RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 LDHDQ86WU2 507 aa12.03□□□□□ -0.48
LINC00339-210ENST00000635675 SMC1BQ8NDV3 1235 aa12.03□□□□□ -0.48
LINC00339-210ENST00000635675 FBXW7Q969H0 707 aa12.03□□□□□ -0.48
LINC00339-210ENST00000635675 IQSEC3Q9UPP2 1182 aaPredicted RBP12.03□□□□□ -0.48
LINC00339-210ENST00000635675 EXOC6BQ9Y2D4 811 aa12.03□□□□□ -0.48
LINC00339-210ENST00000635675 ADAMTSL1Q8N6G6 1762 aa12.02□□□□□ -0.48
LINC00339-210ENST00000635675 ZBTB22O15209 634 aa12.02□□□□□ -0.49
LINC00339-210ENST00000635675 FSTL1Q12841 308 aa12.02□□□□□ -0.49
LINC00339-210ENST00000635675 HSP90AB4PQ58FF6 505 aa12.02□□□□□ -0.49
LINC00339-210ENST00000635675 CHADLQ6NUI6 762 aa12.02□□□□□ -0.49
LINC00339-210ENST00000635675 SAMD7Q7Z3H4 446 aa12.02□□□□□ -0.49
LINC00339-210ENST00000635675 TRPM4Q8TD43 1214 aa12.02□□□□□ -0.49
LINC00339-210ENST00000635675 XAGE2Q96GT9 111 aa12.02□□□□□ -0.49
LINC00339-210ENST00000635675 NEUROD6Q96NK8 337 aa12.02□□□□□ -0.49
LINC00339-210ENST00000635675 JAG2Q9Y219 1238 aa12.02□□□□□ -0.49
LINC00339-210ENST00000635675 PCDHB15Q9Y5E8 787 aa12.02□□□□□ -0.49
LINC00339-210ENST00000635675 ARAP2Q8WZ64 1704 aa12.01□□□□□ -0.49
LINC00339-210ENST00000635675 EGFRP00533 1210 aa12.01□□□□□ -0.49
LINC00339-210ENST00000635675 PHKA1P46020 1223 aa12.01□□□□□ -0.49
LINC00339-210ENST00000635675 MMP14P50281 582 aa12.01□□□□□ -0.49
LINC00339-210ENST00000635675 TNNI3KQ59H18 835 aa12.01□□□□□ -0.49
LINC00339-210ENST00000635675 CCDC102BQ68D86 513 aa12.01□□□□□ -0.49
LINC00339-210ENST00000635675 ERC1Q8IUD2 1116 aa12.01□□□□□ -0.49
LINC00339-210ENST00000635675 GNL3LQ9NVN8 582 aaKnown RBP12.01□□□□□ -0.49
LINC00339-210ENST00000635675 PGAP2Q9UHJ9 254 aa12.01□□□□□ -0.49
LINC00339-210ENST00000635675 CLEC11AQ9Y240 323 aa12.01□□□□□ -0.49
LINC00339-210ENST00000635675 FPGT-TNNI3KV9GXZ4 949 aa12.01□□□□□ -0.49
LINC00339-210ENST00000635675 FRAT2O75474 233 aaPredicted RBP12□□□□□ -0.49
LINC00339-210ENST00000635675 TBC1D10BQ4KMP7 808 aaPredicted RBP12□□□□□ -0.49
LINC00339-210ENST00000635675 MFSD14BQ5SR56 506 aa12□□□□□ -0.49
LINC00339-210ENST00000635675 RBM26Q5T8P6 1007 aaKnown RBP12□□□□□ -0.49
LINC00339-210ENST00000635675 KIAA0825Q8IV33 1275 aa12□□□□□ -0.49
LINC00339-210ENST00000635675 OGFOD1Q8N543 542 aa12□□□□□ -0.49
LINC00339-210ENST00000635675 ZC3H15Q8WU90 426 aaKnown RBP12□□□□□ -0.49
LINC00339-210ENST00000635675 SEMA3EO15041 775 aa11.99□□□□□ -0.49
LINC00339-210ENST00000635675 RAB11FIP3O75154 756 aa11.99□□□□□ -0.49
LINC00339-210ENST00000635675 ITGBL1O95965 494 aaPredicted RBP11.99□□□□□ -0.49
LINC00339-210ENST00000635675 CHAF1AQ13111 956 aaPredicted RBP11.99□□□□□ -0.49
LINC00339-210ENST00000635675 AAMPQ13685 434 aa11.99□□□□□ -0.49
LINC00339-210ENST00000635675 RHPN1Q8TCX5 695 aa11.99□□□□□ -0.49
LINC00339-210ENST00000635675 TBC1D22AQ8WUA7 517 aa11.99□□□□□ -0.49
LINC00339-210ENST00000635675 EAF2Q96CJ1 260 aaPredicted RBP11.99□□□□□ -0.49
LINC00339-210ENST00000635675 DCTPP1Q9H773 170 aa11.99□□□□□ -0.49
LINC00339-210ENST00000635675 MYOZ2Q9NPC6 264 aa11.99□□□□□ -0.49
LINC00339-210ENST00000635675 GRIK5Q16478 980 aa11.98□□□□□ -0.49
LINC00339-210ENST00000635675 KIF4BQ2VIQ3 1234 aa11.98□□□□□ -0.49
LINC00339-210ENST00000635675 GORABQ5T7V8 394 aa11.98□□□□□ -0.49
LINC00339-210ENST00000635675 MAP1SQ66K74 1059 aaPredicted RBP11.98□□□□□ -0.49
LINC00339-210ENST00000635675 CNTROBQ8N137 903 aa11.98□□□□□ -0.49
LINC00339-210ENST00000635675 WDR66Q8TBY9 1149 aa11.98□□□□□ -0.49
LINC00339-210ENST00000635675 KIF1BPQ96EK5 621 aa11.98□□□□□ -0.49
LINC00339-210ENST00000635675 DBNDD2Q9BQY9 259 aa11.98□□□□□ -0.49
LINC00339-210ENST00000635675 DENND2AQ9ULE3 1009 aa11.98□□□□□ -0.49
LINC00339-210ENST00000635675 COL1A1P02452 1464 aaPredicted RBP11.98□□□□□ -0.49
LINC00339-210ENST00000635675 APBB1O00213 710 aa11.97□□□□□ -0.49
LINC00339-210ENST00000635675 RASGRF1Q13972 1273 aa11.97□□□□□ -0.49
LINC00339-210ENST00000635675 EXOC6Q8TAG9 804 aa11.97□□□□□ -0.49
LINC00339-210ENST00000635675 ZBED3Q96IU2 234 aaPredicted RBP11.97□□□□□ -0.49
LINC00339-210ENST00000635675 CCDC8Q9H0W5 538 aaPredicted RBP11.97□□□□□ -0.49
LINC00339-210ENST00000635675 IL1RAPL2Q9NP60 686 aa11.97□□□□□ -0.49
LINC00339-210ENST00000635675 DBNLQ9UJU6 430 aaKnown RBP11.97□□□□□ -0.49
LINC00339-210ENST00000635675 HDAC9Q9UKV0 1011 aa11.97□□□□□ -0.49
LINC00339-210ENST00000635675 MYH13Q9UKX3 1938 aa11.97□□□□□ -0.49
LINC00339-210ENST00000635675 PDS5AQ29RF7 1337 aaKnown RBP11.97□□□□□ -0.49
LINC00339-210ENST00000635675 F8W031 263 aaPredicted RBP11.96□□□□□ -0.49
LINC00339-210ENST00000635675 WNT10BO00744 389 aa11.96□□□□□ -0.49
LINC00339-210ENST00000635675 ARID4AP29374 1257 aaPredicted RBP11.96□□□□□ -0.49
LINC00339-210ENST00000635675 SCARF1Q14162 830 aa11.96□□□□□ -0.49
LINC00339-210ENST00000635675 NBPF9Q3BBW0 867 aa11.96□□□□□ -0.49
LINC00339-210ENST00000635675 AACSQ86V21 672 aa11.96□□□□□ -0.49
LINC00339-210ENST00000635675 MTMR14Q8NCE2 650 aa11.96□□□□□ -0.49
LINC00339-210ENST00000635675 TLR7Q9NYK1 1049 aaKnown RBP11.96□□□□□ -0.49
LINC00339-210ENST00000635675 TTF2Q9UNY4 1162 aaKnown RBP11.96□□□□□ -0.49
LINC00339-210ENST00000635675 SUGT1Q9Y2Z0 365 aa11.96□□□□□ -0.49
LINC00339-210ENST00000635675 ASTN2O75129 1339 aaPredicted RBP11.96□□□□□ -0.5
LINC00339-210ENST00000635675 PASKQ96RG2 1323 aa11.96□□□□□ -0.5
LINC00339-210ENST00000635675 SALL1Q9NSC2 1324 aa11.96□□□□□ -0.5
LINC00339-210ENST00000635675 POLR2AP24928 1970 aaKnown RBP11.96□□□□□ -0.5
LINC00339-210ENST00000635675 UQCRFS1P1P0C7P4 283 aa11.95□□□□□ -0.5
LINC00339-210ENST00000635675 HSPA6P17066 643 aa11.95□□□□□ -0.5
LINC00339-210ENST00000635675 HDLBPQ00341 1268 aaKnown RBP11.95□□□□□ -0.5
LINC00339-210ENST00000635675 CCDC158Q5M9N0 1113 aa11.95□□□□□ -0.5
LINC00339-210ENST00000635675 CLASRPQ8N2M8 674 aaKnown RBP11.95□□□□□ -0.5
LINC00339-210ENST00000635675 ZNF512BQ96KM6 892 aaPredicted RBP11.95□□□□□ -0.5
LINC00339-210ENST00000635675 MRIQ9BWK5 157 aa11.95□□□□□ -0.5
LINC00339-210ENST00000635675 HMG20BQ9P0W2 317 aa11.95□□□□□ -0.5
LINC00339-210ENST00000635675 SERPINA10Q9UK55 444 aa11.95□□□□□ -0.5
LINC00339-210ENST00000635675 MCAMP43121 646 aa11.94□□□□□ -0.5
LINC00339-210ENST00000635675 HDAC1Q13547 482 aaPredicted RBP11.94□□□□□ -0.5
LINC00339-210ENST00000635675 DLGAP5Q15398 846 aa11.94□□□□□ -0.5
LINC00339-210ENST00000635675 CFAP100Q494V2 611 aa11.94□□□□□ -0.5
LINC00339-210ENST00000635675 CDC37L1Q7L3B6 337 aa11.94□□□□□ -0.5
LINC00339-210ENST00000635675 SPATA5Q8NB90 893 aa11.94□□□□□ -0.5
LINC00339-210ENST00000635675 PRMT6Q96LA8 375 aaPredicted RBP11.94□□□□□ -0.5
LINC00339-210ENST00000635675 LRRCC1Q9C099 1032 aa11.94□□□□□ -0.5
LINC00339-210ENST00000635675 PCDHAC2Q9Y5I4 1007 aa11.94□□□□□ -0.5
LINC00339-210ENST00000635675 CRKP46108 304 aa11.94□□□□□ -0.5
LINC00339-210ENST00000635675 TTC39AQ5SRH9 613 aa11.94□□□□□ -0.5
LINC00339-210ENST00000635675 ANGEL2Q5VTE6 544 aaKnown RBP11.94□□□□□ -0.5
LINC00339-210ENST00000635675 PI16Q6UXB8 463 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms