RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 GOLPH3LQ9H4A5 285 aa11.26□□□□□ -0.61
IGHV3-54-201ENST00000622166 NCOA5Q9HCD5 579 aaKnown RBP11.26□□□□□ -0.61
IGHV3-54-201ENST00000622166 TMOD3Q9NYL9 352 aa11.26□□□□□ -0.61
IGHV3-54-201ENST00000622166 RIPOR2Q9Y4F9 1068 aa11.26□□□□□ -0.61
IGHV3-54-201ENST00000622166 MYH3P11055 1940 aa11.26□□□□□ -0.61
IGHV3-54-201ENST00000622166 LRP6O75581 1613 aa11.26□□□□□ -0.61
IGHV3-54-201ENST00000622166 MAP3K15Q6ZN16 1313 aa11.26□□□□□ -0.61
IGHV3-54-201ENST00000622166 ARAP2Q8WZ64 1704 aa11.26□□□□□ -0.61
IGHV3-54-201ENST00000622166 NHSL1Q5SYE7 1610 aa11.25□□□□□ -0.61
IGHV3-54-201ENST00000622166 PRC1O43663 620 aa11.25□□□□□ -0.61
IGHV3-54-201ENST00000622166 DHX16O60231 1041 aaKnown RBP11.25□□□□□ -0.61
IGHV3-54-201ENST00000622166 YEATS4O95619 227 aa11.25□□□□□ -0.61
IGHV3-54-201ENST00000622166 FGAP02671 866 aa11.25□□□□□ -0.61
IGHV3-54-201ENST00000622166 ZAP70P43403 619 aa11.25□□□□□ -0.61
IGHV3-54-201ENST00000622166 IFIT5Q13325 482 aaKnown RBP11.25□□□□□ -0.61
IGHV3-54-201ENST00000622166 HSP90AB3PQ58FF7 597 aa11.25□□□□□ -0.61
IGHV3-54-201ENST00000622166 ZSCAN25Q6NSZ9 544 aa11.25□□□□□ -0.61
IGHV3-54-201ENST00000622166 GIGYF2Q6Y7W6 1299 aaKnown RBP11.25□□□□□ -0.61
IGHV3-54-201ENST00000622166 CCDC186Q7Z3E2 898 aa11.25□□□□□ -0.61
IGHV3-54-201ENST00000622166 DNAJC10Q8IXB1 793 aa11.25□□□□□ -0.61
IGHV3-54-201ENST00000622166 NCOA7Q8NI08 942 aa11.25□□□□□ -0.61
IGHV3-54-201ENST00000622166 MRFAP1L1Q96HT8 127 aa11.25□□□□□ -0.61
IGHV3-54-201ENST00000622166 TRIM5Q9C035 493 aa11.25□□□□□ -0.61
IGHV3-54-201ENST00000622166 HPS5Q9UPZ3 1129 aa11.25□□□□□ -0.61
IGHV3-54-201ENST00000622166 KINO60870 393 aaKnown RBP11.24□□□□□ -0.61
IGHV3-54-201ENST00000622166 ANTXR2P58335 489 aa11.24□□□□□ -0.61
IGHV3-54-201ENST00000622166 FKBP4Q02790 459 aaKnown RBP eCLIP11.24□□□□□ -0.61
IGHV3-54-201ENST00000622166 SCARF1Q14162 830 aa11.24□□□□□ -0.61
IGHV3-54-201ENST00000622166 ATP2B3Q16720 1220 aa11.24□□□□□ -0.61
IGHV3-54-201ENST00000622166 WASHC4Q2M389 1173 aa11.24□□□□□ -0.61
IGHV3-54-201ENST00000622166 ADALQ6DHV7 355 aa11.24□□□□□ -0.61
IGHV3-54-201ENST00000622166 C11orf57Q6ZUT1 292 aaPredicted RBP11.24□□□□□ -0.61
IGHV3-54-201ENST00000622166 BRAPQ7Z569 592 aa11.24□□□□□ -0.61
IGHV3-54-201ENST00000622166 FMR1NBQ8N0W7 255 aaPredicted RBP11.24□□□□□ -0.61
IGHV3-54-201ENST00000622166 FSIP1Q8NA03 581 aa11.24□□□□□ -0.61
IGHV3-54-201ENST00000622166 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.24□□□□□ -0.61
IGHV3-54-201ENST00000622166 ANO10Q9NW15 660 aa11.24□□□□□ -0.61
IGHV3-54-201ENST00000622166 FAM13BQ9NYF5 915 aa11.24□□□□□ -0.61
IGHV3-54-201ENST00000622166 LRP5O75197 1615 aa11.24□□□□□ -0.61
IGHV3-54-201ENST00000622166 KLF18A0A0U1RQI7 1052 aa11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 NEMFO60524 1076 aa11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 STARD3NLO95772 234 aa11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 ADD2P35612 726 aa11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 FOSBP53539 338 aa11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 CEBPZQ03701 1054 aaKnown RBP11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 TTF1Q15361 905 aaPredicted RBP11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 ALX1Q15699 326 aa11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 TAF7LQ5H9L4 462 aa11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 CHST3Q7LGC8 479 aa11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 NLRP10Q86W26 655 aa11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 LINC00301Q8NCQ3 95 aa11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 FBXO18Q8NFZ0 1043 aa11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 TTLL11Q8NHH1 800 aa11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 MRPS27Q92552 414 aaKnown RBP11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 FTOQ9C0B1 505 aaKnown RBP eCLIP11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 GPHNQ9NQX3 736 aaPredicted RBP11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 POLR3EQ9NVU0 708 aa11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 PCDHA7Q9UN72 937 aa11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 NUP98P52948 1817 aa11.23□□□□□ -0.61
IGHV3-54-201ENST00000622166 ANKRD18BA2A2Z9 1011 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 DISP2A7MBM2 1401 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 GOLGA6L19H0YKK7 550 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 ZNF213O14771 459 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 GPAA1O43292 621 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 EVA1CP58658 441 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 UBE3CQ15386 1083 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 METTL24Q5JXM2 366 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 RALYLQ86SE5 291 aaKnown RBP11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 DRC7Q8IY82 874 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 VGLL2Q8N8G2 317 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 KCNG4Q8TDN1 519 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 PIGBQ92521 554 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 DOCK2Q92608 1830 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 FAM89AQ96GI7 184 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 C8orf76Q96K31 380 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 BPIFA3Q9BQP9 254 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 PUS7LQ9H0K6 701 aaKnown RBP11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 SLAIN2Q9P270 581 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 ORC3Q9UBD5 711 aaPredicted RBP11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 NRBP1Q9UHY1 535 aa11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 NAP1L2Q9ULW6 460 aaPredicted RBP11.22□□□□□ -0.61
IGHV3-54-201ENST00000622166 ZMYM6O95789 1325 aa11.21□□□□□ -0.61
IGHV3-54-201ENST00000622166 GOLGA8BA8MQT2 603 aa11.21□□□□□ -0.61
IGHV3-54-201ENST00000622166 UQCRFS1P1P0C7P4 283 aa11.21□□□□□ -0.61
IGHV3-54-201ENST00000622166 ARID4AP29374 1257 aaPredicted RBP11.21□□□□□ -0.61
IGHV3-54-201ENST00000622166 MCAMP43121 646 aa11.21□□□□□ -0.61
IGHV3-54-201ENST00000622166 ME1P48163 572 aa11.21□□□□□ -0.61
IGHV3-54-201ENST00000622166 CTSWP56202 376 aa11.21□□□□□ -0.61
IGHV3-54-201ENST00000622166 HAND2P61296 217 aa11.21□□□□□ -0.61
IGHV3-54-201ENST00000622166 GUCY1B3Q02153 619 aa11.21□□□□□ -0.61
IGHV3-54-201ENST00000622166 CHAF1AQ13111 956 aaPredicted RBP11.21□□□□□ -0.61
IGHV3-54-201ENST00000622166 MYSM1Q5VVJ2 828 aa11.21□□□□□ -0.61
IGHV3-54-201ENST00000622166 DHX40Q8IX18 779 aaKnown RBP11.21□□□□□ -0.61
IGHV3-54-201ENST00000622166 CEP57L1Q8IYX8 460 aa11.21□□□□□ -0.61
IGHV3-54-201ENST00000622166 CLIP2Q9UDT6 1046 aa11.21□□□□□ -0.61
IGHV3-54-201ENST00000622166 ASAP1Q9ULH1 1129 aa11.21□□□□□ -0.61
IGHV3-54-201ENST00000622166 MYO5AQ9Y4I1 1855 aaKnown RBP11.21□□□□□ -0.62
IGHV3-54-201ENST00000622166 ECM29Q5VYK3 1845 aa11.21□□□□□ -0.62
IGHV3-54-201ENST00000622166 STRCQ7RTU9 1775 aa11.21□□□□□ -0.62
IGHV3-54-201ENST00000622166 PLCH1Q4KWH8 1693 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms