RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 BCL11AQ9H165 835 aa15.23■□□□□ 0.03
LINC00963-216ENST00000623185 GOLGB1Q14789 3259 aaKnown RBP15.23■□□□□ 0.03
LINC00963-216ENST00000623185 ERC2O15083 957 aa15.22■□□□□ 0.03
LINC00963-216ENST00000623185 RAD17O75943 681 aa15.22■□□□□ 0.03
LINC00963-216ENST00000623185 MX1P20591 662 aa15.22■□□□□ 0.03
LINC00963-216ENST00000623185 MMP14P50281 582 aa15.22■□□□□ 0.03
LINC00963-216ENST00000623185 PDE1AP54750 535 aa15.22■□□□□ 0.03
LINC00963-216ENST00000623185 RASGRF1Q13972 1273 aa15.22■□□□□ 0.03
LINC00963-216ENST00000623185 DACT2Q5SW24 774 aa15.22■□□□□ 0.03
LINC00963-216ENST00000623185 PLEKHM2Q8IWE5 1019 aa15.22■□□□□ 0.03
LINC00963-216ENST00000623185 GPC2Q8N158 579 aa15.22■□□□□ 0.03
LINC00963-216ENST00000623185 SPATA5Q8NB90 893 aa15.22■□□□□ 0.03
LINC00963-216ENST00000623185 HMG20BQ9P0W2 317 aa15.22■□□□□ 0.03
LINC00963-216ENST00000623185 GLTPD2A6NH11 291 aa15.21■□□□□ 0.03
LINC00963-216ENST00000623185 PSMD14O00487 310 aa15.21■□□□□ 0.03
LINC00963-216ENST00000623185 GLRX3O76003 335 aaKnown RBP15.21■□□□□ 0.03
LINC00963-216ENST00000623185 MCAMP43121 646 aa15.21■□□□□ 0.03
LINC00963-216ENST00000623185 AGBL3Q8NEM8 1001 aa15.21■□□□□ 0.03
LINC00963-216ENST00000623185 OTUD7AQ8TE49 926 aaPredicted RBP15.21■□□□□ 0.03
LINC00963-216ENST00000623185 IQSEC3Q9UPP2 1182 aaPredicted RBP15.21■□□□□ 0.03
LINC00963-216ENST00000623185 SUGT1Q9Y2Z0 365 aa15.21■□□□□ 0.03
LINC00963-216ENST00000623185 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.03
LINC00963-216ENST00000623185 SALL1Q9NSC2 1324 aa15.2■□□□□ 0.02
LINC00963-216ENST00000623185 RPS12P25398 132 aaKnown RBP15.2■□□□□ 0.02
LINC00963-216ENST00000623185 SCARF1Q14162 830 aa15.2■□□□□ 0.02
LINC00963-216ENST00000623185 RSBN1LQ6PCB5 846 aaPredicted RBP15.2■□□□□ 0.02
LINC00963-216ENST00000623185 ZGPATQ8N5A5 531 aaKnown RBP15.2■□□□□ 0.02
LINC00963-216ENST00000623185 DPF2Q92785 391 aa15.2■□□□□ 0.02
LINC00963-216ENST00000623185 GMLQ99445 158 aa15.2■□□□□ 0.02
LINC00963-216ENST00000623185 HAUS7Q99871 368 aa15.2■□□□□ 0.02
LINC00963-216ENST00000623185 MRIQ9BWK5 157 aa15.2■□□□□ 0.02
LINC00963-216ENST00000623185 AOX1Q06278 1338 aa15.19■□□□□ 0.02
LINC00963-216ENST00000623185 MYO3BQ8WXR4 1341 aa15.19■□□□□ 0.02
LINC00963-216ENST00000623185 COL4A5P29400 1685 aa15.19■□□□□ 0.02
LINC00963-216ENST00000623185 SBF1O95248 1867 aa15.19■□□□□ 0.02
LINC00963-216ENST00000623185 PDE4AP27815 886 aa15.19■□□□□ 0.02
LINC00963-216ENST00000623185 SPTY2D1Q68D10 685 aaPredicted RBP15.19■□□□□ 0.02
LINC00963-216ENST00000623185 PI4K2BQ8TCG2 481 aa15.19■□□□□ 0.02
LINC00963-216ENST00000623185 BOLA2Q9H3K6 86 aa15.19■□□□□ 0.02
LINC00963-216ENST00000623185 DDNO94850 711 aaPredicted RBP15.18■□□□□ 0.02
LINC00963-216ENST00000623185 CYP2E1P05181 493 aaPredicted RBP15.18■□□□□ 0.02
LINC00963-216ENST00000623185 ZAP70P43403 619 aa15.18■□□□□ 0.02
LINC00963-216ENST00000623185 CHAF1AQ13111 956 aaPredicted RBP15.18■□□□□ 0.02
LINC00963-216ENST00000623185 TTF1Q15361 905 aaPredicted RBP15.18■□□□□ 0.02
LINC00963-216ENST00000623185 MFSD14BQ5SR56 506 aa15.18■□□□□ 0.02
LINC00963-216ENST00000623185 A0A1B0GUL6 1792 aa15.18■□□□□ 0.02
LINC00963-216ENST00000623185 ZNF541Q9H0D2 1346 aa15.17■□□□□ 0.02
LINC00963-216ENST00000623185 TMED8Q6PL24 325 aaPredicted RBP15.17■□□□□ 0.02
LINC00963-216ENST00000623185 TICAM2Q86XR7 235 aa15.17■□□□□ 0.02
LINC00963-216ENST00000623185 CERS5Q8N5B7 392 aa15.17■□□□□ 0.02
LINC00963-216ENST00000623185 L3MBTL3Q96JM7 780 aaPredicted RBP15.17■□□□□ 0.02
LINC00963-216ENST00000623185 SNRKQ9NRH2 765 aa15.17■□□□□ 0.02
LINC00963-216ENST00000623185 GJA3Q9Y6H8 435 aa15.17■□□□□ 0.02
LINC00963-216ENST00000623185 HDLBPQ00341 1268 aaKnown RBP15.16■□□□□ 0.02
LINC00963-216ENST00000623185 PI16Q6UXB8 463 aa15.16■□□□□ 0.02
LINC00963-216ENST00000623185 OGFOD1Q8N543 542 aa15.16■□□□□ 0.02
LINC00963-216ENST00000623185 FBXW7Q969H0 707 aa15.16■□□□□ 0.02
LINC00963-216ENST00000623185 ZBTB12Q9Y330 459 aaPredicted RBP15.16■□□□□ 0.02
LINC00963-216ENST00000623185 LDHBP07195 334 aaKnown RBP15.15■□□□□ 0.02
LINC00963-216ENST00000623185 USP17L8P0C7I0 530 aa15.15■□□□□ 0.02
LINC00963-216ENST00000623185 TSHZ3Q63HK5 1081 aa15.15■□□□□ 0.02
LINC00963-216ENST00000623185 TBC1D9Q6ZT07 1266 aa15.15■□□□□ 0.02
LINC00963-216ENST00000623185 ERICH6Q7L0X2 663 aa15.15■□□□□ 0.02
LINC00963-216ENST00000623185 MXD3Q9BW11 206 aa15.15■□□□□ 0.02
LINC00963-216ENST00000623185 PAG1Q9NWQ8 432 aa15.15■□□□□ 0.02
LINC00963-216ENST00000623185 LRP2BPQ9P2M1 347 aa15.15■□□□□ 0.02
LINC00963-216ENST00000623185 ABCF2Q9UG63 623 aa15.15■□□□□ 0.02
LINC00963-216ENST00000623185 CNOT7Q9UIV1 285 aaKnown RBP15.15■□□□□ 0.02
LINC00963-216ENST00000623185 JAG2Q9Y219 1238 aa15.15■□□□□ 0.02
LINC00963-216ENST00000623185 DICER1Q9UPY3 1922 aaKnown RBP15.14■□□□□ 0.01
LINC00963-216ENST00000623185 H7C1D1 291 aa15.14■□□□□ 0.01
LINC00963-216ENST00000623185 GMPSP49915 693 aaPredicted RBP15.14■□□□□ 0.01
LINC00963-216ENST00000623185 ZNF280AP59817 542 aaPredicted RBP15.14■□□□□ 0.01
LINC00963-216ENST00000623185 EVI5LQ96CN4 794 aa15.14■□□□□ 0.01
LINC00963-216ENST00000623185 FAM163AQ96GL9 167 aaPredicted RBP15.14■□□□□ 0.01
LINC00963-216ENST00000623185 DNAJC2Q99543 621 aaKnown RBP15.14■□□□□ 0.01
LINC00963-216ENST00000623185 ANTXR1Q9H6X2 564 aa15.14■□□□□ 0.01
LINC00963-216ENST00000623185 GPRC5DQ9NZD1 345 aa15.14■□□□□ 0.01
LINC00963-216ENST00000623185 HDAC9Q9UKV0 1011 aa15.14■□□□□ 0.01
LINC00963-216ENST00000623185 UTRNP46939 3433 aa15.14■□□□□ 0.01
LINC00963-216ENST00000623185 GOLIM4O00461 696 aa15.13■□□□□ 0.01
LINC00963-216ENST00000623185 SCNN1DP51172 638 aa15.13■□□□□ 0.01
LINC00963-216ENST00000623185 MAP3K12Q12852 859 aa15.13■□□□□ 0.01
LINC00963-216ENST00000623185 CCDC88AQ3V6T2 1871 aa15.13■□□□□ 0.01
LINC00963-216ENST00000623185 HHIPL2Q6UWX4 724 aa15.13■□□□□ 0.01
LINC00963-216ENST00000623185 KIAA0825Q8IV33 1275 aa15.13■□□□□ 0.01
LINC00963-216ENST00000623185 SLF2Q8IX21 1173 aa15.13■□□□□ 0.01
LINC00963-216ENST00000623185 ARAP2Q8WZ64 1704 aa15.13■□□□□ 0.01
LINC00963-216ENST00000623185 PIH1D3Q9NQM4 214 aaKnown RBP15.13■□□□□ 0.01
LINC00963-216ENST00000623185 SERPINA10Q9UK55 444 aa15.13■□□□□ 0.01
LINC00963-216ENST00000623185 TTF2Q9UNY4 1162 aaKnown RBP15.13■□□□□ 0.01
LINC00963-216ENST00000623185 NDUFB9Q9Y6M9 179 aa15.13■□□□□ 0.01
LINC00963-216ENST00000623185 MAST3O60307 1309 aa15.13■□□□□ 0.01
LINC00963-216ENST00000623185 CHD4Q14839 1912 aa15.12■□□□□ 0.01
LINC00963-216ENST00000623185 IQCA1LA6NCM1 817 aa15.12■□□□□ 0.01
LINC00963-216ENST00000623185 POTECB2RU33 542 aa15.12■□□□□ 0.01
LINC00963-216ENST00000623185 LDHCP07864 332 aa15.12■□□□□ 0.01
LINC00963-216ENST00000623185 VEGFAP15692 232 aaPredicted RBP15.12■□□□□ 0.01
LINC00963-216ENST00000623185 LMOD1P29536 600 aaPredicted RBP15.12■□□□□ 0.01
LINC00963-216ENST00000623185 PRDX5P30044 214 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms