RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 KCNJ6P48051 423 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 FTOQ9C0B1 505 aaKnown RBP eCLIP7.1□□□□□ -1.27
CDKL5-205ENST00000623535 STMN4Q9H169 189 aaPredicted RBP7.1□□□□□ -1.27
CDKL5-205ENST00000623535 SLITRK6Q9H5Y7 841 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 TACC3Q9Y6A5 838 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 ZSCAN20P17040 1043 aaPredicted RBP7.1□□□□□ -1.27
CDKL5-205ENST00000623535 ERCC5P28715 1186 aaPredicted RBP7.1□□□□□ -1.27
CDKL5-205ENST00000623535 WASHC5Q12768 1159 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 NONOQ15233 471 aaKnown RBP eCLIP7.1□□□□□ -1.27
CDKL5-205ENST00000623535 COA7Q96BR5 231 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 EEF2P13639 858 aaKnown RBP7.1□□□□□ -1.27
CDKL5-205ENST00000623535 GNA11P29992 359 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 GADL1Q6ZQY3 521 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 CNKSR1Q969H4 720 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 ZNF428Q96B54 188 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 PDZRN3Q9UPQ7 1066 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 PPIP5K2O43314 1243 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 ABL1P00519 1130 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 TMEM57Q8N5G2 664 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 TNMDQ9H2S6 317 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 IQSEC3Q9UPP2 1182 aaPredicted RBP7.09□□□□□ -1.27
CDKL5-205ENST00000623535 TMCO5BA8MYB1 307 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 E2F5Q15329 346 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 RNF219Q5W0B1 726 aaPredicted RBP7.09□□□□□ -1.27
CDKL5-205ENST00000623535 DBF4Q9UBU7 674 aaPredicted RBP7.09□□□□□ -1.27
CDKL5-205ENST00000623535 WASLO00401 505 aaPredicted RBP7.09□□□□□ -1.27
CDKL5-205ENST00000623535 IREB2P48200 963 aaKnown RBP7.09□□□□□ -1.27
CDKL5-205ENST00000623535 TAF7Q15545 349 aaPredicted RBP7.09□□□□□ -1.27
CDKL5-205ENST00000623535 PNMA8AQ86V59 439 aaPredicted RBP7.09□□□□□ -1.27
CDKL5-205ENST00000623535 IQCA1LA6NCM1 817 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 RAB3GAP1Q15042 981 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 SPDYE1Q8NFV5 336 aaPredicted RBP7.09□□□□□ -1.27
CDKL5-205ENST00000623535 SPDYE2BA6NHP3 402 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 SNRPA1P09661 255 aaKnown RBP7.09□□□□□ -1.27
CDKL5-205ENST00000623535 SPDYE6P0CI01 402 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 TSPY1Q01534 308 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 ADALQ6DHV7 355 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 RNF169Q8NCN4 708 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 KCNG4Q8TDN1 519 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 ZW10O43264 779 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 IFIT1BQ5T764 474 aaKnown RBP7.09□□□□□ -1.27
CDKL5-205ENST00000623535 MIS12Q9H081 205 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 GGA1Q9UJY5 639 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 PPFIA1Q13136 1202 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 FAM204AQ9H8W3 233 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 PLEKHH1Q9ULM0 1364 aa7.09□□□□□ -1.27
CDKL5-205ENST00000623535 SPECC1Q5M775 1068 aa7.09□□□□□ -1.28
CDKL5-205ENST00000623535 E4F1Q66K89 784 aaPredicted RBP7.09□□□□□ -1.28
CDKL5-205ENST00000623535 ACEP12821 1306 aa7.09□□□□□ -1.28
CDKL5-205ENST00000623535 SFSWAPQ12872 951 aaKnown RBP7.09□□□□□ -1.28
CDKL5-205ENST00000623535 TFIP11Q9UBB9 837 aaKnown RBP7.09□□□□□ -1.28
CDKL5-205ENST00000623535 TNNQ9UQP3 1299 aa7.09□□□□□ -1.28
CDKL5-205ENST00000623535 AMOTL2Q9Y2J4 779 aa7.09□□□□□ -1.28
CDKL5-205ENST00000623535 CRACR2AQ9BSW2 395 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 SLC12A6Q9UHW9 1150 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 TLR3O15455 904 aaKnown RBP7.08□□□□□ -1.28
CDKL5-205ENST00000623535 SEC24BO95487 1268 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 TNNT1P13805 278 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 PRPF4BQ13523 1007 aaKnown RBP7.08□□□□□ -1.28
CDKL5-205ENST00000623535 TTC22Q5TAA0 569 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 EHBP1Q8NDI1 1231 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 KIF1BPQ96EK5 621 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 PRMT3O60678 531 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 MCMDC2Q4G0Z9 681 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 LARP1BQ659C4 914 aaKnown RBP7.08□□□□□ -1.28
CDKL5-205ENST00000623535 ANO3Q9BYT9 981 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 MAP3K20Q9NYL2 800 aaKnown RBP7.08□□□□□ -1.28
CDKL5-205ENST00000623535 ZBBXA8MT70 800 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 SETSIPP0DME0 302 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 RPL13P26373 211 aaKnown RBP7.08□□□□□ -1.28
CDKL5-205ENST00000623535 CKAP4Q07065 602 aaKnown RBP7.08□□□□□ -1.28
CDKL5-205ENST00000623535 NLRX1Q86UT6 975 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 METTL23Q86XA0 190 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 LMBR1Q8WVP7 490 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 PRKRIP1Q9H875 184 aaPredicted RBP7.08□□□□□ -1.28
CDKL5-205ENST00000623535 FAM50BQ9Y247 325 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 SRPRBQ9Y5M8 271 aaKnown RBP7.08□□□□□ -1.28
CDKL5-205ENST00000623535 KCTD2Q14681 263 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 GPBP1L1Q9HC44 474 aaPredicted RBP7.08□□□□□ -1.28
CDKL5-205ENST00000623535 TTC21BQ7Z4L5 1316 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 RIMBP2O15034 1052 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 PYGLP06737 847 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 STK3Q13188 491 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 MAPK8IP2Q13387 824 aaPredicted RBP7.08□□□□□ -1.28
CDKL5-205ENST00000623535 PDZD4Q76G19 769 aaPredicted RBP7.08□□□□□ -1.28
CDKL5-205ENST00000623535 SPAG5Q96R06 1193 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 YEATS2Q9ULM3 1422 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 TMEM132EQ6IEE7 984 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 SDCCAG8Q86SQ7 713 aaPredicted RBP7.08□□□□□ -1.28
CDKL5-205ENST00000623535 RAB11FIP4Q86YS3 637 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 FRMD4BQ9Y2L6 1034 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 NAPAP54920 295 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 WDR17Q8IZU2 1322 aa7.08□□□□□ -1.28
CDKL5-205ENST00000623535 EIF3CLB5ME19 914 aaKnown RBP7.07□□□□□ -1.28
CDKL5-205ENST00000623535 PRPF6O94906 941 aaKnown RBP7.07□□□□□ -1.28
CDKL5-205ENST00000623535 SP4Q02446 784 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 MCTP2Q6DN12 878 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 TAOK1Q7L7X3 1001 aa7.07□□□□□ -1.28
CDKL5-205ENST00000623535 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.07□□□□□ -1.28
CDKL5-205ENST00000623535 EPSTI1Q96J88 318 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms