RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 ZNF865P0CJ78 1059 aaPredicted RBP4.06□□□□□ -1.76
VIM-210ENST00000637053 CDC25BP30305 580 aa4.06□□□□□ -1.76
VIM-210ENST00000637053 DUOXA2Q1HG44 320 aa4.06□□□□□ -1.76
VIM-210ENST00000637053 WWC1Q8IX03 1113 aa4.06□□□□□ -1.76
VIM-210ENST00000637053 TP53INP2Q8IXH6 220 aa4.06□□□□□ -1.76
VIM-210ENST00000637053 FBXL18Q96ME1 805 aa4.06□□□□□ -1.76
VIM-210ENST00000637053 LACRTQ9GZZ8 138 aa4.06□□□□□ -1.76
VIM-210ENST00000637053 SLC52A1Q9NWF4 448 aa4.06□□□□□ -1.76
VIM-210ENST00000637053 LEMD3Q9Y2U8 911 aa4.06□□□□□ -1.76
VIM-210ENST00000637053 FSCN2O14926 492 aa4.05□□□□□ -1.76
VIM-210ENST00000637053 PTMAP06454 111 aaKnown RBP4.05□□□□□ -1.76
VIM-210ENST00000637053 SOX18P35713 384 aa4.05□□□□□ -1.76
VIM-210ENST00000637053 ATP11AP98196 1134 aa4.05□□□□□ -1.76
VIM-210ENST00000637053 OS9Q13438 667 aaPredicted RBP4.05□□□□□ -1.76
VIM-210ENST00000637053 COL13A1Q5TAT6 717 aaPredicted RBP4.05□□□□□ -1.76
VIM-210ENST00000637053 VSIG10LQ86VR7 867 aa4.05□□□□□ -1.76
VIM-210ENST00000637053 FBXL6Q8N531 539 aa4.05□□□□□ -1.76
VIM-210ENST00000637053 ADAMTS19Q8TE59 1207 aa4.05□□□□□ -1.76
VIM-210ENST00000637053 SECISBP2LQ93073 1101 aaKnown RBP4.05□□□□□ -1.76
VIM-210ENST00000637053 KLHDC7BQ96G42 594 aa4.05□□□□□ -1.76
VIM-210ENST00000637053 C8orf37Q96NL8 207 aa4.05□□□□□ -1.76
VIM-210ENST00000637053 UCN2Q96RP3 112 aa4.05□□□□□ -1.76
VIM-210ENST00000637053 KRTAP9-3Q9BYQ3 159 aa4.05□□□□□ -1.76
VIM-210ENST00000637053 QTRT2Q9H974 415 aaKnown RBP4.05□□□□□ -1.76
VIM-210ENST00000637053 PAK6Q9NQU5 681 aaPredicted RBP4.05□□□□□ -1.76
VIM-210ENST00000637053 TERF2IPQ9NYB0 399 aa4.05□□□□□ -1.76
VIM-210ENST00000637053 MKRN1Q9UHC7 482 aaKnown RBP4.05□□□□□ -1.76
VIM-210ENST00000637053 NAP1L2Q9ULW6 460 aaPredicted RBP4.05□□□□□ -1.76
VIM-210ENST00000637053 KCNMB2Q9Y691 235 aa4.05□□□□□ -1.76
VIM-210ENST00000637053 IVNS1ABPQ9Y6Y0 642 aa4.05□□□□□ -1.76
VIM-210ENST00000637053 ACIN1Q9UKV3 1341 aaKnown RBP4.04□□□□□ -1.76
VIM-210ENST00000637053 TCF3P15923 654 aa4.04□□□□□ -1.76
VIM-210ENST00000637053 RALBP1Q15311 655 aa4.04□□□□□ -1.76
VIM-210ENST00000637053 SGO2Q562F6 1265 aa4.04□□□□□ -1.76
VIM-210ENST00000637053 APBB1IPQ7Z5R6 666 aaPredicted RBP4.04□□□□□ -1.76
VIM-210ENST00000637053 RGL4Q8IZJ4 473 aa4.04□□□□□ -1.76
VIM-210ENST00000637053 FAM9BQ8IZU0 186 aa4.04□□□□□ -1.76
VIM-210ENST00000637053 CACTIN-AS1Q8N1I8 211 aa4.04□□□□□ -1.76
VIM-210ENST00000637053 MRRFQ96E11 262 aaKnown RBP4.04□□□□□ -1.76
VIM-210ENST00000637053 POM121Q96HA1 1249 aa4.04□□□□□ -1.76
VIM-210ENST00000637053 ATG3Q9NT62 314 aa4.04□□□□□ -1.76
VIM-210ENST00000637053 SART1O43290 800 aaKnown RBP4.03□□□□□ -1.76
VIM-210ENST00000637053 RAB11FIP3O75154 756 aa4.03□□□□□ -1.76
VIM-210ENST00000637053 EPHA1P21709 976 aa4.03□□□□□ -1.76
VIM-210ENST00000637053 MAP4P27816 1152 aaKnown RBP4.03□□□□□ -1.76
VIM-210ENST00000637053 CDC27P30260 824 aa4.03□□□□□ -1.76
VIM-210ENST00000637053 GIMAP6Q6P9H5 292 aa4.03□□□□□ -1.76
VIM-210ENST00000637053 ZNF662Q6ZS27 426 aa4.03□□□□□ -1.76
VIM-210ENST00000637053 CMTR1Q8N1G2 835 aaKnown RBP4.03□□□□□ -1.76
VIM-210ENST00000637053 NME8Q8N427 588 aa4.03□□□□□ -1.76
VIM-210ENST00000637053 MORC4Q8TE76 937 aa4.03□□□□□ -1.76
VIM-210ENST00000637053 UBXN4Q92575 508 aa4.03□□□□□ -1.76
VIM-210ENST00000637053 RBSNQ9H1K0 784 aa4.03□□□□□ -1.76
VIM-210ENST00000637053 SH2B1Q9NRF2 756 aaPredicted RBP4.03□□□□□ -1.76
VIM-210ENST00000637053 ADMP35318 185 aa4.02□□□□□ -1.77
VIM-210ENST00000637053 TRIP4Q15650 581 aaPredicted RBP4.02□□□□□ -1.77
VIM-210ENST00000637053 CEP135Q66GS9 1140 aa4.02□□□□□ -1.77
VIM-210ENST00000637053 ANKRD34AQ69YU3 496 aa4.02□□□□□ -1.77
VIM-210ENST00000637053 CILP2Q8IUL8 1156 aa4.02□□□□□ -1.77
VIM-210ENST00000637053 KLHL23Q8NBE8 558 aa4.02□□□□□ -1.77
VIM-210ENST00000637053 IPO4Q8TEX9 1081 aaKnown RBP4.02□□□□□ -1.77
VIM-210ENST00000637053 OSBPL1AQ9BXW6 950 aa4.02□□□□□ -1.77
VIM-210ENST00000637053 UBA5Q9GZZ9 404 aa4.02□□□□□ -1.77
VIM-210ENST00000637053 BSDC1Q9NW68 430 aaPredicted RBP4.02□□□□□ -1.77
VIM-210ENST00000637053 KCNG1Q9UIX4 513 aa4.02□□□□□ -1.77
VIM-210ENST00000637053 LRFN2Q9ULH4 789 aa4.02□□□□□ -1.77
VIM-210ENST00000637053 HIF3AQ9Y2N7 669 aa4.02□□□□□ -1.77
VIM-210ENST00000637053 COG6Q9Y2V7 657 aa4.02□□□□□ -1.77
VIM-210ENST00000637053 HMGB1P1B2RPK0 211 aaPredicted RBP4.01□□□□□ -1.77
VIM-210ENST00000637053 ERCC3P19447 782 aa4.01□□□□□ -1.77
VIM-210ENST00000637053 IGFBP4P22692 258 aa4.01□□□□□ -1.77
VIM-210ENST00000637053 SEC13P55735 322 aa4.01□□□□□ -1.77
VIM-210ENST00000637053 C11orf91Q3C1V1 193 aa4.01□□□□□ -1.77
VIM-210ENST00000637053 ERICH6BQ5W0A0 696 aa4.01□□□□□ -1.77
VIM-210ENST00000637053 TXNDC2Q86VQ3 553 aa4.01□□□□□ -1.77
VIM-210ENST00000637053 WFDC3Q8IUB2 231 aa4.01□□□□□ -1.77
VIM-210ENST00000637053 FLCNQ8NFG4 579 aa4.01□□□□□ -1.77
VIM-210ENST00000637053 MYO19Q96H55 970 aa4.01□□□□□ -1.77
VIM-210ENST00000637053 HINFPQ9BQA5 517 aa4.01□□□□□ -1.77
VIM-210ENST00000637053 RASSF4Q9H2L5 321 aa4.01□□□□□ -1.77
VIM-210ENST00000637053 PPP1R1BQ9UD71 204 aaPredicted RBP4.01□□□□□ -1.77
VIM-210ENST00000637053 USTQ9Y2C2 406 aa4.01□□□□□ -1.77
VIM-210ENST00000637053 POM121CA8CG34 1229 aa4□□□□□ -1.77
VIM-210ENST00000637053 ATP9BO43861 1147 aa4□□□□□ -1.77
VIM-210ENST00000637053 GLIPR1L2Q4G1C9 344 aa4□□□□□ -1.77
VIM-210ENST00000637053 CCDC181Q5TID7 509 aa4□□□□□ -1.77
VIM-210ENST00000637053 TREML1Q86YW5 311 aa4□□□□□ -1.77
VIM-210ENST00000637053 ANP32EQ9BTT0 268 aa4□□□□□ -1.77
VIM-210ENST00000637053 RNF208Q9H0X6 261 aa4□□□□□ -1.77
VIM-210ENST00000637053 SEC31BQ9NQW1 1179 aa4□□□□□ -1.77
VIM-210ENST00000637053 CYP26A1O43174 497 aa3.99□□□□□ -1.77
VIM-210ENST00000637053 PPFIA4O75335 1185 aa3.99□□□□□ -1.77
VIM-210ENST00000637053 PEX14O75381 377 aa3.99□□□□□ -1.77
VIM-210ENST00000637053 FARP2O94887 1054 aaPredicted RBP3.99□□□□□ -1.77
VIM-210ENST00000637053 MAP4K4O95819 1239 aaPredicted RBP3.99□□□□□ -1.77
VIM-210ENST00000637053 NLRP12P59046 1061 aa3.99□□□□□ -1.77
VIM-210ENST00000637053 ZC3H6P61129 1189 aaKnown RBP3.99□□□□□ -1.77
VIM-210ENST00000637053 CPSF6Q16630 551 aaKnown RBP eCLIP3.99□□□□□ -1.77
VIM-210ENST00000637053 LONRF3Q496Y0 759 aa3.99□□□□□ -1.77
VIM-210ENST00000637053 HGSNATQ68CP4 663 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms