RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 DMRTB1Q96MA1 342 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 CITED4Q96RK1 184 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 HERPUD2Q9BSE4 406 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 RTFDC1Q9BY42 306 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-213ENST00000630925 FAM13BQ9NYF5 915 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 KIAA1024Q9UPX6 916 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 MRVI1Q9Y6F6 885 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 GRIN2BQ13224 1484 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 WASLO00401 505 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-213ENST00000630925 CHL1O00533 1208 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 NAT2P11245 290 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 NCAM1P13591 858 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 TRIM27P14373 513 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 KCNA2P16389 499 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 PSMA3P25788 255 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 NEK2P51955 445 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 SIX5Q8N196 739 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 STK11IPQ8N1F8 1099 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 CFHR5Q9BXR6 569 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 ZNF652Q9Y2D9 606 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 SNX2O60749 519 aa5.85□□□□□ -1.47
SDCBP-213ENST00000630925 PPFIA3O75145 1194 aa5.85□□□□□ -1.47
SDCBP-213ENST00000630925 HNRNPCP07910 306 aaKnown RBP eCLIP5.85□□□□□ -1.47
SDCBP-213ENST00000630925 NAT1P18440 290 aa5.85□□□□□ -1.47
SDCBP-213ENST00000630925 BCAMP50895 628 aa5.85□□□□□ -1.47
SDCBP-213ENST00000630925 EIF5P55010 431 aaKnown RBP5.85□□□□□ -1.47
SDCBP-213ENST00000630925 MLC1Q15049 377 aa5.85□□□□□ -1.47
SDCBP-213ENST00000630925 ZKSCAN8Q15776 578 aaPredicted RBP5.85□□□□□ -1.47
SDCBP-213ENST00000630925 DACT2Q5SW24 774 aa5.85□□□□□ -1.47
SDCBP-213ENST00000630925 FAM102BQ5T8I3 360 aa5.85□□□□□ -1.47
SDCBP-213ENST00000630925 KIAA1614Q5VZ46 1190 aa5.85□□□□□ -1.47
SDCBP-213ENST00000630925 PADI6Q6TGC4 694 aa5.85□□□□□ -1.47
SDCBP-213ENST00000630925 CATIPQ7Z7H3 387 aa5.85□□□□□ -1.47
SDCBP-213ENST00000630925 ALKBH8Q96BT7 664 aaKnown RBP5.85□□□□□ -1.47
SDCBP-213ENST00000630925 FAM129BQ96TA1 746 aa5.85□□□□□ -1.47
SDCBP-213ENST00000630925 PCDHGC3Q9UN70 934 aa5.85□□□□□ -1.47
SDCBP-213ENST00000630925 RBM19Q9Y4C8 960 aaKnown RBP5.85□□□□□ -1.47
SDCBP-213ENST00000630925 AK5Q9Y6K8 562 aa5.85□□□□□ -1.47
SDCBP-213ENST00000630925 NBNO60934 754 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 FAM13AO94988 1023 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 NUCB1Q02818 461 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 APPL2Q8NEU8 664 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 PURBQ96QR8 312 aaKnown RBP5.84□□□□□ -1.47
SDCBP-213ENST00000630925 NUDT12Q9BQG2 462 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 CENPOQ9BU64 300 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 CCDC113Q9H0I3 377 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 SH3GLB2Q9NR46 395 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 DNAAF2Q9NVR5 837 aaKnown RBP5.84□□□□□ -1.47
SDCBP-213ENST00000630925 SAGE1Q9NXZ1 904 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 SMC3Q9UQE7 1217 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 NUP160Q12769 1436 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 TRIM6-TRIM34B2RNG4 842 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 CFAP99D6REC4 459 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 ZBTB7BO15156 539 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-213ENST00000630925 BAIAP3O94812 1187 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 TYRP1P17643 537 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 TNFAIP3P21580 790 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 SSR1P43307 286 aaKnown RBP5.84□□□□□ -1.47
SDCBP-213ENST00000630925 ZNF132P52740 706 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 FKBP5Q13451 457 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-213ENST00000630925 MZT2AQ6P582 158 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 KIAA0825Q8IV33 1275 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 MAGEB6Q8N7X4 407 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 TMC1Q8TDI8 760 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 CHAC2Q8WUX2 184 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 STRBPQ96SI9 672 aaKnown RBP5.84□□□□□ -1.47
SDCBP-213ENST00000630925 CD2APQ9Y5K6 639 aa5.84□□□□□ -1.47
SDCBP-213ENST00000630925 V9GY48 417 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-213ENST00000630925 MED1Q15648 1581 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-213ENST00000630925 ADAMTSL3P82987 1691 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 RASSF10A6NK89 507 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 GOLGA6L6A8MZA4 724 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 RRP9O43818 475 aaKnown RBP5.83□□□□□ -1.48
SDCBP-213ENST00000630925 EVI5O60447 810 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 KATNA1O75449 491 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 FOSL1P15407 271 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 OAS2P29728 719 aaKnown RBP5.83□□□□□ -1.48
SDCBP-213ENST00000630925 DDIT3P35638 169 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 NASPP49321 788 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-213ENST00000630925 PIN1Q13526 163 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-213ENST00000630925 DCTN1Q14203 1278 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 TM4SF20Q53R12 229 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 DNAJC21Q5F1R6 531 aaKnown RBP5.83□□□□□ -1.48
SDCBP-213ENST00000630925 JAKMIP3Q5VZ66 844 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 LMBRD2Q68DH5 695 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-213ENST00000630925 ALG1LQ6GMV1 187 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 LCA5Q86VQ0 697 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 OR8H2Q8N162 312 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 PHTF2Q8N3S3 785 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 TTC13Q8NBP0 860 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 PLPP7Q8NBV4 271 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 NBPF3Q9H094 633 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 CSRNP2Q9H175 543 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 ZSWIM6Q9HCJ5 1215 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-213ENST00000630925 GTF2IRD1Q9UHL9 959 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 USP25Q9UHP3 1055 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 NOB1Q9ULX3 412 aaKnown RBP5.83□□□□□ -1.48
SDCBP-213ENST00000630925 MAFFQ9ULX9 164 aa5.83□□□□□ -1.48
SDCBP-213ENST00000630925 PLAAQ9Y263 795 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms