 YBX3P16989 372 aaKnown RBP eCLIP20.05■□□□□ 0.8
CLCN2-220ENST00000637538 PRDX5P30044 214 aa20.05■□□□□ 0.8
CLCN2-220ENST00000637538 ERICH6Q7L0X2 663 aa20.05■□□□□ 0.8
CLCN2-220ENST00000637538 ADGRA1Q86SQ6 560 aa20.05■□□□□ 0.8
CLCN2-220ENST00000637538 ZGPATQ8N5A5 531 aaKnown RBP20.05■□□□□ 0.8
CLCN2-220ENST00000637538 RAI14Q9P0K7 980 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms