RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 SNAP47Q5SQN1 464 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 NBPF6Q5VWK0 638 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 MPRIPQ6WCQ1 1025 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 HFE2Q6ZVN8 426 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 BHMTQ93088 406 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 ABHD17AQ96GS6 310 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 NBPF4Q96M43 638 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 MUC3BQ9H195 1237 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 ZNF576Q9H609 170 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 TLR7Q9NYK1 1049 aaKnown RBP5.55□□□□□ -1.52
LRRC39-204ENST00000620882 LMNB2Q03252 620 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 SPEM2Q0P670 501 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 SEPT6Q14141 434 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 RIPOR1Q6ZS17 1223 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 DHX32Q7L7V1 743 aaKnown RBP5.55□□□□□ -1.52
LRRC39-204ENST00000620882 LILRB2Q8N423 598 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 ASAP3Q8TDY4 903 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 NXPE3Q969Y0 559 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 SRRTQ9BXP5 876 aaKnown RBP5.55□□□□□ -1.52
LRRC39-204ENST00000620882 TRIM55Q9BYV6 548 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 TNKS2Q9H2K2 1166 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 RASSF4Q9H2L5 321 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 C11orf16Q9NQ32 467 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 ST7Q9NRC1 585 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 NDFIP2Q9NV92 336 aa5.55□□□□□ -1.52
LRRC39-204ENST00000620882 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.55□□□□□ -1.52
LRRC39-204ENST00000620882 A0A096LPE4 126 aa5.54□□□□□ -1.52
LRRC39-204ENST00000620882 A0A1W2PPZ6 126 aa5.54□□□□□ -1.52
LRRC39-204ENST00000620882 EFHC2Q5JST6 749 aa5.54□□□□□ -1.52
LRRC39-204ENST00000620882 SLITRK4Q8IW52 837 aa5.54□□□□□ -1.52
LRRC39-204ENST00000620882 TRIM42Q8IWZ5 723 aa5.54□□□□□ -1.52
LRRC39-204ENST00000620882 BHLHE41Q9C0J9 482 aaPredicted RBP5.54□□□□□ -1.52
LRRC39-204ENST00000620882 PPP4R2Q9NY27 417 aa5.54□□□□□ -1.52
LRRC39-204ENST00000620882 PRKAG3Q9UGI9 489 aa5.54□□□□□ -1.52
LRRC39-204ENST00000620882 FAM221AA4D161 298 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 ENPP3O14638 875 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 HSD3B2P26439 372 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 SOX18P35713 384 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 PTPN11Q06124 597 aaPredicted RBP5.53□□□□□ -1.52
LRRC39-204ENST00000620882 DBN1Q16643 649 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 PTPROQ16827 1216 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 SH3TC2Q8TF17 1288 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 CPLX3Q8WVH0 158 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 JARID2Q92833 1246 aaPredicted RBP5.53□□□□□ -1.52
LRRC39-204ENST00000620882 NKD1Q969G9 470 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 FAM187AA6NFU0 413 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 PSAPP07602 524 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.53□□□□□ -1.52
LRRC39-204ENST00000620882 GRIN3AQ8TCU5 1115 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 KCNB2Q92953 911 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 PNMA5Q96PV4 448 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 DNAJC7Q99615 494 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 SIRPGQ9P1W8 387 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 GPN3Q9UHW5 284 aaPredicted RBP5.53□□□□□ -1.52
LRRC39-204ENST00000620882 MSRB2Q9Y3D2 182 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 PCDHGC4Q9Y5F7 938 aa5.53□□□□□ -1.52
LRRC39-204ENST00000620882 BMP6P22004 513 aa5.52□□□□□ -1.53
LRRC39-204ENST00000620882 CDK8P49336 464 aa5.52□□□□□ -1.53
LRRC39-204ENST00000620882 HYAL2Q12891 473 aa5.52□□□□□ -1.53
LRRC39-204ENST00000620882 MKL1Q969V6 931 aa5.52□□□□□ -1.53
LRRC39-204ENST00000620882 POP1Q99575 1024 aaKnown RBP5.52□□□□□ -1.53
LRRC39-204ENST00000620882 STRIP2Q9ULQ0 834 aa5.52□□□□□ -1.53
LRRC39-204ENST00000620882 HOXD8P13378 290 aaPredicted RBP5.51□□□□□ -1.53
LRRC39-204ENST00000620882 PTSQ03393 145 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 PLAURQ03405 335 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 CLCQ05315 142 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 SCARF1Q14162 830 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 RUFY4Q6ZNE9 571 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 GAL3ST3Q96A11 431 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 NUCKS1Q9H1E3 243 aaKnown RBP5.51□□□□□ -1.53
LRRC39-204ENST00000620882 BRMS1Q9HCU9 246 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 FANCLQ9NW38 375 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 IFT57Q9NWB7 429 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 KLHL42Q9P2K6 505 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 ESYT3A0FGR9 886 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 B2RBV5 119 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 PDE2AO00408 941 aaPredicted RBP5.51□□□□□ -1.53
LRRC39-204ENST00000620882 MAP3K6O95382 1288 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 AVPP01185 164 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 RLBP1P12271 317 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 SELPP16109 830 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 MCM4P33991 863 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 ZNF423Q2M1K9 1284 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 FBXW10Q5XX13 1052 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 GK5Q6ZS86 529 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 FILIP1Q7Z7B0 1213 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 RPUSD2Q8IZ73 545 aaKnown RBP5.51□□□□□ -1.53
LRRC39-204ENST00000620882 TMEM102Q8N9M5 508 aaPredicted RBP5.51□□□□□ -1.53
LRRC39-204ENST00000620882 GATAD2BQ8WXI9 593 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 IGFLR1Q9H665 355 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 ANTXR1Q9H6X2 564 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 MARK1Q9P0L2 795 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 PDZRN3Q9UPQ7 1066 aa5.51□□□□□ -1.53
LRRC39-204ENST00000620882 TRIM37O94972 964 aa5.5□□□□□ -1.53
LRRC39-204ENST00000620882 GIPRP48546 466 aa5.5□□□□□ -1.53
LRRC39-204ENST00000620882 SQSTM1Q13501 440 aa5.5□□□□□ -1.53
LRRC39-204ENST00000620882 COL9A2Q14055 689 aaPredicted RBP5.5□□□□□ -1.53
LRRC39-204ENST00000620882 DDR2Q16832 855 aa5.5□□□□□ -1.53
LRRC39-204ENST00000620882 TKFCQ3LXA3 575 aa5.5□□□□□ -1.53
LRRC39-204ENST00000620882 REC114Q7Z4M0 266 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms