RNA–Protein interactions for RNA: ENST00000624846.3

CU638689.4-204, humanhuman

TSL 1 (best)

Gene CU638689.4, Length 934 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CU638689.4-204ENST00000624846 LYPD8Q6UX82 237 aa8.33□□□□□ -1.08
CU638689.4-204ENST00000624846 SMIM5Q71RC9 77 aa8.33□□□□□ -1.08
CU638689.4-204ENST00000624846 BPHLQ86WA6 291 aaPredicted RBP8.33□□□□□ -1.08
CU638689.4-204ENST00000624846 AMIGO3Q86WK7 504 aa8.33□□□□□ -1.08
CU638689.4-204ENST00000624846 CCDC116Q8IYX3 515 aa8.33□□□□□ -1.08
CU638689.4-204ENST00000624846 PLEKHF1Q96S99 279 aa8.33□□□□□ -1.08
CU638689.4-204ENST00000624846 CUEDC1Q9NWM3 386 aaPredicted RBP8.33□□□□□ -1.08
CU638689.4-204ENST00000624846 NARFQ9UHQ1 456 aa8.33□□□□□ -1.08
CU638689.4-204ENST00000624846 MAP4K5Q9Y4K4 846 aa8.33□□□□□ -1.08
CU638689.4-204ENST00000624846 SOS1Q07889 1333 aaPredicted RBP8.32□□□□□ -1.08
CU638689.4-204ENST00000624846 USP42Q9H9J4 1324 aaKnown RBP8.32□□□□□ -1.08
CU638689.4-204ENST00000624846 IL6STP40189 918 aaPredicted RBP8.32□□□□□ -1.08
CU638689.4-204ENST00000624846 RIPK4P57078 832 aa8.32□□□□□ -1.08
CU638689.4-204ENST00000624846 MAP2K5Q13163 448 aa8.32□□□□□ -1.08
CU638689.4-204ENST00000624846 C1QTNF2Q9BXJ5 285 aa8.32□□□□□ -1.08
CU638689.4-204ENST00000624846 MBIPQ9NS73 344 aa8.32□□□□□ -1.08
CU638689.4-204ENST00000624846 BABAM1Q9NWV8 329 aa8.32□□□□□ -1.08
CU638689.4-204ENST00000624846 MAP10Q9P2G4 905 aa8.32□□□□□ -1.08
CU638689.4-204ENST00000624846 ZBTB1Q9Y2K1 713 aa8.32□□□□□ -1.08
CU638689.4-204ENST00000624846 ZNF330Q9Y3S2 320 aaPredicted RBP8.32□□□□□ -1.08
CU638689.4-204ENST00000624846 COL15A1P39059 1388 aa8.32□□□□□ -1.08
CU638689.4-204ENST00000624846 UBR3Q6ZT12 1888 aa8.32□□□□□ -1.08
CU638689.4-204ENST00000624846 ADAMTS7Q9UKP4 1686 aa8.31□□□□□ -1.08
CU638689.4-204ENST00000624846 ANP32CO43423 234 aa8.31□□□□□ -1.08
CU638689.4-204ENST00000624846 F12P00748 615 aaPredicted RBP8.31□□□□□ -1.08
CU638689.4-204ENST00000624846 EIF5P55010 431 aaKnown RBP8.31□□□□□ -1.08
CU638689.4-204ENST00000624846 DCTN1Q14203 1278 aa8.31□□□□□ -1.08
CU638689.4-204ENST00000624846 USPL1Q5W0Q7 1092 aa8.31□□□□□ -1.08
CU638689.4-204ENST00000624846 NLGN2Q8NFZ4 835 aa8.31□□□□□ -1.08
CU638689.4-204ENST00000624846 RUNDC1Q96C34 613 aa8.31□□□□□ -1.08
CU638689.4-204ENST00000624846 TUBGCP6Q96RT7 1819 aa8.31□□□□□ -1.08
CU638689.4-204ENST00000624846 COL24A1Q17RW2 1714 aa8.3□□□□□ -1.08
CU638689.4-204ENST00000624846 NDUFV2P19404 249 aa8.3□□□□□ -1.08
CU638689.4-204ENST00000624846 TMPOP42166 694 aaKnown RBP8.3□□□□□ -1.08
CU638689.4-204ENST00000624846 MTMR2Q13614 643 aa8.3□□□□□ -1.08
CU638689.4-204ENST00000624846 VASH1Q7L8A9 365 aaPredicted RBP8.3□□□□□ -1.08
CU638689.4-204ENST00000624846 GPIHBP1Q8IV16 184 aa8.3□□□□□ -1.08
CU638689.4-204ENST00000624846 ACDQ96AP0 544 aa8.3□□□□□ -1.08
CU638689.4-204ENST00000624846 SRP68Q9UHB9 627 aaKnown RBP8.3□□□□□ -1.08
CU638689.4-204ENST00000624846 ZNF652Q9Y2D9 606 aa8.3□□□□□ -1.08
CU638689.4-204ENST00000624846 KCPQ6ZWJ8 1503 aa8.29□□□□□ -1.08
CU638689.4-204ENST00000624846 SPDYE5A6NIY4 337 aa8.29□□□□□ -1.08
CU638689.4-204ENST00000624846 IRF6O14896 467 aa8.29□□□□□ -1.08
CU638689.4-204ENST00000624846 NPHP1O15259 732 aa8.29□□□□□ -1.08
CU638689.4-204ENST00000624846 A1BGP04217 495 aa8.29□□□□□ -1.08
CU638689.4-204ENST00000624846 CALD1Q05682 793 aaKnown RBP8.29□□□□□ -1.08
CU638689.4-204ENST00000624846 CLEC4GQ6UXB4 293 aa8.29□□□□□ -1.08
CU638689.4-204ENST00000624846 KRTAP19-1Q8IUB9 90 aa8.29□□□□□ -1.08
CU638689.4-204ENST00000624846 GPCPD1Q9NPB8 672 aa8.29□□□□□ -1.08
CU638689.4-204ENST00000624846 TSPYL4Q9UJ04 414 aa8.29□□□□□ -1.08
CU638689.4-204ENST00000624846 USP16Q9Y5T5 823 aa8.29□□□□□ -1.08
CU638689.4-204ENST00000624846 COL5A3P25940 1745 aaPredicted RBP8.29□□□□□ -1.08
CU638689.4-204ENST00000624846 CICQ96RK0 1608 aaPredicted RBP8.29□□□□□ -1.08
CU638689.4-204ENST00000624846 KCNQ3O43525 872 aa8.28□□□□□ -1.08
CU638689.4-204ENST00000624846 TM4SF1P30408 202 aa8.28□□□□□ -1.08
CU638689.4-204ENST00000624846 NEUROD2Q15784 382 aa8.28□□□□□ -1.08
CU638689.4-204ENST00000624846 DZIP3Q86Y13 1208 aaKnown RBP8.28□□□□□ -1.08
CU638689.4-204ENST00000624846 TRMT44Q8IYL2 757 aaKnown RBP8.28□□□□□ -1.08
CU638689.4-204ENST00000624846 RNF217Q8TC41 542 aa8.28□□□□□ -1.08
CU638689.4-204ENST00000624846 SETDB2Q96T68 719 aa8.28□□□□□ -1.08
CU638689.4-204ENST00000624846 INSM2Q96T92 566 aaPredicted RBP8.28□□□□□ -1.08
CU638689.4-204ENST00000624846 MIS18AQ9NYP9 233 aa8.28□□□□□ -1.08
CU638689.4-204ENST00000624846 PIM2Q9P1W9 311 aa8.28□□□□□ -1.08
CU638689.4-204ENST00000624846 TBC1D2BQ9UPU7 963 aa8.28□□□□□ -1.08
CU638689.4-204ENST00000624846 POLRMTO00411 1230 aaKnown RBP8.27□□□□□ -1.09
CU638689.4-204ENST00000624846 GIGYF1O75420 1035 aaPredicted RBP8.27□□□□□ -1.09
CU638689.4-204ENST00000624846 SERPINB2P05120 415 aa8.27□□□□□ -1.09
CU638689.4-204ENST00000624846 EIF4A1P60842 406 aaKnown RBP8.27□□□□□ -1.09
CU638689.4-204ENST00000624846 SNRPNP63162 240 aaKnown RBP8.27□□□□□ -1.09
CU638689.4-204ENST00000624846 NFIXQ14938 502 aa8.27□□□□□ -1.09
CU638689.4-204ENST00000624846 PPP1R26Q5T8A7 1209 aaPredicted RBP8.27□□□□□ -1.09
CU638689.4-204ENST00000624846 CCDC146Q8IYE0 955 aa8.27□□□□□ -1.09
CU638689.4-204ENST00000624846 SPIRE2Q8WWL2 714 aa8.27□□□□□ -1.09
CU638689.4-204ENST00000624846 CHMP4AQ9BY43 222 aa8.27□□□□□ -1.09
CU638689.4-204ENST00000624846 BCS1LQ9Y276 419 aa8.27□□□□□ -1.09
CU638689.4-204ENST00000624846 TJP1Q07157 1748 aa8.26□□□□□ -1.09
CU638689.4-204ENST00000624846 MYH14Q7Z406 1995 aaKnown RBP8.26□□□□□ -1.09
CU638689.4-204ENST00000624846 A0A0G2JLW4 131 aa8.26□□□□□ -1.09
CU638689.4-204ENST00000624846 MOXD2PA6NHM9 499 aa8.26□□□□□ -1.09
CU638689.4-204ENST00000624846 YBX3P16989 372 aaKnown RBP eCLIP8.26□□□□□ -1.09
CU638689.4-204ENST00000624846 COL8A1P27658 744 aa8.26□□□□□ -1.09
CU638689.4-204ENST00000624846 PDE6BP35913 854 aa8.26□□□□□ -1.09
CU638689.4-204ENST00000624846 KIF6Q6ZMV9 814 aa8.26□□□□□ -1.09
CU638689.4-204ENST00000624846 BICDL1Q6ZP65 573 aa8.26□□□□□ -1.09
CU638689.4-204ENST00000624846 THUMPD2Q9BTF0 503 aaKnown RBP8.26□□□□□ -1.09
CU638689.4-204ENST00000624846 UBR2Q8IWV8 1755 aa8.25□□□□□ -1.09
CU638689.4-204ENST00000624846 CARMIL3Q8ND23 1372 aa8.25□□□□□ -1.09
CU638689.4-204ENST00000624846 VIRMAQ69YN4 1812 aaKnown RBP8.25□□□□□ -1.09
CU638689.4-204ENST00000624846 ERVV-1B6SEH8 477 aa8.25□□□□□ -1.09
CU638689.4-204ENST00000624846 H0YIN7 160 aa8.25□□□□□ -1.09
CU638689.4-204ENST00000624846 DPEP1P16444 411 aa8.25□□□□□ -1.09
CU638689.4-204ENST00000624846 GTF2E1P29083 439 aaPredicted RBP8.25□□□□□ -1.09
CU638689.4-204ENST00000624846 CLCN1P35523 988 aa8.25□□□□□ -1.09
CU638689.4-204ENST00000624846 ST5P78524 1137 aa8.25□□□□□ -1.09
CU638689.4-204ENST00000624846 DDR1Q08345 913 aa8.25□□□□□ -1.09
CU638689.4-204ENST00000624846 DALRD3Q5D0E6 543 aaKnown RBP8.25□□□□□ -1.09
CU638689.4-204ENST00000624846 TPTE2Q6XPS3 522 aa8.25□□□□□ -1.09
CU638689.4-204ENST00000624846 ALYREFQ86V81 257 aaKnown RBP8.25□□□□□ -1.09
CU638689.4-204ENST00000624846 AGBL1Q96MI9 1066 aa8.25□□□□□ -1.09
CU638689.4-204ENST00000624846 PGPEP1Q9NXJ5 209 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms