RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 RARSP54136 660 aaKnown RBP20.18■□□□□ 0.82
CD40-207ENST00000620709 MOB2Q70IA6 237 aa20.18■□□□□ 0.82
CD40-207ENST00000620709 SSH1Q8WYL5 1049 aa20.17■□□□□ 0.82
CD40-207ENST00000620709 UBE2Q2LH0YL09 131 aa20.17■□□□□ 0.82
CD40-207ENST00000620709 PUS3Q9BZE2 481 aaKnown RBP20.17■□□□□ 0.82
CD40-207ENST00000620709 BICC1Q9H694 974 aaKnown RBP20.17■□□□□ 0.82
CD40-207ENST00000620709 PTPRCP08575 1304 aa20.16■□□□□ 0.82
CD40-207ENST00000620709 IRS2Q9Y4H2 1338 aa20.16■□□□□ 0.82
CD40-207ENST00000620709 BCAR3O75815 825 aa20.16■□□□□ 0.82
CD40-207ENST00000620709 SLC10A3P09131 477 aa20.16■□□□□ 0.82
CD40-207ENST00000620709 NF2P35240 595 aa20.16■□□□□ 0.82
CD40-207ENST00000620709 PRKG1Q13976 671 aa20.16■□□□□ 0.82
CD40-207ENST00000620709 DLGAP5Q15398 846 aa20.16■□□□□ 0.82
CD40-207ENST00000620709 C15orf52Q6ZUT6 534 aaKnown RBP20.16■□□□□ 0.82
CD40-207ENST00000620709 CERS5Q8N5B7 392 aa20.16■□□□□ 0.82
CD40-207ENST00000620709 KAZALD1Q96I82 304 aa20.16■□□□□ 0.82
CD40-207ENST00000620709 MMP14P50281 582 aa20.15■□□□□ 0.82
CD40-207ENST00000620709 ABHD8Q96I13 439 aa20.15■□□□□ 0.82
CD40-207ENST00000620709 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.15■□□□□ 0.82
CD40-207ENST00000620709 CASP8AP2Q9UKL3 1982 aa20.15■□□□□ 0.82
CD40-207ENST00000620709 IL1R1P14778 569 aa20.14■□□□□ 0.81
CD40-207ENST00000620709 FKBP1BP68106 108 aa20.14■□□□□ 0.81
CD40-207ENST00000620709 RASAL3Q86YV0 1011 aa20.14■□□□□ 0.81
CD40-207ENST00000620709 APOBEC3FQ8IUX4 373 aaKnown RBP20.14■□□□□ 0.81
CD40-207ENST00000620709 SMC4Q9NTJ3 1288 aa20.14■□□□□ 0.81
CD40-207ENST00000620709 PAPPA2Q9BXP8 1791 aa20.14■□□□□ 0.81
CD40-207ENST00000620709 GYG1P46976 350 aa20.13■□□□□ 0.81
CD40-207ENST00000620709 RBM5P52756 815 aaKnown RBP eCLIP20.13■□□□□ 0.81
CD40-207ENST00000620709 PCDHAC2Q9Y5I4 1007 aa20.13■□□□□ 0.81
CD40-207ENST00000620709 TRPA1O75762 1119 aa20.12■□□□□ 0.81
CD40-207ENST00000620709 UTYO14607 1347 aa20.12■□□□□ 0.81
CD40-207ENST00000620709 HIBADHP31937 336 aaKnown RBP20.12■□□□□ 0.81
CD40-207ENST00000620709 UBE4AQ14139 1066 aa20.12■□□□□ 0.81
CD40-207ENST00000620709 ALDH1L2Q3SY69 923 aa20.12■□□□□ 0.81
CD40-207ENST00000620709 CFAP100Q494V2 611 aa20.12■□□□□ 0.81
CD40-207ENST00000620709 METTL24Q5JXM2 366 aa20.12■□□□□ 0.81
CD40-207ENST00000620709 CSRNP1Q96S65 589 aa20.12■□□□□ 0.81
CD40-207ENST00000620709 MROH5Q6ZUA9 1318 aa20.11■□□□□ 0.81
CD40-207ENST00000620709 CLRN2A0PK11 232 aa20.11■□□□□ 0.81
CD40-207ENST00000620709 CCDC85CA6NKD9 419 aa20.11■□□□□ 0.81
CD40-207ENST00000620709 MKRN3Q13064 507 aaKnown RBP20.11■□□□□ 0.81
CD40-207ENST00000620709 LRRC24Q50LG9 513 aa20.11■□□□□ 0.81
CD40-207ENST00000620709 VPS37DQ86XT2 251 aa20.11■□□□□ 0.81
CD40-207ENST00000620709 ANKRD44Q8N8A2 993 aa20.11■□□□□ 0.81
CD40-207ENST00000620709 VEZTQ9HBM0 779 aa20.11■□□□□ 0.81
CD40-207ENST00000620709 RNF186Q9NXI6 227 aa20.11■□□□□ 0.81
CD40-207ENST00000620709 AKAP11Q9UKA4 1901 aa20.1■□□□□ 0.81
CD40-207ENST00000620709 MYO1BO43795 1136 aa20.1■□□□□ 0.81
CD40-207ENST00000620709 ARMC9Q7Z3E5 817 aa20.1■□□□□ 0.81
CD40-207ENST00000620709 KLHDC4Q8TBB5 520 aa20.1■□□□□ 0.81
CD40-207ENST00000620709 ZBED3Q96IU2 234 aaPredicted RBP20.1■□□□□ 0.81
CD40-207ENST00000620709 PPP4R2Q9NY27 417 aa20.1■□□□□ 0.81
CD40-207ENST00000620709 IQSEC3Q9UPP2 1182 aaPredicted RBP20.1■□□□□ 0.81
CD40-207ENST00000620709 RIPOR2Q9Y4F9 1068 aa20.1■□□□□ 0.81
CD40-207ENST00000620709 DGKZQ13574 1117 aa20.09■□□□□ 0.81
CD40-207ENST00000620709 RABL6Q3YEC7 729 aaPredicted RBP20.09■□□□□ 0.81
CD40-207ENST00000620709 FAM84BQ96KN1 310 aaPredicted RBP20.09■□□□□ 0.81
CD40-207ENST00000620709 USP44Q9H0E7 712 aa20.09■□□□□ 0.81
CD40-207ENST00000620709 DEFB129Q9H1M3 183 aa20.09■□□□□ 0.81
CD40-207ENST00000620709 FZD1Q9UP38 647 aa20.09■□□□□ 0.81
CD40-207ENST00000620709 FRAT2O75474 233 aaPredicted RBP20.08■□□□□ 0.81
CD40-207ENST00000620709 FKBP1AP62942 108 aaKnown RBP20.08■□□□□ 0.81
CD40-207ENST00000620709 MFSD14BQ5SR56 506 aa20.08■□□□□ 0.81
CD40-207ENST00000620709 PRMT6Q96LA8 375 aaPredicted RBP20.08■□□□□ 0.81
CD40-207ENST00000620709 SAGE1Q9NXZ1 904 aa20.08■□□□□ 0.81
CD40-207ENST00000620709 ANGEL1Q9UNK9 670 aaKnown RBP20.08■□□□□ 0.81
CD40-207ENST00000620709 CHAF1AQ13111 956 aaPredicted RBP20.07■□□□□ 0.8
CD40-207ENST00000620709 TDRD7Q8NHU6 1098 aaKnown RBP20.07■□□□□ 0.8
CD40-207ENST00000620709 MCOLN1Q9GZU1 580 aa20.07■□□□□ 0.8
CD40-207ENST00000620709 TTF2Q9UNY4 1162 aaKnown RBP20.07■□□□□ 0.8
CD40-207ENST00000620709 KIF16BQ96L93 1317 aa20.07■□□□□ 0.8
CD40-207ENST00000620709 SPDYE2BA6NHP3 402 aa20.07■□□□□ 0.8
CD40-207ENST00000620709 SPDYE6P0CI01 402 aa20.07■□□□□ 0.8
CD40-207ENST00000620709 PTPN12Q05209 780 aaKnown RBP20.07■□□□□ 0.8
CD40-207ENST00000620709 PDE3AQ14432 1141 aa20.07■□□□□ 0.8
CD40-207ENST00000620709 MTMR14Q8NCE2 650 aa20.07■□□□□ 0.8
CD40-207ENST00000620709 FRAT1Q92837 279 aaPredicted RBP20.07■□□□□ 0.8
CD40-207ENST00000620709 NOB1Q9ULX3 412 aaKnown RBP20.07■□□□□ 0.8
CD40-207ENST00000620709 FAM205AQ6ZU69 1335 aa20.06■□□□□ 0.8
CD40-207ENST00000620709 CAVIN4Q5BKX8 364 aa20.06■□□□□ 0.8
CD40-207ENST00000620709 C20orf194Q5TEA3 1177 aa20.06■□□□□ 0.8
CD40-207ENST00000620709 REM2Q8IYK8 340 aaPredicted RBP20.06■□□□□ 0.8
CD40-207ENST00000620709 EXOC6Q8TAG9 804 aa20.05■□□□□ 0.8
CD40-207ENST00000620709 AOX1Q06278 1338 aa20.05■□□□□ 0.8
CD40-207ENST00000620709 ECM29Q5VYK3 1845 aa20.05■□□□□ 0.8
CD40-207ENST00000620709 PDE8BO95263 885 aa20.04■□□□□ 0.8
CD40-207ENST00000620709 ZKSCAN2Q63HK3 967 aa20.04■□□□□ 0.8
CD40-207ENST00000620709 CRBNQ96SW2 442 aa20.04■□□□□ 0.8
CD40-207ENST00000620709 COL1A1P02452 1464 aaPredicted RBP20.03■□□□□ 0.8
CD40-207ENST00000620709 UBTFL1P0CB47 393 aaPredicted RBP20.03■□□□□ 0.8
CD40-207ENST00000620709 MS4A1P11836 297 aa20.03■□□□□ 0.8
CD40-207ENST00000620709 BCAMP50895 628 aa20.02■□□□□ 0.8
CD40-207ENST00000620709 FBXO33Q7Z6M2 555 aa20.02■□□□□ 0.8
CD40-207ENST00000620709 TDRD3Q9H7E2 651 aaKnown RBP20.02■□□□□ 0.8
CD40-207ENST00000620709 PPP2R3BQ9Y5P8 575 aa20.02■□□□□ 0.8
CD40-207ENST00000620709 IPO8O15397 1037 aaKnown RBP20.02■□□□□ 0.79
CD40-207ENST00000620709 PPP1R12BO60237 982 aaPredicted RBP20.02■□□□□ 0.79
CD40-207ENST00000620709 TBC1D8O95759 1140 aa20.02■□□□□ 0.79
CD40-207ENST00000620709 RASA3Q14644 834 aa20.02■□□□□ 0.79
CD40-207ENST00000620709 SUPT20HL1Q3ZLR7 823 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms