RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 UNCXA6NJT0 531 aa25.78■■□□□ 1.72
TARDBP-228ENST00000629725 MYO1BO43795 1136 aa25.78■■□□□ 1.72
TARDBP-228ENST00000629725 SUPT20HL1Q3ZLR7 823 aa25.78■■□□□ 1.72
TARDBP-228ENST00000629725 ERO1AQ96HE7 468 aa25.78■■□□□ 1.72
TARDBP-228ENST00000629725 CSF1RP07333 972 aa25.77■■□□□ 1.72
TARDBP-228ENST00000629725 GCKRQ14397 625 aa25.77■■□□□ 1.72
TARDBP-228ENST00000629725 OTUD7BQ6GQQ9 843 aa25.77■■□□□ 1.72
TARDBP-228ENST00000629725 CERS5Q8N5B7 392 aa25.77■■□□□ 1.72
TARDBP-228ENST00000629725 HABP4Q5JVS0 413 aaKnown RBP25.76■■□□□ 1.71
TARDBP-228ENST00000629725 G2E3Q7L622 706 aa25.76■■□□□ 1.71
TARDBP-228ENST00000629725 PTPN22Q9Y2R2 807 aa25.76■■□□□ 1.71
TARDBP-228ENST00000629725 PCDHAC2Q9Y5I4 1007 aa25.76■■□□□ 1.71
TARDBP-228ENST00000629725 KIAA0100Q14667 2235 aaKnown RBP25.76■■□□□ 1.71
TARDBP-228ENST00000629725 CLRN2A0PK11 232 aa25.75■■□□□ 1.71
TARDBP-228ENST00000629725 F8W031 263 aaPredicted RBP25.75■■□□□ 1.71
TARDBP-228ENST00000629725 CFAP100Q494V2 611 aa25.75■■□□□ 1.71
TARDBP-228ENST00000629725 TSR2Q969E8 191 aaKnown RBP25.75■■□□□ 1.71
TARDBP-228ENST00000629725 SNAP23O00161 211 aa25.74■■□□□ 1.71
TARDBP-228ENST00000629725 SLC4A2P04920 1241 aa25.74■■□□□ 1.71
TARDBP-228ENST00000629725 IREB2P48200 963 aaKnown RBP25.74■■□□□ 1.71
TARDBP-228ENST00000629725 CASP7P55210 303 aa25.74■■□□□ 1.71
TARDBP-228ENST00000629725 CRHR2Q13324 411 aa25.74■■□□□ 1.71
TARDBP-228ENST00000629725 CD99L2Q8TCZ2 262 aa25.74■■□□□ 1.71
TARDBP-228ENST00000629725 MYH16Q9H6N6 1097 aa25.74■■□□□ 1.71
TARDBP-228ENST00000629725 VEZTQ9HBM0 779 aa25.74■■□□□ 1.71
TARDBP-228ENST00000629725 IRS2Q9Y4H2 1338 aa25.73■■□□□ 1.71
TARDBP-228ENST00000629725 ANKRD18BA2A2Z9 1011 aa25.73■■□□□ 1.71
TARDBP-228ENST00000629725 SPDYE2BA6NHP3 402 aa25.73■■□□□ 1.71
TARDBP-228ENST00000629725 TAF5LO75529 589 aa25.73■■□□□ 1.71
TARDBP-228ENST00000629725 SPDYE6P0CI01 402 aa25.73■■□□□ 1.71
TARDBP-228ENST00000629725 NBPF12Q5TAG4 269 aaPredicted RBP25.73■■□□□ 1.71
TARDBP-228ENST00000629725 C15orf52Q6ZUT6 534 aaKnown RBP25.73■■□□□ 1.71
TARDBP-228ENST00000629725 PRMT6Q96LA8 375 aaPredicted RBP25.73■■□□□ 1.71
TARDBP-228ENST00000629725 PRKRIP1Q9H875 184 aaPredicted RBP25.73■■□□□ 1.71
TARDBP-228ENST00000629725 A0A1B0GUL6 1792 aa25.73■■□□□ 1.71
TARDBP-228ENST00000629725 TWISTNBQ3B726 338 aaPredicted RBP25.72■■□□□ 1.71
TARDBP-228ENST00000629725 ANKRD13AQ8IZ07 590 aa25.72■■□□□ 1.71
TARDBP-228ENST00000629725 EFCC1Q9HA90 598 aa25.72■■□□□ 1.71
TARDBP-228ENST00000629725 USP2O75604 605 aaPredicted RBP25.71■■□□□ 1.71
TARDBP-228ENST00000629725 IL1R1P14778 569 aa25.71■■□□□ 1.71
TARDBP-228ENST00000629725 GJA5P36382 358 aa25.71■■□□□ 1.71
TARDBP-228ENST00000629725 FKBP1AP62942 108 aaKnown RBP25.71■■□□□ 1.71
TARDBP-228ENST00000629725 SP3Q02447 781 aa25.71■■□□□ 1.71
TARDBP-228ENST00000629725 ZNF804AQ7Z570 1209 aa25.71■■□□□ 1.71
TARDBP-228ENST00000629725 HELBQ8NG08 1087 aaPredicted RBP25.71■■□□□ 1.71
TARDBP-228ENST00000629725 ARMC5Q96C12 935 aa25.71■■□□□ 1.71
TARDBP-228ENST00000629725 RBM5P52756 815 aaKnown RBP eCLIP25.7■■□□□ 1.7
TARDBP-228ENST00000629725 PTPN18Q99952 460 aa25.7■■□□□ 1.7
TARDBP-228ENST00000629725 OTOFQ9HC10 1997 aa25.69■■□□□ 1.7
TARDBP-228ENST00000629725 FLIIQ13045 1269 aa25.69■■□□□ 1.7
TARDBP-228ENST00000629725 RASA3Q14644 834 aa25.69■■□□□ 1.7
TARDBP-228ENST00000629725 LINS1Q8NG48 757 aa25.69■■□□□ 1.7
TARDBP-228ENST00000629725 CACNA1FO60840 1977 aa25.68■■□□□ 1.7
TARDBP-228ENST00000629725 TESPA1A2RU30 521 aaPredicted RBP25.68■■□□□ 1.7
TARDBP-228ENST00000629725 EN2P19622 333 aaPredicted RBP25.68■■□□□ 1.7
TARDBP-228ENST00000629725 IFIT5Q13325 482 aaKnown RBP25.68■■□□□ 1.7
TARDBP-228ENST00000629725 FKBP5Q13451 457 aaPredicted RBP25.68■■□□□ 1.7
TARDBP-228ENST00000629725 DNAAF4Q8WXU2 420 aa25.68■■□□□ 1.7
TARDBP-228ENST00000629725 JAG2Q9Y219 1238 aa25.68■■□□□ 1.7
TARDBP-228ENST00000629725 AOX1Q06278 1338 aa25.67■■□□□ 1.7
TARDBP-228ENST00000629725 TNFAIP1Q13829 316 aa25.66■■□□□ 1.7
TARDBP-228ENST00000629725 OPTNQ96CV9 577 aa25.66■■□□□ 1.7
TARDBP-228ENST00000629725 ELP3Q9H9T3 547 aa25.66■■□□□ 1.7
TARDBP-228ENST00000629725 CHMP3Q9Y3E7 222 aa25.66■■□□□ 1.7
TARDBP-228ENST00000629725 CAP1Q01518 475 aa25.65■■□□□ 1.7
TARDBP-228ENST00000629725 TMEM106CQ9BVX2 250 aa25.65■■□□□ 1.7
TARDBP-228ENST00000629725 FOXO4P98177 505 aa25.64■■□□□ 1.7
TARDBP-228ENST00000629725 MS4A4AQ96JQ5 239 aa25.63■■□□□ 1.69
TARDBP-228ENST00000629725 ARHGEF6Q15052 776 aa25.62■■□□□ 1.69
TARDBP-228ENST00000629725 CCDC27Q2M243 656 aa25.62■■□□□ 1.69
TARDBP-228ENST00000629725 SPDYE2Q495Y8 402 aa25.62■■□□□ 1.69
TARDBP-228ENST00000629725 NBPF11Q86T75 865 aa25.62■■□□□ 1.69
TARDBP-228ENST00000629725 ZNF333Q96JL9 665 aa25.62■■□□□ 1.69
TARDBP-228ENST00000629725 ZNF70Q9UC06 446 aaPredicted RBP25.62■■□□□ 1.69
TARDBP-228ENST00000629725 SZT2Q5T011 3432 aa25.62■■□□□ 1.69
TARDBP-228ENST00000629725 PLIN1O60240 522 aa25.61■■□□□ 1.69
TARDBP-228ENST00000629725 SLC9C1Q4G0N8 1177 aa25.61■■□□□ 1.69
TARDBP-228ENST00000629725 WWC1Q8IX03 1113 aa25.61■■□□□ 1.69
TARDBP-228ENST00000629725 SERPINA10Q9UK55 444 aa25.61■■□□□ 1.69
TARDBP-228ENST00000629725 FXR1P51114 621 aaKnown RBP eCLIP25.6■■□□□ 1.69
TARDBP-228ENST00000629725 CCDC57Q2TAC2 916 aa25.6■■□□□ 1.69
TARDBP-228ENST00000629725 TAF7LQ5H9L4 462 aa25.6■■□□□ 1.69
TARDBP-228ENST00000629725 MFSD14BQ5SR56 506 aa25.6■■□□□ 1.69
TARDBP-228ENST00000629725 LDHAL6AQ6ZMR3 332 aa25.6■■□□□ 1.69
TARDBP-228ENST00000629725 TDRD3Q9H7E2 651 aaKnown RBP25.6■■□□□ 1.69
TARDBP-228ENST00000629725 ZFYVE28Q9HCC9 887 aa25.6■■□□□ 1.69
TARDBP-228ENST00000629725 TTF2Q9UNY4 1162 aaKnown RBP25.6■■□□□ 1.69
TARDBP-228ENST00000629725 FAM205AQ6ZU69 1335 aa25.6■■□□□ 1.69
TARDBP-228ENST00000629725 GTF2A2P52657 109 aa25.59■■□□□ 1.69
TARDBP-228ENST00000629725 TAF1CQ15572 869 aaPredicted RBP25.59■■□□□ 1.69
TARDBP-228ENST00000629725 LMBR1LQ6UX01 489 aa25.59■■□□□ 1.69
TARDBP-228ENST00000629725 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.59■■□□□ 1.69
TARDBP-228ENST00000629725 BRI3BPQ8WY22 251 aa25.59■■□□□ 1.69
TARDBP-228ENST00000629725 ZNF594Q96JF6 807 aaPredicted RBP25.59■■□□□ 1.69
TARDBP-228ENST00000629725 TEPSINQ96N21 525 aa25.59■■□□□ 1.69
TARDBP-228ENST00000629725 CNNM1Q9NRU3 951 aa25.59■■□□□ 1.69
TARDBP-228ENST00000629725 ARAP2Q8WZ64 1704 aa25.58■■□□□ 1.69
TARDBP-228ENST00000629725 CCL15-CCL14A0A0B4J2E2 113 aa25.58■■□□□ 1.69
TARDBP-228ENST00000629725 CCL15Q16663 113 aa25.58■■□□□ 1.69
TARDBP-228ENST00000629725 CNKSR2Q8WXI2 1034 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms