RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 PLIN1O60240 522 aa19.7■□□□□ 0.74
SNRNP48-203ENST00000634363 VAMP4O75379 141 aa19.7■□□□□ 0.74
SNRNP48-203ENST00000634363 IFIT5Q13325 482 aaKnown RBP19.7■□□□□ 0.74
SNRNP48-203ENST00000634363 CDCA7LQ96GN5 454 aa19.7■□□□□ 0.74
SNRNP48-203ENST00000634363 CACNA1FO60840 1977 aa19.7■□□□□ 0.74
SNRNP48-203ENST00000634363 SREBF2Q12772 1141 aa19.69■□□□□ 0.74
SNRNP48-203ENST00000634363 PKN2Q16513 984 aaKnown RBP19.69■□□□□ 0.74
SNRNP48-203ENST00000634363 SLC10A4Q96EP9 437 aa19.69■□□□□ 0.74
SNRNP48-203ENST00000634363 DEFB129Q9H1M3 183 aa19.69■□□□□ 0.74
SNRNP48-203ENST00000634363 FOXO4P98177 505 aa19.68■□□□□ 0.74
SNRNP48-203ENST00000634363 CERS5Q8N5B7 392 aa19.68■□□□□ 0.74
SNRNP48-203ENST00000634363 ZBED3Q96IU2 234 aaPredicted RBP19.68■□□□□ 0.74
SNRNP48-203ENST00000634363 JAG2Q9Y219 1238 aa19.68■□□□□ 0.74
SNRNP48-203ENST00000634363 PCDHAC2Q9Y5I4 1007 aa19.68■□□□□ 0.74
SNRNP48-203ENST00000634363 TAF7LQ5H9L4 462 aa19.67■□□□□ 0.74
SNRNP48-203ENST00000634363 LDLRAD1Q5T700 205 aa19.67■□□□□ 0.74
SNRNP48-203ENST00000634363 CLRN2A0PK11 232 aa19.66■□□□□ 0.74
SNRNP48-203ENST00000634363 MYO1BO43795 1136 aa19.66■□□□□ 0.74
SNRNP48-203ENST00000634363 RBM5P52756 815 aaKnown RBP eCLIP19.66■□□□□ 0.74
SNRNP48-203ENST00000634363 CFAP100Q494V2 611 aa19.66■□□□□ 0.74
SNRNP48-203ENST00000634363 SPRYD7Q5W111 196 aa19.66■□□□□ 0.74
SNRNP48-203ENST00000634363 LMBR1LQ6UX01 489 aa19.66■□□□□ 0.74
SNRNP48-203ENST00000634363 ZNF804AQ7Z570 1209 aa19.66■□□□□ 0.74
SNRNP48-203ENST00000634363 ZNF594Q96JF6 807 aaPredicted RBP19.66■□□□□ 0.74
SNRNP48-203ENST00000634363 R3HDMLQ9H3Y0 253 aa19.66■□□□□ 0.74
SNRNP48-203ENST00000634363 PPP1R12BO60237 982 aaPredicted RBP19.65■□□□□ 0.74
SNRNP48-203ENST00000634363 FKTNO75072 461 aa19.65■□□□□ 0.74
SNRNP48-203ENST00000634363 CCDC57Q2TAC2 916 aa19.65■□□□□ 0.74
SNRNP48-203ENST00000634363 LDHAL6AQ6ZMR3 332 aa19.65■□□□□ 0.74
SNRNP48-203ENST00000634363 VEZTQ9HBM0 779 aa19.65■□□□□ 0.74
SNRNP48-203ENST00000634363 CNNM1Q9NRU3 951 aa19.65■□□□□ 0.74
SNRNP48-203ENST00000634363 BEND3Q5T5X7 828 aa19.64■□□□□ 0.73
SNRNP48-203ENST00000634363 TRMT2AQ8IZ69 625 aaKnown RBP19.64■□□□□ 0.73
SNRNP48-203ENST00000634363 CLMNQ96JQ2 1002 aa19.64■□□□□ 0.73
SNRNP48-203ENST00000634363 PRMT6Q96LA8 375 aaPredicted RBP19.64■□□□□ 0.73
SNRNP48-203ENST00000634363 ZBED9Q6R2W3 1325 aa19.64■□□□□ 0.73
SNRNP48-203ENST00000634363 IRS2Q9Y4H2 1338 aa19.63■□□□□ 0.73
SNRNP48-203ENST00000634363 IL1R1P14778 569 aa19.63■□□□□ 0.73
SNRNP48-203ENST00000634363 EPHA10Q5JZY3 1008 aa19.63■□□□□ 0.73
SNRNP48-203ENST00000634363 C15orf52Q6ZUT6 534 aaKnown RBP19.63■□□□□ 0.73
SNRNP48-203ENST00000634363 MTMR14Q8NCE2 650 aa19.63■□□□□ 0.73
SNRNP48-203ENST00000634363 C9orf78Q9NZ63 289 aaPredicted RBP19.63■□□□□ 0.73
SNRNP48-203ENST00000634363 ECM29Q5VYK3 1845 aa19.62■□□□□ 0.73
SNRNP48-203ENST00000634363 MANSC4A6NHS7 340 aaPredicted RBP19.62■□□□□ 0.73
SNRNP48-203ENST00000634363 INHBEP58166 350 aa19.62■□□□□ 0.73
SNRNP48-203ENST00000634363 SUPT20HL1Q3ZLR7 823 aa19.62■□□□□ 0.73
SNRNP48-203ENST00000634363 NOM1Q5C9Z4 860 aaKnown RBP19.62■□□□□ 0.73
SNRNP48-203ENST00000634363 FBXO46Q6PJ61 603 aaPredicted RBP19.62■□□□□ 0.73
SNRNP48-203ENST00000634363 SLC4A10Q6U841 1118 aa19.62■□□□□ 0.73
SNRNP48-203ENST00000634363 A0A1B0GUL6 1792 aa19.62■□□□□ 0.73
SNRNP48-203ENST00000634363 PDE4DIPQ5VU43 2346 aa19.61■□□□□ 0.73
SNRNP48-203ENST00000634363 SPDYE2BA6NHP3 402 aa19.61■□□□□ 0.73
SNRNP48-203ENST00000634363 GRM8O00222 908 aa19.61■□□□□ 0.73
SNRNP48-203ENST00000634363 ALDH1A1P00352 501 aa19.61■□□□□ 0.73
SNRNP48-203ENST00000634363 SPDYE6P0CI01 402 aa19.61■□□□□ 0.73
SNRNP48-203ENST00000634363 NBPF12Q5TAG4 269 aaPredicted RBP19.61■□□□□ 0.73
SNRNP48-203ENST00000634363 IFNL1Q8IU54 200 aa19.61■□□□□ 0.73
SNRNP48-203ENST00000634363 PPP2R3BQ9Y5P8 575 aa19.61■□□□□ 0.73
SNRNP48-203ENST00000634363 TNRC18O15417 2968 aaPredicted RBP19.6■□□□□ 0.73
SNRNP48-203ENST00000634363 CT47B1P0C2W7 299 aaPredicted RBP19.6■□□□□ 0.73
SNRNP48-203ENST00000634363 WNK4Q96J92 1243 aa19.6■□□□□ 0.73
SNRNP48-203ENST00000634363 COL1A1P02452 1464 aaPredicted RBP19.6■□□□□ 0.73
SNRNP48-203ENST00000634363 AOX1Q06278 1338 aa19.59■□□□□ 0.73
SNRNP48-203ENST00000634363 FKBP1AP62942 108 aaKnown RBP19.59■□□□□ 0.73
SNRNP48-203ENST00000634363 RASA3Q14644 834 aa19.59■□□□□ 0.73
SNRNP48-203ENST00000634363 MAP3K11Q16584 847 aa19.59■□□□□ 0.73
SNRNP48-203ENST00000634363 CFHR5Q9BXR6 569 aa19.59■□□□□ 0.73
SNRNP48-203ENST00000634363 USP2O75604 605 aaPredicted RBP19.58■□□□□ 0.72
SNRNP48-203ENST00000634363 ZBTB48P10074 688 aaPredicted RBP19.58■□□□□ 0.72
SNRNP48-203ENST00000634363 GYG1P46976 350 aa19.58■□□□□ 0.72
SNRNP48-203ENST00000634363 IREB2P48200 963 aaKnown RBP19.58■□□□□ 0.72
SNRNP48-203ENST00000634363 MFSD14BQ5SR56 506 aa19.58■□□□□ 0.72
SNRNP48-203ENST00000634363 TRIM17Q9Y577 477 aa19.58■□□□□ 0.72
SNRNP48-203ENST00000634363 SSC5DA1L4H1 1573 aa19.57■□□□□ 0.72
SNRNP48-203ENST00000634363 IGF2BP3O00425 579 aaKnown RBP eCLIP19.57■□□□□ 0.72
SNRNP48-203ENST00000634363 TDRD3Q9H7E2 651 aaKnown RBP19.57■□□□□ 0.72
SNRNP48-203ENST00000634363 TTF2Q9UNY4 1162 aaKnown RBP19.57■□□□□ 0.72
SNRNP48-203ENST00000634363 HIBADHP31937 336 aaKnown RBP19.56■□□□□ 0.72
SNRNP48-203ENST00000634363 ALDH1L2Q3SY69 923 aa19.56■□□□□ 0.72
SNRNP48-203ENST00000634363 PRPF38BQ5VTL8 546 aaKnown RBP19.56■□□□□ 0.72
SNRNP48-203ENST00000634363 OTUD7BQ6GQQ9 843 aa19.56■□□□□ 0.72
SNRNP48-203ENST00000634363 PUS3Q9BZE2 481 aaKnown RBP19.56■□□□□ 0.72
SNRNP48-203ENST00000634363 SRCIN1Q9C0H9 1055 aa19.56■□□□□ 0.72
SNRNP48-203ENST00000634363 SMC4Q9NTJ3 1288 aa19.56■□□□□ 0.72
SNRNP48-203ENST00000634363 UBE4AQ14139 1066 aa19.55■□□□□ 0.72
SNRNP48-203ENST00000634363 ANKRD13AQ8IZ07 590 aa19.55■□□□□ 0.72
SNRNP48-203ENST00000634363 TDRD7Q8NHU6 1098 aaKnown RBP19.55■□□□□ 0.72
SNRNP48-203ENST00000634363 SSH1Q8WYL5 1049 aa19.55■□□□□ 0.72
SNRNP48-203ENST00000634363 FAM84BQ96KN1 310 aaPredicted RBP19.55■□□□□ 0.72
SNRNP48-203ENST00000634363 ZNF70Q9UC06 446 aaPredicted RBP19.55■□□□□ 0.72
SNRNP48-203ENST00000634363 FAM205AQ6ZU69 1335 aa19.54■□□□□ 0.72
SNRNP48-203ENST00000634363 TCP10L2B9ZVM9 353 aa19.54■□□□□ 0.72
SNRNP48-203ENST00000634363 ALDH1L1O75891 902 aa19.54■□□□□ 0.72
SNRNP48-203ENST00000634363 GJA5P36382 358 aa19.54■□□□□ 0.72
SNRNP48-203ENST00000634363 TNFAIP1Q13829 316 aa19.54■□□□□ 0.72
SNRNP48-203ENST00000634363 OTOP1Q7RTM1 612 aa19.54■□□□□ 0.72
SNRNP48-203ENST00000634363 VPS37DQ86XT2 251 aa19.54■□□□□ 0.72
SNRNP48-203ENST00000634363 MRPL50Q8N5N7 158 aaKnown RBP19.54■□□□□ 0.72
SNRNP48-203ENST00000634363 SUCLG2Q96I99 432 aa19.54■□□□□ 0.72
SNRNP48-203ENST00000634363 ELP3Q9H9T3 547 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms