RNA–Protein interactions for RNA: ENST00000637350.1

CHRNA7-227, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,241 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-227ENST00000637350 IGHMBP2P38935 993 aaKnown RBP20.15■□□□□ 0.82
CHRNA7-227ENST00000637350 SF3B3Q15393 1217 aaKnown RBP20.15■□□□□ 0.82
CHRNA7-227ENST00000637350 ZMYM1Q5SVZ6 1142 aa20.15■□□□□ 0.82
CHRNA7-227ENST00000637350 NBPF5PQ86XG9 351 aaPredicted RBP20.15■□□□□ 0.82
CHRNA7-227ENST00000637350 LRRC2Q9BYS8 371 aa20.15■□□□□ 0.82
CHRNA7-227ENST00000637350 UBR3Q6ZT12 1888 aa20.15■□□□□ 0.82
CHRNA7-227ENST00000637350 ABCC12Q96J65 1359 aa20.14■□□□□ 0.82
CHRNA7-227ENST00000637350 FERMT3Q86UX7 667 aa20.14■□□□□ 0.81
CHRNA7-227ENST00000637350 TICAM2Q86XR7 235 aa20.14■□□□□ 0.81
CHRNA7-227ENST00000637350 PDLIM2Q96JY6 352 aa20.14■□□□□ 0.81
CHRNA7-227ENST00000637350 HMGB2P26583 209 aaKnown RBP20.14■□□□□ 0.81
CHRNA7-227ENST00000637350 RXRBP28702 533 aa20.14■□□□□ 0.81
CHRNA7-227ENST00000637350 UBE2HP62256 183 aa20.14■□□□□ 0.81
CHRNA7-227ENST00000637350 KRT32Q14532 448 aa20.14■□□□□ 0.81
CHRNA7-227ENST00000637350 LARP1BQ659C4 914 aaKnown RBP20.14■□□□□ 0.81
CHRNA7-227ENST00000637350 FAM173BQ6P4H8 233 aa20.14■□□□□ 0.81
CHRNA7-227ENST00000637350 TPTE2Q6XPS3 522 aa20.14■□□□□ 0.81
CHRNA7-227ENST00000637350 Q6ZUG5 572 aa20.14■□□□□ 0.81
CHRNA7-227ENST00000637350 SYAP1Q96A49 352 aaPredicted RBP20.14■□□□□ 0.81
CHRNA7-227ENST00000637350 CDC5LQ99459 802 aaKnown RBP20.14■□□□□ 0.81
CHRNA7-227ENST00000637350 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.13■□□□□ 0.81
CHRNA7-227ENST00000637350 M0R2C6 588 aa20.13■□□□□ 0.81
CHRNA7-227ENST00000637350 JAK2O60674 1132 aa20.13■□□□□ 0.81
CHRNA7-227ENST00000637350 PUM3Q15397 648 aaKnown RBP20.13■□□□□ 0.81
CHRNA7-227ENST00000637350 ANP32BQ92688 251 aaKnown RBP20.13■□□□□ 0.81
CHRNA7-227ENST00000637350 TSPY26PQ9H489 355 aa20.13■□□□□ 0.81
CHRNA7-227ENST00000637350 ATP6V1DQ9Y5K8 247 aa20.13■□□□□ 0.81
CHRNA7-227ENST00000637350 SCARF1Q14162 830 aa20.12■□□□□ 0.81
CHRNA7-227ENST00000637350 GTF3C6Q969F1 213 aa20.12■□□□□ 0.81
CHRNA7-227ENST00000637350 HELLSQ9NRZ9 838 aa20.12■□□□□ 0.81
CHRNA7-227ENST00000637350 CASZ1Q86V15 1759 aa20.12■□□□□ 0.81
CHRNA7-227ENST00000637350 LPIN2Q92539 896 aa20.12■□□□□ 0.81
CHRNA7-227ENST00000637350 RGS17Q9UGC6 210 aaPredicted RBP20.12■□□□□ 0.81
CHRNA7-227ENST00000637350 TXNRD1Q16881 649 aa20.11■□□□□ 0.81
CHRNA7-227ENST00000637350 C3orf67Q6ZVT6 689 aa20.11■□□□□ 0.81
CHRNA7-227ENST00000637350 FGFR2P21802 821 aa20.11■□□□□ 0.81
CHRNA7-227ENST00000637350 CCDC183Q5T5S1 534 aa20.11■□□□□ 0.81
CHRNA7-227ENST00000637350 HELBQ8NG08 1087 aaPredicted RBP20.11■□□□□ 0.81
CHRNA7-227ENST00000637350 RNF113AO15541 343 aaKnown RBP20.1■□□□□ 0.81
CHRNA7-227ENST00000637350 HSPD1P10809 573 aaKnown RBP20.1■□□□□ 0.81
CHRNA7-227ENST00000637350 FKBP4Q02790 459 aaKnown RBP eCLIP20.1■□□□□ 0.81
CHRNA7-227ENST00000637350 PI16Q6UXB8 463 aa20.1■□□□□ 0.81
CHRNA7-227ENST00000637350 ZNF512BQ96KM6 892 aaPredicted RBP20.1■□□□□ 0.81
CHRNA7-227ENST00000637350 NLRP3Q96P20 1036 aa20.1■□□□□ 0.81
CHRNA7-227ENST00000637350 DSCC1Q9BVC3 393 aa20.1■□□□□ 0.81
CHRNA7-227ENST00000637350 ARAP2Q8WZ64 1704 aa20.1■□□□□ 0.81
CHRNA7-227ENST00000637350 PROM2Q8N271 834 aa20.1■□□□□ 0.81
CHRNA7-227ENST00000637350 BRF1Q92994 677 aa20.1■□□□□ 0.81
CHRNA7-227ENST00000637350 CARMIL3Q8ND23 1372 aa20.1■□□□□ 0.81
CHRNA7-227ENST00000637350 FOXP2O15409 715 aa20.09■□□□□ 0.81
CHRNA7-227ENST00000637350 TTC6Q86TZ1 520 aa20.09■□□□□ 0.81
CHRNA7-227ENST00000637350 ANKRD18AQ8IVF6 992 aa20.09■□□□□ 0.81
CHRNA7-227ENST00000637350 OSBP2Q969R2 916 aa20.09■□□□□ 0.81
CHRNA7-227ENST00000637350 ANO8Q9HCE9 1232 aaPredicted RBP20.09■□□□□ 0.81
CHRNA7-227ENST00000637350 PLSCR1O15162 318 aa20.08■□□□□ 0.81
CHRNA7-227ENST00000637350 NFIXQ14938 502 aa20.08■□□□□ 0.81
CHRNA7-227ENST00000637350 SLC5A1P13866 664 aa20.08■□□□□ 0.8
CHRNA7-227ENST00000637350 SCRN1Q12765 414 aa20.08■□□□□ 0.8
CHRNA7-227ENST00000637350 TTLL5Q6EMB2 1281 aa20.08■□□□□ 0.8
CHRNA7-227ENST00000637350 NPHP1O15259 732 aa20.07■□□□□ 0.8
CHRNA7-227ENST00000637350 TAF1P21675 1872 aa20.07■□□□□ 0.8
CHRNA7-227ENST00000637350 CHRNDQ07001 517 aa20.07■□□□□ 0.8
CHRNA7-227ENST00000637350 LRRFIP1Q32MZ4 808 aaKnown RBP20.07■□□□□ 0.8
CHRNA7-227ENST00000637350 CCDC102BQ68D86 513 aa20.07■□□□□ 0.8
CHRNA7-227ENST00000637350 BSDC1Q9NW68 430 aaPredicted RBP20.07■□□□□ 0.8
CHRNA7-227ENST00000637350 COL4A1P02462 1669 aa20.06■□□□□ 0.8
CHRNA7-227ENST00000637350 E7EWF7 191 aa20.06■□□□□ 0.8
CHRNA7-227ENST00000637350 APBA3O96018 575 aa20.06■□□□□ 0.8
CHRNA7-227ENST00000637350 PDCP20941 246 aa20.06■□□□□ 0.8
CHRNA7-227ENST00000637350 MCAMP43121 646 aa20.06■□□□□ 0.8
CHRNA7-227ENST00000637350 ZAP70P43403 619 aa20.06■□□□□ 0.8
CHRNA7-227ENST00000637350 GYS1P13807 737 aa20.06■□□□□ 0.8
CHRNA7-227ENST00000637350 ARID4AP29374 1257 aaPredicted RBP20.06■□□□□ 0.8
CHRNA7-227ENST00000637350 UQCRFS1P1P0C7P4 283 aa20.05■□□□□ 0.8
CHRNA7-227ENST00000637350 PHKA1P46020 1223 aa20.05■□□□□ 0.8
CHRNA7-227ENST00000637350 EXOSC10Q01780 885 aaKnown RBP20.05■□□□□ 0.8
CHRNA7-227ENST00000637350 APOBRQ0VD83 1088 aa20.05■□□□□ 0.8
CHRNA7-227ENST00000637350 DHX32Q7L7V1 743 aaKnown RBP20.05■□□□□ 0.8
CHRNA7-227ENST00000637350 ZSCAN30Q86W11 494 aa20.05■□□□□ 0.8
CHRNA7-227ENST00000637350 CCDC24Q8N4L8 307 aa20.05■□□□□ 0.8
CHRNA7-227ENST00000637350 DDX11Q96FC9 970 aa20.05■□□□□ 0.8
CHRNA7-227ENST00000637350 KRT85P78386 507 aa20.04■□□□□ 0.8
CHRNA7-227ENST00000637350 CHST3Q7LGC8 479 aa20.04■□□□□ 0.8
CHRNA7-227ENST00000637350 CNBD1Q8NA66 436 aa20.04■□□□□ 0.8
CHRNA7-227ENST00000637350 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.04■□□□□ 0.8
CHRNA7-227ENST00000637350 SNAP23O00161 211 aa20.04■□□□□ 0.8
CHRNA7-227ENST00000637350 CTDNEP1O95476 244 aa20.04■□□□□ 0.8
CHRNA7-227ENST00000637350 ZFYP08048 801 aaPredicted RBP20.04■□□□□ 0.8
CHRNA7-227ENST00000637350 GIMAP6Q6P9H5 292 aa20.04■□□□□ 0.8
CHRNA7-227ENST00000637350 CELF1Q92879 486 aaKnown RBP20.04■□□□□ 0.8
CHRNA7-227ENST00000637350 FUCA2Q9BTY2 467 aa20.04■□□□□ 0.8
CHRNA7-227ENST00000637350 CSPP1Q1MSJ5 1256 aa20.03■□□□□ 0.8
CHRNA7-227ENST00000637350 DOCK2Q92608 1830 aa20.03■□□□□ 0.8
CHRNA7-227ENST00000637350 PFKFB2O60825 505 aa20.03■□□□□ 0.8
CHRNA7-227ENST00000637350 RPS8P62241 208 aaKnown RBP20.03■□□□□ 0.8
CHRNA7-227ENST00000637350 TTF1Q15361 905 aaPredicted RBP20.03■□□□□ 0.8
CHRNA7-227ENST00000637350 POTEAQ6S8J7 498 aa20.03■□□□□ 0.8
CHRNA7-227ENST00000637350 SMARCC2Q8TAQ2 1214 aa20.03■□□□□ 0.8
CHRNA7-227ENST00000637350 AGXT2Q9BYV1 514 aa20.03■□□□□ 0.8
CHRNA7-227ENST00000637350 FGD1P98174 961 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms