RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 GCP02774 474 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 LDHCP07864 332 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 LIG1P18858 919 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 TKFCQ3LXA3 575 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 C16orf87Q6PH81 154 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 USP17L2Q6R6M4 530 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 USP17L1Q7RTZ2 530 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 VPS37AQ8NEZ2 397 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 KIF12Q96FN5 646 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 DUSP9Q99956 384 aaKnown RBP9.19□□□□□ -0.94
CLN5-217ENST00000637278 CLEC11AQ9Y240 323 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 INPP5FQ9Y2H2 1132 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 OVOS2A0A0G2JMS6 1433 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 OVOS2A0A0J9YW53 1432 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 OVOS2Q6IE36 1432 aa9.19□□□□□ -0.94
CLN5-217ENST00000637278 DNAJC6O75061 913 aa9.18□□□□□ -0.94
CLN5-217ENST00000637278 EIF3JO75822 258 aaKnown RBP9.18□□□□□ -0.94
CLN5-217ENST00000637278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.18□□□□□ -0.94
CLN5-217ENST00000637278 NUCKS1Q9H1E3 243 aaKnown RBP9.18□□□□□ -0.94
CLN5-217ENST00000637278 RMI1Q9H9A7 625 aa9.18□□□□□ -0.94
CLN5-217ENST00000637278 FANCLQ9NW38 375 aa9.18□□□□□ -0.94
CLN5-217ENST00000637278 NFAT5O94916 1531 aa9.18□□□□□ -0.94
CLN5-217ENST00000637278 SPDYE16A6NNV3 312 aaPredicted RBP9.18□□□□□ -0.94
CLN5-217ENST00000637278 SIM2Q14190 667 aaPredicted RBP9.18□□□□□ -0.94
CLN5-217ENST00000637278 PPP4R4Q6NUP7 873 aa9.18□□□□□ -0.94
CLN5-217ENST00000637278 STRN4Q9NRL3 753 aa9.18□□□□□ -0.94
CLN5-217ENST00000637278 USP31Q70CQ4 1352 aa9.18□□□□□ -0.94
CLN5-217ENST00000637278 KLHL33A6NCF5 533 aa9.18□□□□□ -0.94
CLN5-217ENST00000637278 ATP9BO43861 1147 aa9.18□□□□□ -0.94
CLN5-217ENST00000637278 CAND2O75155 1236 aa9.18□□□□□ -0.94
CLN5-217ENST00000637278 TRAPPC10P48553 1259 aa9.18□□□□□ -0.94
CLN5-217ENST00000637278 SLC4A8Q2Y0W8 1093 aa9.18□□□□□ -0.94
CLN5-217ENST00000637278 NYAP1Q6ZVC0 841 aa9.18□□□□□ -0.94
CLN5-217ENST00000637278 UBR7Q8N806 425 aa9.18□□□□□ -0.94
CLN5-217ENST00000637278 CCDC7Q96M83 1385 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 CTAGE5O15320 804 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 DUSP27Q5VZP5 1158 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 CXorf56Q9H5V9 222 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 TONSLQ96HA7 1378 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 USP17L15C9J2P7 530 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 USP17L10C9JJH3 530 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 USP17L13C9JLJ4 530 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 USP17L12C9JPN9 530 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 USP17L11C9JVI0 530 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 USP17L21D6R901 530 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 USP17L18D6R9N7 530 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 USP17L22D6RA61 530 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 USP17L17D6RBQ6 530 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 USP17L19D6RCP7 530 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 USP17L20D6RJB6 530 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 CD53P19397 219 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 HSD3B2P26439 372 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 MECOMQ03112 1051 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 USP17L24Q0WX57 530 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 CHRNA2Q15822 529 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 DEFB132Q7Z7B7 95 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 CCAR1Q8IX12 1150 aaKnown RBP9.17□□□□□ -0.94
CLN5-217ENST00000637278 C22orf23Q9BZE7 217 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 CABP1Q9NZU7 370 aa9.17□□□□□ -0.94
CLN5-217ENST00000637278 DNMT3AQ9Y6K1 912 aaPredicted RBP9.17□□□□□ -0.94
CLN5-217ENST00000637278 HDAC9Q9UKV0 1011 aa9.16□□□□□ -0.94
CLN5-217ENST00000637278 ZNF232Q9UNY5 417 aa9.16□□□□□ -0.94
CLN5-217ENST00000637278 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.16□□□□□ -0.94
CLN5-217ENST00000637278 KTN1Q86UP2 1357 aaKnown RBP9.16□□□□□ -0.94
CLN5-217ENST00000637278 EDC4Q6P2E9 1401 aaKnown RBP9.16□□□□□ -0.94
CLN5-217ENST00000637278 TTC21BQ7Z4L5 1316 aa9.16□□□□□ -0.94
CLN5-217ENST00000637278 WDR17Q8IZU2 1322 aa9.16□□□□□ -0.94
CLN5-217ENST00000637278 FAM200BP0CF97 657 aa9.16□□□□□ -0.94
CLN5-217ENST00000637278 ASB16Q96NS5 453 aa9.16□□□□□ -0.94
CLN5-217ENST00000637278 GPHNQ9NQX3 736 aaPredicted RBP9.16□□□□□ -0.94
CLN5-217ENST00000637278 FOSP01100 380 aaPredicted RBP9.15□□□□□ -0.94
CLN5-217ENST00000637278 SYNPO2Q9UMS6 1093 aa9.15□□□□□ -0.94
CLN5-217ENST00000637278 SBF2Q86WG5 1849 aa9.15□□□□□ -0.94
CLN5-217ENST00000637278 NAA30Q147X3 362 aaPredicted RBP9.15□□□□□ -0.94
CLN5-217ENST00000637278 TNPO1Q92973 898 aaKnown RBP9.15□□□□□ -0.94
CLN5-217ENST00000637278 CCDC85AQ96PX6 553 aaPredicted RBP9.15□□□□□ -0.94
CLN5-217ENST00000637278 TSPYL1Q9H0U9 437 aa9.15□□□□□ -0.94
CLN5-217ENST00000637278 PPP1R12AO14974 1030 aaPredicted RBP9.14□□□□□ -0.95
CLN5-217ENST00000637278 CD151P48509 253 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 RBL2Q08999 1139 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 NFKBIBQ15653 356 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 NBPF14Q5TI25 921 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 LARP1Q6PKG0 1096 aaKnown RBP9.14□□□□□ -0.95
CLN5-217ENST00000637278 SLC4A10Q6U841 1118 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 TMC7Q7Z402 723 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 HDGFL2Q7Z4V5 671 aaPredicted RBP9.14□□□□□ -0.95
CLN5-217ENST00000637278 PHC3Q8NDX5 983 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 SRPK1Q96SB4 655 aaKnown RBP9.14□□□□□ -0.95
CLN5-217ENST00000637278 MUC3BQ9H195 1237 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 NEUROD4Q9HD90 331 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 BPNT1O95861 308 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 RASA1P20936 1047 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 NCOA4Q13772 614 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 CCDC70Q6NSX1 233 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 SUFUQ9UMX1 484 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 GJA3Q9Y6H8 435 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 LTN1O94822 1766 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 KIF1CO43896 1103 aaKnown RBP9.14□□□□□ -0.95
CLN5-217ENST00000637278 FLT3P36888 993 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 CBX1P83916 185 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms