RNA–Protein interactions for RNA: ENST00000636193.1

SYNGAP1-213, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-213ENST00000636193 GLI2P10070 1586 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 CUBNO60494 3623 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 TNRC6CQ9HCJ0 1690 aaKnown RBP0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 NBPF26B4DH59 902 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 MASP2O00187 686 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 CTIFO43310 598 aaKnown RBP0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 FKTNO75072 461 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 TBC1D8O95759 1140 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 ERBB2P04626 1255 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 FSTP19883 344 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 DCTP40126 519 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 RFX5P48382 616 aaPredicted RBP0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 HNRNPA3P51991 378 aaKnown RBP0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 KIF23Q02241 960 aaPredicted RBP0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 CBLBQ13191 982 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 NEUROD2Q15784 382 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 FBLN7Q53RD9 439 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 VAX1Q5SQQ9 334 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 MEPCEQ7L2J0 689 aaKnown RBP0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 C12orf40Q86WS4 652 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 NETO1Q8TDF5 533 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 EPS8L1Q8TE68 723 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 HERVK_113Q902F9 699 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 HLA-CQ95604 372 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 ASIC4Q96FT7 647 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 MUC4Q99102 2169 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 PRDM12Q9H4Q4 367 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 GSX1Q9H4S2 264 aaPredicted RBP0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 ZNF576Q9H609 170 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 SCUBE2Q9NQ36 999 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 DDX21Q9NR30 783 aaKnown RBP eCLIP0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 DENND2AQ9ULE3 1009 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 PRR12Q9ULL5 1215 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 KIAA1217Q5T5P2 1943 aa0.68□□□□□ -2.3
SYNGAP1-213ENST00000636193 CNTNAP2Q9UHC6 1331 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 SSC5DA1L4H1 1573 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 PEG3Q9GZU2 1588 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 REREQ9P2R6 1566 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 LOC102724428A0A0B4J2F2 783 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 A0A0G2JLM5 398 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 LOC105378220A0A1B0GUY1 285 aaPredicted RBP0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 MEGF11A6BM72 1044 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 G3V4G9 280 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 GPR25O00155 361 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 TRAF5O00463 557 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 IRS4O14654 1257 aaPredicted RBP0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 PLSCR1O15162 318 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 MSH5O43196 834 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 FCHSD2O94868 740 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 AFPP02771 609 aaKnown RBP0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 COL8A1P27658 744 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 SIK1P57059 783 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 SRSF6Q13247 344 aaKnown RBP0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 ZXDCQ2QGD7 858 aaPredicted RBP0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 LELP1Q5T871 98 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 GPR157Q5UAW9 335 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 C1QL3Q5VWW1 255 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 KRTAP5-3Q6L8H2 238 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 Q71RC1 249 aaPredicted RBP0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 RTF1Q92541 710 aaKnown RBP0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 ZNF333Q96JL9 665 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 LBHD1Q9BQE6 289 aaPredicted RBP0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 APOL5Q9BWW9 433 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 TLR8Q9NR97 1041 aaKnown RBP0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 STAG3Q9UJ98 1225 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 PTPN22Q9Y2R2 807 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 RREB1Q92766 1687 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 PRRC2AP48634 2157 aaKnown RBP0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 TMEM94Q12767 1356 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 COL6A6A6NMZ7 2263 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 PKDREJQ9NTG1 2253 aa0.67□□□□□ -2.3
SYNGAP1-213ENST00000636193 ZNF541Q9H0D2 1346 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 ADAMTS12P58397 1594 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 ZNF646O15015 1829 aaPredicted RBP0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 TICRRQ7Z2Z1 1910 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 MUC12Q9UKN1 5478 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 USH2AO75445 5202 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 ADAMTSL1Q8N6G6 1762 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 SHTN1A0MZ66 631 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 J3QL48 77 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 PROM1O43490 865 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 FARP2O94887 1054 aaPredicted RBP0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 CFPP27918 469 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 ZNF76P36508 570 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 NOP2P46087 812 aaKnown RBP0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 EIF5P55010 431 aaKnown RBP0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 HNRNPDQ14103 355 aaKnown RBP0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 VPS72Q15906 364 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 TCTN1Q2MV58 587 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 SLC9C1Q4G0N8 1177 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 MAP1SQ66K74 1059 aaPredicted RBP0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 TRIM65Q6PJ69 517 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 TBC1D9Q6ZT07 1266 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 GRINAQ7Z429 371 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 ULK2Q8IYT8 1036 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 RSAD2Q8WXG1 361 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 C18orf15Q96N68 181 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 ALPK1Q96QP1 1244 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 SCNM1Q9BWG6 230 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 STK17AQ9UEE5 414 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms