RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 HOXA10P31260 410 aaPredicted RBP8.37□□□□□ -1.07
UPF3B-205ENST00000636792 ERFEQ4G0M1 354 aa8.37□□□□□ -1.07
UPF3B-205ENST00000636792 GRIPAP1Q4V328 841 aa8.37□□□□□ -1.07
UPF3B-205ENST00000636792 C20orf194Q5TEA3 1177 aa8.37□□□□□ -1.07
UPF3B-205ENST00000636792 SPRYD7Q5W111 196 aa8.37□□□□□ -1.07
UPF3B-205ENST00000636792 MSL1Q68DK7 614 aa8.37□□□□□ -1.07
UPF3B-205ENST00000636792 STYK1Q6J9G0 422 aa8.37□□□□□ -1.07
UPF3B-205ENST00000636792 PADI6Q6TGC4 694 aa8.37□□□□□ -1.07
UPF3B-205ENST00000636792 ZNF598Q86UK7 904 aaKnown RBP8.37□□□□□ -1.07
UPF3B-205ENST00000636792 CDC5LQ99459 802 aaKnown RBP8.37□□□□□ -1.07
UPF3B-205ENST00000636792 PDGFDQ9GZP0 370 aaPredicted RBP8.37□□□□□ -1.07
UPF3B-205ENST00000636792 WDR70Q9NW82 654 aa8.37□□□□□ -1.07
UPF3B-205ENST00000636792 TNNQ9UQP3 1299 aa8.37□□□□□ -1.07
UPF3B-205ENST00000636792 ARAP2Q8WZ64 1704 aa8.37□□□□□ -1.07
UPF3B-205ENST00000636792 SRGNP10124 158 aa8.36□□□□□ -1.07
UPF3B-205ENST00000636792 NPR1P16066 1061 aa8.36□□□□□ -1.07
UPF3B-205ENST00000636792 ALDH1B1P30837 517 aa8.36□□□□□ -1.07
UPF3B-205ENST00000636792 FOXO4P98177 505 aa8.36□□□□□ -1.07
UPF3B-205ENST00000636792 HSP90AB4PQ58FF6 505 aa8.36□□□□□ -1.07
UPF3B-205ENST00000636792 NUTM1Q86Y26 1132 aa8.36□□□□□ -1.07
UPF3B-205ENST00000636792 ANKRD44Q8N8A2 993 aa8.36□□□□□ -1.07
UPF3B-205ENST00000636792 TTLL11Q8NHH1 800 aa8.36□□□□□ -1.07
UPF3B-205ENST00000636792 BBXQ8WY36 941 aaPredicted RBP8.36□□□□□ -1.07
UPF3B-205ENST00000636792 MASTLQ96GX5 879 aa8.36□□□□□ -1.07
UPF3B-205ENST00000636792 SUCLG2Q96I99 432 aa8.36□□□□□ -1.07
UPF3B-205ENST00000636792 CRAMP1Q96RY5 1269 aa8.36□□□□□ -1.07
UPF3B-205ENST00000636792 CRBNQ96SW2 442 aa8.36□□□□□ -1.07
UPF3B-205ENST00000636792 BICC1Q9H694 974 aaKnown RBP8.36□□□□□ -1.07
UPF3B-205ENST00000636792 LTBP1Q14766 1721 aa8.36□□□□□ -1.07
UPF3B-205ENST00000636792 ANKRD18BA2A2Z9 1011 aa8.35□□□□□ -1.07
UPF3B-205ENST00000636792 H0YIN7 160 aa8.35□□□□□ -1.07
UPF3B-205ENST00000636792 IFIT5Q13325 482 aaKnown RBP8.35□□□□□ -1.07
UPF3B-205ENST00000636792 HDAC1Q13547 482 aaPredicted RBP8.35□□□□□ -1.07
UPF3B-205ENST00000636792 CCDC57Q2TAC2 916 aa8.35□□□□□ -1.07
UPF3B-205ENST00000636792 SOGA3Q5TF21 947 aa8.35□□□□□ -1.07
UPF3B-205ENST00000636792 CC2D2BQ6DHV5 1058 aa8.35□□□□□ -1.07
UPF3B-205ENST00000636792 CEP85Q6P2H3 762 aa8.35□□□□□ -1.07
UPF3B-205ENST00000636792 DDX46Q7L014 1031 aaKnown RBP8.35□□□□□ -1.07
UPF3B-205ENST00000636792 ANKLE1Q8NAG6 615 aa8.35□□□□□ -1.07
UPF3B-205ENST00000636792 SSH3Q8TE77 659 aa8.35□□□□□ -1.07
UPF3B-205ENST00000636792 RPGRQ92834 1020 aaKnown RBP8.35□□□□□ -1.07
UPF3B-205ENST00000636792 CNKSR1Q969H4 720 aa8.35□□□□□ -1.07
UPF3B-205ENST00000636792 RBM17Q96I25 401 aaKnown RBP8.35□□□□□ -1.07
UPF3B-205ENST00000636792 KAZALD1Q96I82 304 aa8.35□□□□□ -1.07
UPF3B-205ENST00000636792 LRRFIP2Q9Y608 721 aaKnown RBP8.35□□□□□ -1.07
UPF3B-205ENST00000636792 FER1L6Q2WGJ9 1857 aa8.34□□□□□ -1.07
UPF3B-205ENST00000636792 FAM187AA6NFU0 413 aa8.34□□□□□ -1.07
UPF3B-205ENST00000636792 BBOX1O75936 387 aa8.34□□□□□ -1.07
UPF3B-205ENST00000636792 CIAO1O76071 339 aa8.34□□□□□ -1.07
UPF3B-205ENST00000636792 IGHMBP2P38935 993 aaKnown RBP8.34□□□□□ -1.07
UPF3B-205ENST00000636792 ATP8B2P98198 1209 aa8.34□□□□□ -1.07
UPF3B-205ENST00000636792 GRAPQ13588 217 aa8.34□□□□□ -1.07
UPF3B-205ENST00000636792 BLOC1S3Q6QNY0 202 aa8.34□□□□□ -1.07
UPF3B-205ENST00000636792 LMBR1LQ6UX01 489 aa8.34□□□□□ -1.07
UPF3B-205ENST00000636792 ERC1Q8IUD2 1116 aa8.34□□□□□ -1.07
UPF3B-205ENST00000636792 GRAPLQ8TC17 118 aaPredicted RBP8.34□□□□□ -1.07
UPF3B-205ENST00000636792 COPRSQ9NQ92 184 aa8.34□□□□□ -1.07
UPF3B-205ENST00000636792 DUOX1Q9NRD9 1551 aa8.34□□□□□ -1.07
UPF3B-205ENST00000636792 SLX4Q8IY92 1834 aa8.33□□□□□ -1.08
UPF3B-205ENST00000636792 FAM177BA6PVY3 158 aa8.33□□□□□ -1.08
UPF3B-205ENST00000636792 SRGAP3O43295 1099 aa8.33□□□□□ -1.08
UPF3B-205ENST00000636792 HCLS1P14317 486 aaPredicted RBP8.33□□□□□ -1.08
UPF3B-205ENST00000636792 ITGA6P23229 1130 aa8.33□□□□□ -1.08
UPF3B-205ENST00000636792 ZNF697Q5TEC3 545 aa8.33□□□□□ -1.08
UPF3B-205ENST00000636792 ANKRD18AQ8IVF6 992 aa8.33□□□□□ -1.08
UPF3B-205ENST00000636792 GCC1Q96CN9 775 aa8.33□□□□□ -1.08
UPF3B-205ENST00000636792 BSDC1Q9NW68 430 aaPredicted RBP8.33□□□□□ -1.08
UPF3B-205ENST00000636792 PPP1R1BQ9UD71 204 aaPredicted RBP8.33□□□□□ -1.08
UPF3B-205ENST00000636792 NOP58Q9Y2X3 529 aaKnown RBP8.33□□□□□ -1.08
UPF3B-205ENST00000636792 TAF1P21675 1872 aa8.32□□□□□ -1.08
UPF3B-205ENST00000636792 RAB11FIP3O75154 756 aa8.32□□□□□ -1.08
UPF3B-205ENST00000636792 FAM161AQ3B820 660 aa8.32□□□□□ -1.08
UPF3B-205ENST00000636792 KMT5BQ4FZB7 885 aa8.32□□□□□ -1.08
UPF3B-205ENST00000636792 TAF7LQ5H9L4 462 aa8.32□□□□□ -1.08
UPF3B-205ENST00000636792 RTL5Q5HYW3 569 aaPredicted RBP8.32□□□□□ -1.08
UPF3B-205ENST00000636792 EPHA10Q5JZY3 1008 aa8.32□□□□□ -1.08
UPF3B-205ENST00000636792 C2CD5Q86YS7 1000 aa8.32□□□□□ -1.08
UPF3B-205ENST00000636792 EXOC6Q8TAG9 804 aa8.32□□□□□ -1.08
UPF3B-205ENST00000636792 TMX4Q9H1E5 349 aaPredicted RBP8.32□□□□□ -1.08
UPF3B-205ENST00000636792 RWDD1Q9H446 243 aaPredicted RBP8.32□□□□□ -1.08
UPF3B-205ENST00000636792 GREM2Q9H772 168 aa8.32□□□□□ -1.08
UPF3B-205ENST00000636792 NPDC1Q9NQX5 325 aaPredicted RBP8.32□□□□□ -1.08
UPF3B-205ENST00000636792 PIM2Q9P1W9 311 aa8.32□□□□□ -1.08
UPF3B-205ENST00000636792 MYH13Q9UKX3 1938 aa8.32□□□□□ -1.08
UPF3B-205ENST00000636792 DICER1Q9UPY3 1922 aaKnown RBP8.32□□□□□ -1.08
UPF3B-205ENST00000636792 MROH5Q6ZUA9 1318 aa8.31□□□□□ -1.08
UPF3B-205ENST00000636792 PSME4Q14997 1843 aa8.31□□□□□ -1.08
UPF3B-205ENST00000636792 SNED1Q8TER0 1413 aa8.31□□□□□ -1.08
UPF3B-205ENST00000636792 IL15P40933 162 aaPredicted RBP8.31□□□□□ -1.08
UPF3B-205ENST00000636792 RFX5P48382 616 aaPredicted RBP8.31□□□□□ -1.08
UPF3B-205ENST00000636792 RPS8P62241 208 aaKnown RBP8.31□□□□□ -1.08
UPF3B-205ENST00000636792 PTPN12Q05209 780 aaKnown RBP8.31□□□□□ -1.08
UPF3B-205ENST00000636792 SYNE4Q8N205 404 aa8.31□□□□□ -1.08
UPF3B-205ENST00000636792 TTLL6Q8N841 843 aa8.31□□□□□ -1.08
UPF3B-205ENST00000636792 EMID1Q96A84 441 aaPredicted RBP8.31□□□□□ -1.08
UPF3B-205ENST00000636792 MPHOSPH8Q99549 860 aa8.31□□□□□ -1.08
UPF3B-205ENST00000636792 ANKRD2Q9GZV1 360 aa8.31□□□□□ -1.08
UPF3B-205ENST00000636792 VPS33BQ9H267 617 aa8.31□□□□□ -1.08
UPF3B-205ENST00000636792 GPR108Q9NPR9 543 aa8.31□□□□□ -1.08
UPF3B-205ENST00000636792 PODXL2Q9NZ53 605 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms