RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 PXYLP1Q8TE99 480 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 NECTIN2Q92692 538 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 FSD1Q9BTV5 496 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 UPF3BQ9BZI7 483 aaKnown RBP4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 TLR9Q9NR96 1032 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 MSRAQ9UJ68 235 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 SCAF8Q9UPN6 1271 aaKnown RBP4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 ZBTB1Q9Y2K1 713 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 KDM2AQ9Y2K7 1162 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 KTN1Q86UP2 1357 aaKnown RBP4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 SBNO2Q9Y2G9 1366 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 COL4A5P29400 1685 aa4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 CCL15-CCL14A0A0B4J2E2 113 aa4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 UNCXA6NJT0 531 aa4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 MAP3K13O43283 966 aa4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 KDM4AO75164 1064 aa4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 ELNP15502 786 aa4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 ITGAEP38570 1179 aa4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 GTF2A2P52657 109 aa4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 CCL15Q16663 113 aa4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 MCTP2Q6DN12 878 aa4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 DPP8Q6V1X1 898 aaPredicted RBP4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 SPATA18Q8TC71 538 aa4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 BADQ92934 168 aa4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 RBM17Q96I25 401 aaKnown RBP4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 HMX1Q9NP08 348 aaPredicted RBP4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 PRDM5Q9NQX1 630 aaPredicted RBP4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 TBC1D2BQ9UPU7 963 aa4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 CFAP47Q6ZTR5 3102 aa4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 NRXN2Q9P2S2 1712 aa4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 AFDNP55196 1824 aaKnown RBP4.35□□□□□ -1.71
SCARNA4.1-201ENST00000628597 MYO9BQ13459 2157 aa4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 EIF4E1BA6NMX2 242 aaKnown RBP4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 YDJCA8MPS7 323 aa4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 CYP19A1P11511 503 aaPredicted RBP4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 SDHBP21912 280 aa4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 EVX2Q03828 476 aa4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 LRRC41Q15345 812 aa4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 BMP8AQ7Z5Y6 402 aa4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 SP8Q8IXZ3 490 aa4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 KIAA2013Q8IYS2 634 aa4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 KCNG4Q8TDN1 519 aa4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 CLMNQ96JQ2 1002 aa4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 SLC28A3Q9HAS3 691 aa4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 DLL3Q9NYJ7 618 aa4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 CPA4Q9UI42 421 aa4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 KCNH4Q9UQ05 1017 aa4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 PFASO15067 1338 aa4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 ZNF646O15015 1829 aaPredicted RBP4.34□□□□□ -1.71
SCARNA4.1-201ENST00000628597 SPTBN2O15020 2390 aa4.34□□□□□ -1.72
SCARNA4.1-201ENST00000628597 GVINP1Q7Z2Y8 2422 aa4.34□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ASH1LQ9NR48 2969 aaKnown RBP4.34□□□□□ -1.72
SCARNA4.1-201ENST00000628597 KDM3BQ7LBC6 1761 aa4.33□□□□□ -1.72
SCARNA4.1-201ENST00000628597 RIC1Q4ADV7 1423 aa4.33□□□□□ -1.72
SCARNA4.1-201ENST00000628597 FAM177BA6PVY3 158 aa4.33□□□□□ -1.72
SCARNA4.1-201ENST00000628597 STARD3NLO95772 234 aa4.33□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ADRB1P08588 477 aa4.33□□□□□ -1.72
SCARNA4.1-201ENST00000628597 NBL1P41271 181 aa4.33□□□□□ -1.72
SCARNA4.1-201ENST00000628597 IREB2P48200 963 aaKnown RBP4.33□□□□□ -1.72
SCARNA4.1-201ENST00000628597 FLT3LGP49771 235 aa4.33□□□□□ -1.72
SCARNA4.1-201ENST00000628597 RAB30Q15771 203 aa4.33□□□□□ -1.72
SCARNA4.1-201ENST00000628597 LRSAM1Q6UWE0 723 aa4.33□□□□□ -1.72
SCARNA4.1-201ENST00000628597 TMC4Q7Z404 712 aa4.33□□□□□ -1.72
SCARNA4.1-201ENST00000628597 FAM43AQ8N2R8 423 aa4.33□□□□□ -1.72
SCARNA4.1-201ENST00000628597 BRI3BPQ8WY22 251 aa4.33□□□□□ -1.72
SCARNA4.1-201ENST00000628597 OGDHLQ9ULD0 1010 aa4.33□□□□□ -1.72
SCARNA4.1-201ENST00000628597 LTN1O94822 1766 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 LAMB2P55268 1798 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ZFYVE26Q68DK2 2539 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 G3V3G9 751 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 CTGFP29279 349 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 NUBP1P53384 320 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ATN1P54259 1190 aaPredicted RBP4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 EPHA10Q5JZY3 1008 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 DCAF8Q5TAQ9 597 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 C17orf99Q6UX52 265 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ANKRD13AQ8IZ07 590 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 FBXL6Q8N531 539 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 HINFPQ9BQA5 517 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 RTFDC1Q9BY42 306 aaPredicted RBP4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 PBX4Q9BYU1 374 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 SENP6Q9GZR1 1112 aaPredicted RBP4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ZCCHC17Q9NP64 241 aaKnown RBP4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 MYOZ2Q9NPC6 264 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 GABRQQ9UN88 632 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ZNF652Q9Y2D9 606 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 GCN1Q92616 2671 aaKnown RBP4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 USP24Q9UPU5 2620 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 TJP1Q07157 1748 aa4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 CNOT1A5YKK6 2376 aaKnown RBP4.32□□□□□ -1.72
SCARNA4.1-201ENST00000628597 SNED1Q8TER0 1413 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 MYH14Q7Z406 1995 aaKnown RBP4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 CACNA1SQ13698 1873 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 TMEM221A6NGB7 291 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 M0R296 226 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 USP17L8P0C7I0 530 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 COL6A1P12109 1028 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 GJA5P36382 358 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 PBX2P40425 430 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms