RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 C19orf57Q0VDD7 668 aa6.89□□□□□ -1.31
VBP1-204ENST00000625964 FKBP5Q13451 457 aaPredicted RBP6.89□□□□□ -1.31
VBP1-204ENST00000625964 YIPF2Q9BWQ6 316 aa6.89□□□□□ -1.31
VBP1-204ENST00000625964 PAPLNO95428 1278 aa6.88□□□□□ -1.31
VBP1-204ENST00000625964 USP11P51784 963 aa6.88□□□□□ -1.31
VBP1-204ENST00000625964 ZAR1Q86SH2 424 aa6.88□□□□□ -1.31
VBP1-204ENST00000625964 C14orf37Q86TY3 774 aa6.88□□□□□ -1.31
VBP1-204ENST00000625964 ZAP70P43403 619 aa6.87□□□□□ -1.31
VBP1-204ENST00000625964 KRTAP19-4Q3LI73 84 aa6.87□□□□□ -1.31
VBP1-204ENST00000625964 ZNF648Q5T619 568 aaPredicted RBP6.87□□□□□ -1.31
VBP1-204ENST00000625964 PDE12Q6L8Q7 609 aaKnown RBP6.87□□□□□ -1.31
VBP1-204ENST00000625964 SPOCD1Q6ZMY3 1216 aa6.87□□□□□ -1.31
VBP1-204ENST00000625964 SLC7A3Q8WY07 619 aa6.87□□□□□ -1.31
VBP1-204ENST00000625964 TBC1D32Q96NH3 1257 aa6.87□□□□□ -1.31
VBP1-204ENST00000625964 EIF4EBP3O60516 100 aaPredicted RBP6.86□□□□□ -1.31
VBP1-204ENST00000625964 FARP2O94887 1054 aaPredicted RBP6.86□□□□□ -1.31
VBP1-204ENST00000625964 CYP2E1P05181 493 aaPredicted RBP6.86□□□□□ -1.31
VBP1-204ENST00000625964 PKN1Q16512 942 aa6.86□□□□□ -1.31
VBP1-204ENST00000625964 SWI5Q1ZZU3 235 aa6.86□□□□□ -1.31
VBP1-204ENST00000625964 DUSP27Q5VZP5 1158 aa6.86□□□□□ -1.31
VBP1-204ENST00000625964 EZH1Q92800 747 aaPredicted RBP6.86□□□□□ -1.31
VBP1-204ENST00000625964 PRKAG2Q9UGJ0 569 aa6.86□□□□□ -1.31
VBP1-204ENST00000625964 SOX13Q9UN79 622 aa6.86□□□□□ -1.31
VBP1-204ENST00000625964 LMOD1P29536 600 aaPredicted RBP6.86□□□□□ -1.31
VBP1-204ENST00000625964 CYP27A1Q02318 531 aa6.86□□□□□ -1.31
VBP1-204ENST00000625964 SAP130Q9H0E3 1048 aa6.86□□□□□ -1.31
VBP1-204ENST00000625964 SALL4Q9UJQ4 1053 aa6.86□□□□□ -1.31
VBP1-204ENST00000625964 ZNF777Q9ULD5 760 aaPredicted RBP6.86□□□□□ -1.31
VBP1-204ENST00000625964 NFKBIEO00221 500 aa6.85□□□□□ -1.31
VBP1-204ENST00000625964 PDE2AO00408 941 aaPredicted RBP6.85□□□□□ -1.31
VBP1-204ENST00000625964 EXOSC6Q5RKV6 272 aaKnown RBP6.85□□□□□ -1.31
VBP1-204ENST00000625964 SHISA5Q8N114 240 aa6.85□□□□□ -1.31
VBP1-204ENST00000625964 FBLIM1Q8WUP2 373 aa6.85□□□□□ -1.31
VBP1-204ENST00000625964 CALR3Q96L12 384 aaKnown RBP6.85□□□□□ -1.31
VBP1-204ENST00000625964 TNFRSF10BO14763 440 aa6.84□□□□□ -1.31
VBP1-204ENST00000625964 RPLP1P05386 114 aaKnown RBP6.84□□□□□ -1.31
VBP1-204ENST00000625964 ADMP35318 185 aa6.84□□□□□ -1.31
VBP1-204ENST00000625964 FAM26DQ5JW98 314 aa6.84□□□□□ -1.31
VBP1-204ENST00000625964 CDPF1Q6NVV7 123 aa6.84□□□□□ -1.31
VBP1-204ENST00000625964 STK11IPQ8N1F8 1099 aa6.84□□□□□ -1.31
VBP1-204ENST00000625964 GPR152Q8TDT2 470 aa6.84□□□□□ -1.31
VBP1-204ENST00000625964 SOX17Q9H6I2 414 aaPredicted RBP6.84□□□□□ -1.31
VBP1-204ENST00000625964 ELP3Q9H9T3 547 aa6.84□□□□□ -1.31
VBP1-204ENST00000625964 DZANK1Q9NVP4 752 aa6.84□□□□□ -1.31
VBP1-204ENST00000625964 ZNF124Q15973 351 aa6.83□□□□□ -1.32
VBP1-204ENST00000625964 ABTB2Q8N961 1025 aa6.83□□□□□ -1.32
VBP1-204ENST00000625964 ZC3H7BQ9UGR2 993 aaKnown RBP6.83□□□□□ -1.32
VBP1-204ENST00000625964 SLC5A6Q9Y289 635 aa6.83□□□□□ -1.32
VBP1-204ENST00000625964 IKBKEQ14164 716 aa6.82□□□□□ -1.32
VBP1-204ENST00000625964 TMEM102Q8N9M5 508 aaPredicted RBP6.82□□□□□ -1.32
VBP1-204ENST00000625964 C2CD4AQ8NCU7 369 aaPredicted RBP6.82□□□□□ -1.32
VBP1-204ENST00000625964 GATA6Q92908 595 aa6.82□□□□□ -1.32
VBP1-204ENST00000625964 PMEPA1Q969W9 287 aa6.82□□□□□ -1.32
VBP1-204ENST00000625964 PRIMPOLQ96LW4 560 aa6.82□□□□□ -1.32
VBP1-204ENST00000625964 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.82□□□□□ -1.32
VBP1-204ENST00000625964 CARMIL2Q6F5E8 1435 aa6.81□□□□□ -1.32
VBP1-204ENST00000625964 ACIN1Q9UKV3 1341 aaKnown RBP6.81□□□□□ -1.32
VBP1-204ENST00000625964 LOC100289279A0A1B0GTE1 492 aa6.81□□□□□ -1.32
VBP1-204ENST00000625964 SOX1O00570 391 aaPredicted RBP6.81□□□□□ -1.32
VBP1-204ENST00000625964 SOX4Q06945 474 aaPredicted RBP6.81□□□□□ -1.32
VBP1-204ENST00000625964 MAP7Q14244 749 aa6.81□□□□□ -1.32
VBP1-204ENST00000625964 XKR5Q6UX68 686 aa6.81□□□□□ -1.32
VBP1-204ENST00000625964 ATG4DQ86TL0 474 aaPredicted RBP6.81□□□□□ -1.32
VBP1-204ENST00000625964 KSR1Q8IVT5 923 aa6.81□□□□□ -1.32
VBP1-204ENST00000625964 BSNDQ8WZ55 320 aa6.81□□□□□ -1.32
VBP1-204ENST00000625964 USP26Q9BXU7 913 aa6.81□□□□□ -1.32
VBP1-204ENST00000625964 STIM2Q9P246 746 aa6.81□□□□□ -1.32
VBP1-204ENST00000625964 FAM170BA6NMN3 283 aa6.81□□□□□ -1.32
VBP1-204ENST00000625964 PLCL1Q15111 1095 aa6.81□□□□□ -1.32
VBP1-204ENST00000625964 ZNF438Q7Z4V0 828 aa6.81□□□□□ -1.32
VBP1-204ENST00000625964 BCL7CQ8WUZ0 217 aaPredicted RBP6.81□□□□□ -1.32
VBP1-204ENST00000625964 TMEM40Q8WWA1 233 aa6.81□□□□□ -1.32
VBP1-204ENST00000625964 MISP3Q96FF7 219 aa6.81□□□□□ -1.32
VBP1-204ENST00000625964 SLC38A3Q99624 504 aa6.81□□□□□ -1.32
VBP1-204ENST00000625964 TMEM63CQ9P1W3 806 aa6.81□□□□□ -1.32
VBP1-204ENST00000625964 KANSL3Q9P2N6 904 aa6.81□□□□□ -1.32
VBP1-204ENST00000625964 CES1P23141 567 aa6.8□□□□□ -1.32
VBP1-204ENST00000625964 OCLNQ16625 522 aa6.8□□□□□ -1.32
VBP1-204ENST00000625964 ZNF792Q3KQV3 632 aa6.8□□□□□ -1.32
VBP1-204ENST00000625964 HGSNATQ68CP4 663 aa6.8□□□□□ -1.32
VBP1-204ENST00000625964 BHLHE22Q8NFJ8 381 aaPredicted RBP6.8□□□□□ -1.32
VBP1-204ENST00000625964 CNTN3Q9P232 1028 aa6.8□□□□□ -1.32
VBP1-204ENST00000625964 DRD2P14416 443 aa6.79□□□□□ -1.32
VBP1-204ENST00000625964 LRRC4CQ9HCJ2 640 aa6.79□□□□□ -1.32
VBP1-204ENST00000625964 NOVA2Q9UNW9 492 aaKnown RBP6.79□□□□□ -1.32
VBP1-204ENST00000625964 PRMT3O60678 531 aa6.78□□□□□ -1.32
VBP1-204ENST00000625964 RFX1P22670 979 aa6.78□□□□□ -1.32
VBP1-204ENST00000625964 CCER1Q8TC90 406 aaPredicted RBP6.78□□□□□ -1.32
VBP1-204ENST00000625964 NXPE3Q969Y0 559 aa6.78□□□□□ -1.32
VBP1-204ENST00000625964 ARID3CA6NKF2 412 aa6.77□□□□□ -1.33
VBP1-204ENST00000625964 ERICH6Q7L0X2 663 aa6.77□□□□□ -1.33
VBP1-204ENST00000625964 VN1R5Q7Z5H4 357 aa6.77□□□□□ -1.33
VBP1-204ENST00000625964 FAM168AQ92567 244 aa6.77□□□□□ -1.33
VBP1-204ENST00000625964 DLGAP3O95886 979 aa6.76□□□□□ -1.33
VBP1-204ENST00000625964 ACPPP15309 386 aa6.76□□□□□ -1.33
VBP1-204ENST00000625964 HP1BP3Q5SSJ5 553 aaPredicted RBP6.76□□□□□ -1.33
VBP1-204ENST00000625964 ZNF765Q7L2R6 523 aa6.76□□□□□ -1.33
VBP1-204ENST00000625964 C1orf127Q8N9H9 656 aa6.76□□□□□ -1.33
VBP1-204ENST00000625964 NUDT16Q96DE0 195 aaKnown RBP6.76□□□□□ -1.33
VBP1-204ENST00000625964 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 562.2 ms