RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 MYO3BQ8WXR4 1341 aa12.79□□□□□ -0.36
PCDHGC3-207ENST00000622656 BRPF1P55201 1214 aaPredicted RBP12.78□□□□□ -0.36
PCDHGC3-207ENST00000622656 UBE4AQ14139 1066 aa12.78□□□□□ -0.36
PCDHGC3-207ENST00000622656 GRIK5Q16478 980 aa12.78□□□□□ -0.36
PCDHGC3-207ENST00000622656 ZNF804AQ7Z570 1209 aa12.78□□□□□ -0.36
PCDHGC3-207ENST00000622656 IQSEC3Q9UPP2 1182 aaPredicted RBP12.78□□□□□ -0.36
PCDHGC3-207ENST00000622656 PITPNM2Q9BZ72 1349 aa12.78□□□□□ -0.36
PCDHGC3-207ENST00000622656 PAPPA2Q9BXP8 1791 aa12.78□□□□□ -0.36
PCDHGC3-207ENST00000622656 BCAR3O75815 825 aa12.77□□□□□ -0.37
PCDHGC3-207ENST00000622656 CT47B1P0C2W7 299 aaPredicted RBP12.77□□□□□ -0.37
PCDHGC3-207ENST00000622656 CTCFP49711 727 aaPredicted RBP12.77□□□□□ -0.37
PCDHGC3-207ENST00000622656 MAP2K1Q02750 393 aaPredicted RBP12.77□□□□□ -0.37
PCDHGC3-207ENST00000622656 PTPN12Q05209 780 aaKnown RBP12.77□□□□□ -0.37
PCDHGC3-207ENST00000622656 RGMBQ6NW40 437 aa12.77□□□□□ -0.37
PCDHGC3-207ENST00000622656 OGFOD1Q8N543 542 aa12.77□□□□□ -0.37
PCDHGC3-207ENST00000622656 C2orf69Q8N8R5 385 aa12.77□□□□□ -0.37
PCDHGC3-207ENST00000622656 TDRD7Q8NHU6 1098 aaKnown RBP12.77□□□□□ -0.37
PCDHGC3-207ENST00000622656 AIDAQ96BJ3 306 aa12.77□□□□□ -0.37
PCDHGC3-207ENST00000622656 MEIS3Q99687 375 aa12.77□□□□□ -0.37
PCDHGC3-207ENST00000622656 FZD1Q9UP38 647 aa12.77□□□□□ -0.37
PCDHGC3-207ENST00000622656 AKAP11Q9UKA4 1901 aa12.76□□□□□ -0.37
PCDHGC3-207ENST00000622656 MAP2K2P36507 400 aa12.76□□□□□ -0.37
PCDHGC3-207ENST00000622656 METTL24Q5JXM2 366 aa12.76□□□□□ -0.37
PCDHGC3-207ENST00000622656 ATG9AQ7Z3C6 839 aa12.76□□□□□ -0.37
PCDHGC3-207ENST00000622656 FAM205AQ6ZU69 1335 aa12.76□□□□□ -0.37
PCDHGC3-207ENST00000622656 MROH5Q6ZUA9 1318 aa12.76□□□□□ -0.37
PCDHGC3-207ENST00000622656 UBE2Q2LH0YL09 131 aa12.75□□□□□ -0.37
PCDHGC3-207ENST00000622656 PDE8BO95263 885 aa12.75□□□□□ -0.37
PCDHGC3-207ENST00000622656 FGFR2P21802 821 aa12.75□□□□□ -0.37
PCDHGC3-207ENST00000622656 HIBADHP31937 336 aaKnown RBP12.75□□□□□ -0.37
PCDHGC3-207ENST00000622656 BCAMP50895 628 aa12.75□□□□□ -0.37
PCDHGC3-207ENST00000622656 ZNF157P51786 506 aaPredicted RBP12.75□□□□□ -0.37
PCDHGC3-207ENST00000622656 HNRNPUQ00839 825 aaKnown RBP eCLIP12.75□□□□□ -0.37
PCDHGC3-207ENST00000622656 CFAP100Q494V2 611 aa12.75□□□□□ -0.37
PCDHGC3-207ENST00000622656 FBXO33Q7Z6M2 555 aa12.75□□□□□ -0.37
PCDHGC3-207ENST00000622656 PRMT6Q96LA8 375 aaPredicted RBP12.75□□□□□ -0.37
PCDHGC3-207ENST00000622656 API5Q9BZZ5 524 aaKnown RBP12.75□□□□□ -0.37
PCDHGC3-207ENST00000622656 PRDM10Q9NQV6 1147 aa12.75□□□□□ -0.37
PCDHGC3-207ENST00000622656 PA2G4Q9UQ80 394 aaKnown RBP12.75□□□□□ -0.37
PCDHGC3-207ENST00000622656 LRRFIP2Q9Y608 721 aaKnown RBP12.75□□□□□ -0.37
PCDHGC3-207ENST00000622656 SSC5DA1L4H1 1573 aa12.74□□□□□ -0.37
PCDHGC3-207ENST00000622656 CLRN2A0PK11 232 aa12.74□□□□□ -0.37
PCDHGC3-207ENST00000622656 EYA2O00167 538 aa12.74□□□□□ -0.37
PCDHGC3-207ENST00000622656 SLC34A2O95436 690 aa12.74□□□□□ -0.37
PCDHGC3-207ENST00000622656 SLC10A3P09131 477 aa12.74□□□□□ -0.37
PCDHGC3-207ENST00000622656 UBTFL1P0CB47 393 aaPredicted RBP12.74□□□□□ -0.37
PCDHGC3-207ENST00000622656 PRKG1Q13976 671 aa12.74□□□□□ -0.37
PCDHGC3-207ENST00000622656 DLGAP5Q15398 846 aa12.74□□□□□ -0.37
PCDHGC3-207ENST00000622656 SIL1Q9H173 461 aa12.74□□□□□ -0.37
PCDHGC3-207ENST00000622656 HDAC9Q9UKV0 1011 aa12.74□□□□□ -0.37
PCDHGC3-207ENST00000622656 COL1A1P02452 1464 aaPredicted RBP12.73□□□□□ -0.37
PCDHGC3-207ENST00000622656 TRIM27P14373 513 aa12.73□□□□□ -0.37
PCDHGC3-207ENST00000622656 FKBP1AP62942 108 aaKnown RBP12.73□□□□□ -0.37
PCDHGC3-207ENST00000622656 KIF23Q02241 960 aaPredicted RBP12.73□□□□□ -0.37
PCDHGC3-207ENST00000622656 CHAF1AQ13111 956 aaPredicted RBP12.73□□□□□ -0.37
PCDHGC3-207ENST00000622656 NOGQ13253 232 aa12.73□□□□□ -0.37
PCDHGC3-207ENST00000622656 MFSD14BQ5SR56 506 aa12.73□□□□□ -0.37
PCDHGC3-207ENST00000622656 INTS3Q68E01 1043 aaKnown RBP12.73□□□□□ -0.37
PCDHGC3-207ENST00000622656 RASAL3Q86YV0 1011 aa12.73□□□□□ -0.37
PCDHGC3-207ENST00000622656 MTMR14Q8NCE2 650 aa12.73□□□□□ -0.37
PCDHGC3-207ENST00000622656 CLUAP1Q96AJ1 413 aa12.73□□□□□ -0.37
PCDHGC3-207ENST00000622656 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.73□□□□□ -0.37
PCDHGC3-207ENST00000622656 OTOFQ9HC10 1997 aa12.72□□□□□ -0.37
PCDHGC3-207ENST00000622656 KIF16BQ96L93 1317 aa12.72□□□□□ -0.37
PCDHGC3-207ENST00000622656 SPDYE2BA6NHP3 402 aa12.72□□□□□ -0.37
PCDHGC3-207ENST00000622656 SPDYE6P0CI01 402 aa12.72□□□□□ -0.37
PCDHGC3-207ENST00000622656 ARHGAP45Q92619 1136 aa12.72□□□□□ -0.37
PCDHGC3-207ENST00000622656 FRAT1Q92837 279 aaPredicted RBP12.72□□□□□ -0.37
PCDHGC3-207ENST00000622656 TTF2Q9UNY4 1162 aaKnown RBP12.72□□□□□ -0.37
PCDHGC3-207ENST00000622656 POTEDQ86YR6 584 aa12.71□□□□□ -0.37
PCDHGC3-207ENST00000622656 APOBEC3FQ8IUX4 373 aaKnown RBP12.71□□□□□ -0.37
PCDHGC3-207ENST00000622656 CDAN1Q8IWY9 1227 aa12.71□□□□□ -0.37
PCDHGC3-207ENST00000622656 CSRNP1Q96S65 589 aa12.71□□□□□ -0.37
PCDHGC3-207ENST00000622656 DEFB129Q9H1M3 183 aa12.71□□□□□ -0.37
PCDHGC3-207ENST00000622656 TDRD3Q9H7E2 651 aaKnown RBP12.71□□□□□ -0.37
PCDHGC3-207ENST00000622656 MMP14P50281 582 aa12.7□□□□□ -0.38
PCDHGC3-207ENST00000622656 RBM5P52756 815 aaKnown RBP eCLIP12.7□□□□□ -0.38
PCDHGC3-207ENST00000622656 FKBP1BP68106 108 aa12.7□□□□□ -0.38
PCDHGC3-207ENST00000622656 TTLL12Q14166 644 aaPredicted RBP12.7□□□□□ -0.38
PCDHGC3-207ENST00000622656 PUM3Q15397 648 aaKnown RBP12.7□□□□□ -0.38
PCDHGC3-207ENST00000622656 ATF7IPQ6VMQ6 1270 aa12.7□□□□□ -0.38
PCDHGC3-207ENST00000622656 CCDC102AQ96A19 550 aa12.7□□□□□ -0.38
PCDHGC3-207ENST00000622656 BEGAINQ9BUH8 593 aa12.7□□□□□ -0.38
PCDHGC3-207ENST00000622656 ADORA1P30542 326 aa12.69□□□□□ -0.38
PCDHGC3-207ENST00000622656 CRKP46108 304 aa12.69□□□□□ -0.38
PCDHGC3-207ENST00000622656 MKRN3Q13064 507 aaKnown RBP12.69□□□□□ -0.38
PCDHGC3-207ENST00000622656 CAVIN4Q5BKX8 364 aa12.69□□□□□ -0.38
PCDHGC3-207ENST00000622656 NBPF12Q5TAG4 269 aaPredicted RBP12.69□□□□□ -0.38
PCDHGC3-207ENST00000622656 VPS37DQ86XT2 251 aa12.69□□□□□ -0.38
PCDHGC3-207ENST00000622656 TMEM57Q8N5G2 664 aa12.69□□□□□ -0.38
PCDHGC3-207ENST00000622656 VEZTQ9HBM0 779 aa12.69□□□□□ -0.38
PCDHGC3-207ENST00000622656 ZNF70Q9UC06 446 aaPredicted RBP12.69□□□□□ -0.38
PCDHGC3-207ENST00000622656 LAMB1P07942 1786 aa12.69□□□□□ -0.38
PCDHGC3-207ENST00000622656 TRPA1O75762 1119 aa12.68□□□□□ -0.38
PCDHGC3-207ENST00000622656 CIAO1O76071 339 aa12.68□□□□□ -0.38
PCDHGC3-207ENST00000622656 IFIT1P09914 478 aaKnown RBP12.68□□□□□ -0.38
PCDHGC3-207ENST00000622656 RLBP1P12271 317 aa12.68□□□□□ -0.38
PCDHGC3-207ENST00000622656 CACNB3P54284 484 aa12.68□□□□□ -0.38
PCDHGC3-207ENST00000622656 RASA3Q14644 834 aa12.68□□□□□ -0.38
PCDHGC3-207ENST00000622656 ATP2B3Q16720 1220 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms