RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 PALD1Q9ULE6 856 aa18.05■□□□□ 0.48
ATRX-211ENST00000623321 LEMD3Q9Y2U8 911 aa18.05■□□□□ 0.48
ATRX-211ENST00000623321 ZNF804BA4D1E1 1349 aa18.05■□□□□ 0.48
ATRX-211ENST00000623321 AKAP11Q9UKA4 1901 aa18.04■□□□□ 0.48
ATRX-211ENST00000623321 SPATA5Q8NB90 893 aa18.04■□□□□ 0.48
ATRX-211ENST00000623321 ANP32BQ92688 251 aaKnown RBP18.04■□□□□ 0.48
ATRX-211ENST00000623321 MASTLQ96GX5 879 aa18.04■□□□□ 0.48
ATRX-211ENST00000623321 GNL3LQ9NVN8 582 aaKnown RBP18.04■□□□□ 0.48
ATRX-211ENST00000623321 HMG20BQ9P0W2 317 aa18.04■□□□□ 0.48
ATRX-211ENST00000623321 XDHP47989 1333 aa18.04■□□□□ 0.48
ATRX-211ENST00000623321 BRD1O95696 1058 aa18.03■□□□□ 0.48
ATRX-211ENST00000623321 GYG1P46976 350 aa18.03■□□□□ 0.48
ATRX-211ENST00000623321 GPT2Q8TD30 523 aa18.03■□□□□ 0.48
ATRX-211ENST00000623321 UPF1Q92900 1129 aaKnown RBP eCLIP18.03■□□□□ 0.48
ATRX-211ENST00000623321 FAM84BQ96KN1 310 aaPredicted RBP18.03■□□□□ 0.48
ATRX-211ENST00000623321 A0A0D9SFI3 127 aa18.03■□□□□ 0.48
ATRX-211ENST00000623321 PRPF40AO75400 957 aaKnown RBP18.03■□□□□ 0.48
ATRX-211ENST00000623321 RASGRF1Q13972 1273 aa18.03■□□□□ 0.48
ATRX-211ENST00000623321 RNF113AO15541 343 aaKnown RBP18.02■□□□□ 0.48
ATRX-211ENST00000623321 ZFYP08048 801 aaPredicted RBP18.02■□□□□ 0.48
ATRX-211ENST00000623321 FBXO33Q7Z6M2 555 aa18.02■□□□□ 0.48
ATRX-211ENST00000623321 VPS37DQ86XT2 251 aa18.02■□□□□ 0.48
ATRX-211ENST00000623321 SP8Q8IXZ3 490 aa18.02■□□□□ 0.48
ATRX-211ENST00000623321 LSG1Q9H089 658 aaKnown RBP18.02■□□□□ 0.48
ATRX-211ENST00000623321 H0YIN7 160 aa18.01■□□□□ 0.47
ATRX-211ENST00000623321 PPEF1O14829 653 aaPredicted RBP18.01■□□□□ 0.47
ATRX-211ENST00000623321 MBD3O95983 291 aa18.01■□□□□ 0.47
ATRX-211ENST00000623321 NCLP19338 710 aaKnown RBP18.01■□□□□ 0.47
ATRX-211ENST00000623321 GPSM2P81274 684 aa18.01■□□□□ 0.47
ATRX-211ENST00000623321 MCMDC2Q4G0Z9 681 aa18.01■□□□□ 0.47
ATRX-211ENST00000623321 C2CD5Q86YS7 1000 aa18.01■□□□□ 0.47
ATRX-211ENST00000623321 NSFL1CQ9UNZ2 370 aaKnown RBP18.01■□□□□ 0.47
ATRX-211ENST00000623321 ATP2B4P23634 1241 aa18.01■□□□□ 0.47
ATRX-211ENST00000623321 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.01■□□□□ 0.47
ATRX-211ENST00000623321 HELLSQ9NRZ9 838 aa18.01■□□□□ 0.47
ATRX-211ENST00000623321 PODXL2Q9NZ53 605 aa18.01■□□□□ 0.47
ATRX-211ENST00000623321 ATP6V0A2Q9Y487 856 aa18.01■□□□□ 0.47
ATRX-211ENST00000623321 MED23Q9ULK4 1368 aa18■□□□□ 0.47
ATRX-211ENST00000623321 CHGBP05060 677 aa18■□□□□ 0.47
ATRX-211ENST00000623321 KLRK1P26718 216 aa18■□□□□ 0.47
ATRX-211ENST00000623321 HIBADHP31937 336 aaKnown RBP18■□□□□ 0.47
ATRX-211ENST00000623321 HSPA4P34932 840 aa18■□□□□ 0.47
ATRX-211ENST00000623321 ZMYM1Q5SVZ6 1142 aa18■□□□□ 0.47
ATRX-211ENST00000623321 STYK1Q6J9G0 422 aa18■□□□□ 0.47
ATRX-211ENST00000623321 IRS2Q9Y4H2 1338 aa17.99■□□□□ 0.47
ATRX-211ENST00000623321 SEMA3EO15041 775 aa17.99■□□□□ 0.47
ATRX-211ENST00000623321 ZBTB22O15209 634 aa17.99■□□□□ 0.47
ATRX-211ENST00000623321 ZSCAN25Q6NSZ9 544 aa17.99■□□□□ 0.47
ATRX-211ENST00000623321 C15orf52Q6ZUT6 534 aaKnown RBP17.99■□□□□ 0.47
ATRX-211ENST00000623321 SLC51AQ86UW1 340 aa17.99■□□□□ 0.47
ATRX-211ENST00000623321 ZNF622Q969S3 477 aaKnown RBP eCLIP17.99■□□□□ 0.471e-11■■■■□ 24.3
ATRX-211ENST00000623321 NAP1L5Q96NT1 182 aaPredicted RBP17.99■□□□□ 0.47
ATRX-211ENST00000623321 PIH1D3Q9NQM4 214 aaKnown RBP17.99■□□□□ 0.47
ATRX-211ENST00000623321 COL11A2P13942 1736 aaPredicted RBP17.99■□□□□ 0.47
ATRX-211ENST00000623321 HS1BP3Q53T59 392 aa17.99■□□□□ 0.47
ATRX-211ENST00000623321 ILDR2Q71H61 639 aa17.99■□□□□ 0.47
ATRX-211ENST00000623321 GGA1Q9UJY5 639 aa17.99■□□□□ 0.47
ATRX-211ENST00000623321 DENND2AQ9ULE3 1009 aa17.99■□□□□ 0.47
ATRX-211ENST00000623321 CCDC171Q6TFL3 1326 aa17.98■□□□□ 0.47
ATRX-211ENST00000623321 ZNF589Q86UQ0 364 aaPredicted RBP17.98■□□□□ 0.47
ATRX-211ENST00000623321 TXNRD3Q86VQ6 643 aa17.98■□□□□ 0.47
ATRX-211ENST00000623321 ZSCAN30Q86W11 494 aa17.98■□□□□ 0.47
ATRX-211ENST00000623321 SEC62Q99442 399 aaKnown RBP17.98■□□□□ 0.47
ATRX-211ENST00000623321 RBSNQ9H1K0 784 aa17.98■□□□□ 0.47
ATRX-211ENST00000623321 IDH1O75874 414 aaKnown RBP17.97■□□□□ 0.47
ATRX-211ENST00000623321 UFL1O94874 794 aa17.97■□□□□ 0.47
ATRX-211ENST00000623321 PTH1RQ03431 593 aa17.97■□□□□ 0.47
ATRX-211ENST00000623321 LRSAM1Q6UWE0 723 aa17.97■□□□□ 0.47
ATRX-211ENST00000623321 PDLIM2Q96JY6 352 aa17.97■□□□□ 0.47
ATRX-211ENST00000623321 IQSEC3Q9UPP2 1182 aaPredicted RBP17.97■□□□□ 0.47
ATRX-211ENST00000623321 LRRC37AA6NMS7 1700 aa17.97■□□□□ 0.47
ATRX-211ENST00000623321 ADD2P35612 726 aa17.97■□□□□ 0.47
ATRX-211ENST00000623321 MAP3K12Q12852 859 aa17.97■□□□□ 0.47
ATRX-211ENST00000623321 SLFNL1Q499Z3 407 aa17.97■□□□□ 0.47
ATRX-211ENST00000623321 SLC9C2Q5TAH2 1124 aa17.97■□□□□ 0.47
ATRX-211ENST00000623321 APPBP2Q92624 585 aa17.97■□□□□ 0.47
ATRX-211ENST00000623321 MAP4K1Q92918 833 aa17.97■□□□□ 0.47
ATRX-211ENST00000623321 CNKSR1Q969H4 720 aa17.97■□□□□ 0.47
ATRX-211ENST00000623321 TMX4Q9H1E5 349 aaPredicted RBP17.97■□□□□ 0.47
ATRX-211ENST00000623321 TMEM63CQ9P1W3 806 aa17.97■□□□□ 0.47
ATRX-211ENST00000623321 RBM27Q9P2N5 1060 aaKnown RBP17.97■□□□□ 0.47
ATRX-211ENST00000623321 PDS5AQ29RF7 1337 aaKnown RBP17.96■□□□□ 0.47
ATRX-211ENST00000623321 UBE3CQ15386 1083 aa17.96■□□□□ 0.47
ATRX-211ENST00000623321 WASHC4Q2M389 1173 aa17.96■□□□□ 0.47
ATRX-211ENST00000623321 TBC1D16Q8TBP0 767 aa17.96■□□□□ 0.47
ATRX-211ENST00000623321 C10orf71Q711Q0 1435 aa17.95■□□□□ 0.46
ATRX-211ENST00000623321 CHRNA5P30532 468 aa17.95■□□□□ 0.46
ATRX-211ENST00000623321 OSBP2Q969R2 916 aa17.95■□□□□ 0.46
ATRX-211ENST00000623321 MTFR1LQ9H019 292 aa17.95■□□□□ 0.46
ATRX-211ENST00000623321 POLLQ9UGP5 575 aa17.95■□□□□ 0.46
ATRX-211ENST00000623321 ZBTB7AO95365 584 aa17.95■□□□□ 0.46
ATRX-211ENST00000623321 R3HDM1Q15032 1099 aaKnown RBP17.95■□□□□ 0.46
ATRX-211ENST00000623321 CCDC129Q6ZRS4 1044 aa17.95■□□□□ 0.46
ATRX-211ENST00000623321 ZNF804AQ7Z570 1209 aa17.95■□□□□ 0.46
ATRX-211ENST00000623321 UPF3BQ9BZI7 483 aaKnown RBP17.95■□□□□ 0.46
ATRX-211ENST00000623321 MYH7P12883 1935 aa17.94■□□□□ 0.46
ATRX-211ENST00000623321 MAST3O60307 1309 aa17.94■□□□□ 0.46
ATRX-211ENST00000623321 C6orf229H3BNL8 230 aa17.94■□□□□ 0.46
ATRX-211ENST00000623321 PDE6AP16499 860 aa17.94■□□□□ 0.46
ATRX-211ENST00000623321 MPNDQ8N594 471 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms