RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 ITPRIPQ8IWB1 547 aa13.87□□□□□ -0.19
DDX41-219ENST00000629036 FTSJ3Q8IY81 847 aaKnown RBP13.87□□□□□ -0.19
DDX41-219ENST00000629036 C1orf115Q9H7X2 142 aa13.87□□□□□ -0.19
DDX41-219ENST00000629036 CNOT7Q9UIV1 285 aaKnown RBP13.87□□□□□ -0.19
DDX41-219ENST00000629036 SRGAP3O43295 1099 aa13.86□□□□□ -0.19
DDX41-219ENST00000629036 LMOD1P29536 600 aaPredicted RBP13.86□□□□□ -0.19
DDX41-219ENST00000629036 GYG1P46976 350 aa13.86□□□□□ -0.19
DDX41-219ENST00000629036 KCNJ4P48050 445 aa13.86□□□□□ -0.19
DDX41-219ENST00000629036 MVPQ14764 893 aaKnown RBP13.86□□□□□ -0.19
DDX41-219ENST00000629036 SAMD7Q7Z3H4 446 aa13.86□□□□□ -0.19
DDX41-219ENST00000629036 CNTROBQ8N137 903 aa13.86□□□□□ -0.19
DDX41-219ENST00000629036 AGBL3Q8NEM8 1001 aa13.86□□□□□ -0.19
DDX41-219ENST00000629036 TDRD7Q8NHU6 1098 aaKnown RBP13.86□□□□□ -0.19
DDX41-219ENST00000629036 SSH3Q8TE77 659 aa13.86□□□□□ -0.19
DDX41-219ENST00000629036 SIL1Q9H173 461 aa13.86□□□□□ -0.19
DDX41-219ENST00000629036 FAM205AQ6ZU69 1335 aa13.86□□□□□ -0.19
DDX41-219ENST00000629036 PUM3Q15397 648 aaKnown RBP13.85□□□□□ -0.19
DDX41-219ENST00000629036 ZBED3Q96IU2 234 aaPredicted RBP13.85□□□□□ -0.19
DDX41-219ENST00000629036 HDAC5Q9UQL6 1122 aa13.85□□□□□ -0.19
DDX41-219ENST00000629036 PAPPA2Q9BXP8 1791 aa13.85□□□□□ -0.19
DDX41-219ENST00000629036 ASTN2O75129 1339 aaPredicted RBP13.85□□□□□ -0.19
DDX41-219ENST00000629036 IL15P40933 162 aaPredicted RBP13.84□□□□□ -0.19
DDX41-219ENST00000629036 FMR1Q06787 632 aaKnown RBP eCLIP13.84□□□□□ -0.19
DDX41-219ENST00000629036 PDE3AQ14432 1141 aa13.84□□□□□ -0.19
DDX41-219ENST00000629036 CYP4F22Q6NT55 531 aa13.84□□□□□ -0.19
DDX41-219ENST00000629036 CEP85Q6P2H3 762 aa13.84□□□□□ -0.19
DDX41-219ENST00000629036 ZNF804AQ7Z570 1209 aa13.84□□□□□ -0.19
DDX41-219ENST00000629036 CAPNS2Q96L46 248 aa13.84□□□□□ -0.19
DDX41-219ENST00000629036 YTHDC1Q96MU7 727 aaKnown RBP13.84□□□□□ -0.19
DDX41-219ENST00000629036 MCOLN1Q9GZU1 580 aa13.84□□□□□ -0.19
DDX41-219ENST00000629036 ZBTB40Q9NUA8 1239 aa13.84□□□□□ -0.19
DDX41-219ENST00000629036 COG6Q9Y2V7 657 aa13.84□□□□□ -0.19
DDX41-219ENST00000629036 MYH2Q9UKX2 1941 aa13.84□□□□□ -0.19
DDX41-219ENST00000629036 MAST2Q6P0Q8 1798 aa13.83□□□□□ -0.19
DDX41-219ENST00000629036 DOCK2Q92608 1830 aa13.83□□□□□ -0.2
DDX41-219ENST00000629036 ZBTB22O15209 634 aa13.83□□□□□ -0.2
DDX41-219ENST00000629036 FKBP1AP62942 108 aaKnown RBP13.83□□□□□ -0.2
DDX41-219ENST00000629036 GTF2IP78347 998 aa13.83□□□□□ -0.2
DDX41-219ENST00000629036 ATP8B2P98198 1209 aa13.83□□□□□ -0.2
DDX41-219ENST00000629036 TBC1D10BQ4KMP7 808 aaPredicted RBP13.83□□□□□ -0.2
DDX41-219ENST00000629036 TTLL5Q6EMB2 1281 aa13.83□□□□□ -0.2
DDX41-219ENST00000629036 SIRT2Q8IXJ6 389 aa13.83□□□□□ -0.2
DDX41-219ENST00000629036 MYO3BQ8WXR4 1341 aa13.83□□□□□ -0.2
DDX41-219ENST00000629036 CDK5RAP2Q96SN8 1893 aa13.82□□□□□ -0.2
DDX41-219ENST00000629036 LAMB1P07942 1786 aa13.82□□□□□ -0.2
DDX41-219ENST00000629036 G3V3G9 751 aa13.82□□□□□ -0.2
DDX41-219ENST00000629036 SASH1O94885 1247 aa13.82□□□□□ -0.2
DDX41-219ENST00000629036 HIBADHP31937 336 aaKnown RBP13.82□□□□□ -0.2
DDX41-219ENST00000629036 BCAMP50895 628 aa13.82□□□□□ -0.2
DDX41-219ENST00000629036 GRIK5Q16478 980 aa13.82□□□□□ -0.2
DDX41-219ENST00000629036 KIF4BQ2VIQ3 1234 aa13.82□□□□□ -0.2
DDX41-219ENST00000629036 DCAF8Q5TAQ9 597 aa13.82□□□□□ -0.2
DDX41-219ENST00000629036 ZC3H15Q8WU90 426 aaKnown RBP13.82□□□□□ -0.2
DDX41-219ENST00000629036 LPIN2Q92539 896 aa13.82□□□□□ -0.2
DDX41-219ENST00000629036 NOP58Q9Y2X3 529 aaKnown RBP13.82□□□□□ -0.2
DDX41-219ENST00000629036 AOX1Q06278 1338 aa13.82□□□□□ -0.2
DDX41-219ENST00000629036 OTOFQ9HC10 1997 aa13.82□□□□□ -0.2
DDX41-219ENST00000629036 TRAF5O00463 557 aa13.81□□□□□ -0.2
DDX41-219ENST00000629036 AOC2O75106 756 aa13.81□□□□□ -0.2
DDX41-219ENST00000629036 USP17L8P0C7I0 530 aa13.81□□□□□ -0.2
DDX41-219ENST00000629036 ADORA1P30542 326 aa13.81□□□□□ -0.2
DDX41-219ENST00000629036 TFCP2Q12800 502 aa13.81□□□□□ -0.2
DDX41-219ENST00000629036 ATP2B3Q16720 1220 aa13.81□□□□□ -0.2
DDX41-219ENST00000629036 MYOZ2Q9NPC6 264 aa13.81□□□□□ -0.2
DDX41-219ENST00000629036 JAG2Q9Y219 1238 aa13.81□□□□□ -0.2
DDX41-219ENST00000629036 H7C1D1 291 aa13.8□□□□□ -0.2
DDX41-219ENST00000629036 MS4A1P11836 297 aa13.8□□□□□ -0.2
DDX41-219ENST00000629036 ECE1P42892 770 aa13.8□□□□□ -0.2
DDX41-219ENST00000629036 DGKZQ13574 1117 aa13.8□□□□□ -0.2
DDX41-219ENST00000629036 DLK2Q6UY11 383 aa13.8□□□□□ -0.2
DDX41-219ENST00000629036 GLIS2Q9BZE0 524 aaPredicted RBP13.8□□□□□ -0.2
DDX41-219ENST00000629036 DDX19BQ9UMR2 479 aa13.8□□□□□ -0.2
DDX41-219ENST00000629036 PCDHAC2Q9Y5I4 1007 aa13.8□□□□□ -0.2
DDX41-219ENST00000629036 SLC5A1P13866 664 aa13.79□□□□□ -0.2
DDX41-219ENST00000629036 PHKA1P46020 1223 aa13.79□□□□□ -0.2
DDX41-219ENST00000629036 RRP1P56182 461 aaKnown RBP13.79□□□□□ -0.2
DDX41-219ENST00000629036 KIAA0825Q8IV33 1275 aa13.79□□□□□ -0.2
DDX41-219ENST00000629036 CEP126Q9P2H0 1117 aa13.79□□□□□ -0.2
DDX41-219ENST00000629036 IQSEC3Q9UPP2 1182 aaPredicted RBP13.79□□□□□ -0.2
DDX41-219ENST00000629036 FOCADQ5VW36 1801 aa13.78□□□□□ -0.2
DDX41-219ENST00000629036 A0A1B0GUL7 405 aa13.78□□□□□ -0.2
DDX41-219ENST00000629036 WNT10BO00744 389 aa13.78□□□□□ -0.2
DDX41-219ENST00000629036 IFIT1P09914 478 aaKnown RBP13.78□□□□□ -0.2
DDX41-219ENST00000629036 NBPF9Q3BBW0 867 aa13.78□□□□□ -0.2
DDX41-219ENST00000629036 CST9Q5W186 159 aa13.78□□□□□ -0.2
DDX41-219ENST00000629036 MTMR14Q8NCE2 650 aa13.78□□□□□ -0.2
DDX41-219ENST00000629036 FBXW7Q969H0 707 aa13.78□□□□□ -0.2
DDX41-219ENST00000629036 GGA3Q9NZ52 723 aa13.78□□□□□ -0.2
DDX41-219ENST00000629036 PITPNM2Q9BZ72 1349 aa13.78□□□□□ -0.2
DDX41-219ENST00000629036 SSC5DA1L4H1 1573 aa13.78□□□□□ -0.2
DDX41-219ENST00000629036 ADM5C9JUS6 153 aa13.77□□□□□ -0.21
DDX41-219ENST00000629036 MMP14P50281 582 aa13.77□□□□□ -0.21
DDX41-219ENST00000629036 TIMM10P62072 90 aa13.77□□□□□ -0.21
DDX41-219ENST00000629036 MFSD14BQ5SR56 506 aa13.77□□□□□ -0.21
DDX41-219ENST00000629036 MYH7P12883 1935 aa13.76□□□□□ -0.21
DDX41-219ENST00000629036 PDS5AQ29RF7 1337 aaKnown RBP13.76□□□□□ -0.21
DDX41-219ENST00000629036 SOX10P56693 466 aa13.76□□□□□ -0.21
DDX41-219ENST00000629036 RASGRF1Q13972 1273 aa13.76□□□□□ -0.21
DDX41-219ENST00000629036 SCARF1Q14162 830 aa13.76□□□□□ -0.21
DDX41-219ENST00000629036 CAVIN4Q5BKX8 364 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms