RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 UQCRFS1P1P0C7P4 283 aa6.53□□□□□ -1.36
CHD2-224ENST00000636410 RPS12P25398 132 aaKnown RBP6.53□□□□□ -1.36
CHD2-224ENST00000636410 ARID4AP29374 1257 aaPredicted RBP6.53□□□□□ -1.36
CHD2-224ENST00000636410 FKBP1AP62942 108 aaKnown RBP6.53□□□□□ -1.36
CHD2-224ENST00000636410 GTF2IP78347 998 aa6.53□□□□□ -1.36
CHD2-224ENST00000636410 CCDC158Q5M9N0 1113 aa6.53□□□□□ -1.36
CHD2-224ENST00000636410 DACT2Q5SW24 774 aa6.53□□□□□ -1.36
CHD2-224ENST00000636410 TTLL5Q6EMB2 1281 aa6.53□□□□□ -1.36
CHD2-224ENST00000636410 RSBN1LQ6PCB5 846 aaPredicted RBP6.53□□□□□ -1.36
CHD2-224ENST00000636410 AGBL3Q8NEM8 1001 aa6.53□□□□□ -1.36
CHD2-224ENST00000636410 FBXW7Q969H0 707 aa6.53□□□□□ -1.36
CHD2-224ENST00000636410 ZNF512BQ96KM6 892 aaPredicted RBP6.53□□□□□ -1.36
CHD2-224ENST00000636410 CCDC8Q9H0W5 538 aaPredicted RBP6.53□□□□□ -1.36
CHD2-224ENST00000636410 DENND2AQ9ULE3 1009 aa6.53□□□□□ -1.36
CHD2-224ENST00000636410 IQSEC3Q9UPP2 1182 aaPredicted RBP6.53□□□□□ -1.36
CHD2-224ENST00000636410 MYO5AQ9Y4I1 1855 aaKnown RBP6.53□□□□□ -1.36
CHD2-224ENST00000636410 SALL1Q9NSC2 1324 aa6.52□□□□□ -1.37
CHD2-224ENST00000636410 IQCA1LA6NCM1 817 aa6.52□□□□□ -1.37
CHD2-224ENST00000636410 SMARCA5O60264 1052 aaPredicted RBP6.52□□□□□ -1.37
CHD2-224ENST00000636410 LMOD1P29536 600 aaPredicted RBP6.52□□□□□ -1.37
CHD2-224ENST00000636410 GMPSP49915 693 aaPredicted RBP6.52□□□□□ -1.37
CHD2-224ENST00000636410 SCNN1DP51172 638 aa6.52□□□□□ -1.37
CHD2-224ENST00000636410 CHAF1AQ13111 956 aaPredicted RBP6.52□□□□□ -1.37
CHD2-224ENST00000636410 RASGRF1Q13972 1273 aa6.52□□□□□ -1.37
CHD2-224ENST00000636410 MFSD14BQ5SR56 506 aa6.52□□□□□ -1.37
CHD2-224ENST00000636410 TTC39AQ5SRH9 613 aa6.52□□□□□ -1.37
CHD2-224ENST00000636410 ERICH6BQ5W0A0 696 aa6.52□□□□□ -1.37
CHD2-224ENST00000636410 ZNF784Q8NCA9 323 aaPredicted RBP6.52□□□□□ -1.37
CHD2-224ENST00000636410 ZNF526Q8TF50 670 aaPredicted RBP6.52□□□□□ -1.37
CHD2-224ENST00000636410 TBC1D22AQ8WUA7 517 aa6.52□□□□□ -1.37
CHD2-224ENST00000636410 DPF2Q92785 391 aa6.52□□□□□ -1.37
CHD2-224ENST00000636410 GPBP1L1Q9HC44 474 aaPredicted RBP6.52□□□□□ -1.37
CHD2-224ENST00000636410 GPRC5DQ9NZD1 345 aa6.52□□□□□ -1.37
CHD2-224ENST00000636410 ZBTB47Q9UFB7 747 aaPredicted RBP6.52□□□□□ -1.37
CHD2-224ENST00000636410 ZBTB12Q9Y330 459 aaPredicted RBP6.52□□□□□ -1.37
CHD2-224ENST00000636410 AK9Q5TCS8 1911 aa6.52□□□□□ -1.37
CHD2-224ENST00000636410 MYH2Q9UKX2 1941 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 POTECB2RU33 542 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 VEGFAP15692 232 aaPredicted RBP6.51□□□□□ -1.37
CHD2-224ENST00000636410 MCAMP43121 646 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 MMP14P50281 582 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 NUCB1Q02818 461 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 SCARF1Q14162 830 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 ANKRD45Q5TZF3 282 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 KIAA0825Q8IV33 1275 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 MICALL2Q8IY33 904 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 ZGPATQ8N5A5 531 aaKnown RBP6.51□□□□□ -1.37
CHD2-224ENST00000636410 CERS5Q8N5B7 392 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 SPATA5Q8NB90 893 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 WDR66Q8TBY9 1149 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.51□□□□□ -1.37
CHD2-224ENST00000636410 GMLQ99445 158 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 MXD3Q9BW11 206 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 BCL11AQ9H165 835 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 NMRK2Q9NPI5 230 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 HMG20BQ9P0W2 317 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 CNOT7Q9UIV1 285 aaKnown RBP6.51□□□□□ -1.37
CHD2-224ENST00000636410 HACL1Q9UJ83 578 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 JAG2Q9Y219 1238 aa6.51□□□□□ -1.37
CHD2-224ENST00000636410 MAST3O60307 1309 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 TTC41PQ6P2S7 1318 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 SALL3Q9BXA9 1300 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 FOCADQ5VW36 1801 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 CDK5RAP2Q96SN8 1893 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 USP17L8P0C7I0 530 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 ATP5JP18859 108 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 MX1P20591 662 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 EPHX2P34913 555 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 ZNF280AP59817 542 aaPredicted RBP6.5□□□□□ -1.37
CHD2-224ENST00000636410 B4GALNT3Q6L9W6 998 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 PI16Q6UXB8 463 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 CENPQQ7L2Z9 268 aaPredicted RBP6.5□□□□□ -1.37
CHD2-224ENST00000636410 CHD1LQ86WJ1 897 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 OGFOD1Q8N543 542 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 GPATCH3Q96I76 525 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 LNPKQ9C0E8 428 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 TAF1DQ9H5J8 278 aaPredicted RBP6.5□□□□□ -1.37
CHD2-224ENST00000636410 RRAGCQ9HB90 399 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 ADARB2Q9NS39 739 aaKnown RBP6.5□□□□□ -1.37
CHD2-224ENST00000636410 ECHDC1Q9NTX5 307 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 HDAC9Q9UKV0 1011 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 SUGT1Q9Y2Z0 365 aa6.5□□□□□ -1.37
CHD2-224ENST00000636410 SHTN1A0MZ66 631 aa6.49□□□□□ -1.37
CHD2-224ENST00000636410 F8W031 263 aaPredicted RBP6.49□□□□□ -1.37
CHD2-224ENST00000636410 H7C1D1 291 aa6.49□□□□□ -1.37
CHD2-224ENST00000636410 KIF3CO14782 793 aa6.49□□□□□ -1.37
CHD2-224ENST00000636410 ERC2O15083 957 aa6.49□□□□□ -1.37
CHD2-224ENST00000636410 IGSF3O75054 1194 aa6.49□□□□□ -1.37
CHD2-224ENST00000636410 LDHBP07195 334 aaKnown RBP6.49□□□□□ -1.37
CHD2-224ENST00000636410 PRDX5P30044 214 aa6.49□□□□□ -1.37
CHD2-224ENST00000636410 EPS15P42566 896 aa6.49□□□□□ -1.37
CHD2-224ENST00000636410 ZAP70P43403 619 aa6.49□□□□□ -1.37
CHD2-224ENST00000636410 KIF4BQ2VIQ3 1234 aa6.49□□□□□ -1.37
CHD2-224ENST00000636410 SPTY2D1Q68D10 685 aaPredicted RBP6.49□□□□□ -1.37
CHD2-224ENST00000636410 USP50Q70EL3 339 aaPredicted RBP6.49□□□□□ -1.37
CHD2-224ENST00000636410 PNMA8AQ86V59 439 aaPredicted RBP6.49□□□□□ -1.37
CHD2-224ENST00000636410 C16orf71Q8IYS4 520 aaPredicted RBP6.49□□□□□ -1.37
CHD2-224ENST00000636410 OTUD7AQ8TE49 926 aaPredicted RBP6.49□□□□□ -1.37
CHD2-224ENST00000636410 CCDC136Q96JN2 1154 aa6.49□□□□□ -1.37
CHD2-224ENST00000636410 MYOZ2Q9NPC6 264 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms