RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 GNB5O14775 395 aa5.91□□□□□ -1.46
MALAT1-216ENST00000620465 RECKO95980 971 aa5.91□□□□□ -1.46
MALAT1-216ENST00000620465 EPHA1P21709 976 aa5.91□□□□□ -1.46
MALAT1-216ENST00000620465 BAG6P46379 1132 aa5.91□□□□□ -1.46
MALAT1-216ENST00000620465 RPS26P11Q5JNZ5 115 aaPredicted RBP5.91□□□□□ -1.46
MALAT1-216ENST00000620465 FAM117BQ6P1L5 589 aa5.91□□□□□ -1.46
MALAT1-216ENST00000620465 VN1R5Q7Z5H4 357 aa5.91□□□□□ -1.46
MALAT1-216ENST00000620465 CLEC4MQ9H2X3 399 aaPredicted RBP5.91□□□□□ -1.46
MALAT1-216ENST00000620465 SH2B1Q9NRF2 756 aaPredicted RBP5.91□□□□□ -1.46
MALAT1-216ENST00000620465 MKL2Q9ULH7 1088 aa5.91□□□□□ -1.46
MALAT1-216ENST00000620465 PPME1Q9Y570 386 aa5.91□□□□□ -1.46
MALAT1-216ENST00000620465 SPDYE3A6NKU9 549 aa5.9□□□□□ -1.46
MALAT1-216ENST00000620465 E9PSI1 815 aa5.9□□□□□ -1.46
MALAT1-216ENST00000620465 CTSHP09668 335 aa5.9□□□□□ -1.46
MALAT1-216ENST00000620465 SNRPNP63162 240 aaKnown RBP5.9□□□□□ -1.46
MALAT1-216ENST00000620465 PCDH1Q08174 1060 aa5.9□□□□□ -1.46
MALAT1-216ENST00000620465 COL9A3Q14050 684 aaPredicted RBP5.9□□□□□ -1.46
MALAT1-216ENST00000620465 IKBKEQ14164 716 aa5.9□□□□□ -1.46
MALAT1-216ENST00000620465 TSNAXIP1Q2TAA8 658 aa5.9□□□□□ -1.46
MALAT1-216ENST00000620465 SRA1Q9HD15 236 aaKnown RBP5.9□□□□□ -1.46
MALAT1-216ENST00000620465 TTF2Q9UNY4 1162 aaKnown RBP5.9□□□□□ -1.46
MALAT1-216ENST00000620465 AKAP2Q9Y2D5 859 aa5.9□□□□□ -1.46
MALAT1-216ENST00000620465 CDC25BP30305 580 aa5.89□□□□□ -1.47
MALAT1-216ENST00000620465 PIP4K2BP78356 416 aa5.89□□□□□ -1.47
MALAT1-216ENST00000620465 LINC00114Q6XXX2 140 aa5.89□□□□□ -1.47
MALAT1-216ENST00000620465 NPM2Q86SE8 214 aaKnown RBP5.89□□□□□ -1.47
MALAT1-216ENST00000620465 MAP4K3Q8IVH8 894 aa5.89□□□□□ -1.47
MALAT1-216ENST00000620465 DTWD1Q8N5C7 304 aa5.89□□□□□ -1.47
MALAT1-216ENST00000620465 ANKRD24Q8TF21 1146 aa5.89□□□□□ -1.47
MALAT1-216ENST00000620465 WNT8BQ93098 351 aa5.89□□□□□ -1.47
MALAT1-216ENST00000620465 CEP44Q9C0F1 390 aa5.89□□□□□ -1.47
MALAT1-216ENST00000620465 NOP53Q9NZM5 478 aaKnown RBP5.89□□□□□ -1.47
MALAT1-216ENST00000620465 ADAMTS8Q9UP79 889 aa5.89□□□□□ -1.47
MALAT1-216ENST00000620465 FAM181BA6NEQ2 426 aa5.88□□□□□ -1.47
MALAT1-216ENST00000620465 LINC01387J3KSC0 135 aa5.88□□□□□ -1.47
MALAT1-216ENST00000620465 B3GALT4O96024 378 aa5.88□□□□□ -1.47
MALAT1-216ENST00000620465 ESRRAP11474 423 aaPredicted RBP5.88□□□□□ -1.47
MALAT1-216ENST00000620465 ST13P50502 369 aaKnown RBP5.88□□□□□ -1.47
MALAT1-216ENST00000620465 RAC1P63000 192 aa5.88□□□□□ -1.47
MALAT1-216ENST00000620465 TAF1CQ15572 869 aaPredicted RBP5.88□□□□□ -1.47
MALAT1-216ENST00000620465 TRAPPC3LQ5T215 181 aa5.88□□□□□ -1.47
MALAT1-216ENST00000620465 MEI1Q5TIA1 1274 aa5.88□□□□□ -1.47
MALAT1-216ENST00000620465 TXNDC11Q6PKC3 985 aa5.88□□□□□ -1.47
MALAT1-216ENST00000620465 DMRTC2Q8IXT2 367 aaPredicted RBP5.88□□□□□ -1.47
MALAT1-216ENST00000620465 DCAF11Q8TEB1 546 aa5.88□□□□□ -1.47
MALAT1-216ENST00000620465 TRIM11Q96F44 468 aa5.88□□□□□ -1.47
MALAT1-216ENST00000620465 BACH2Q9BYV9 841 aa5.88□□□□□ -1.47
MALAT1-216ENST00000620465 SOX17Q9H6I2 414 aaPredicted RBP5.88□□□□□ -1.47
MALAT1-216ENST00000620465 FSCN2O14926 492 aa5.87□□□□□ -1.47
MALAT1-216ENST00000620465 EIF4EBP3O60516 100 aaPredicted RBP5.87□□□□□ -1.47
MALAT1-216ENST00000620465 ARL4DP49703 201 aa5.87□□□□□ -1.47
MALAT1-216ENST00000620465 FAAP100Q0VG06 881 aa5.87□□□□□ -1.47
MALAT1-216ENST00000620465 TPTE2Q6XPS3 522 aa5.87□□□□□ -1.47
MALAT1-216ENST00000620465 ILDR2Q71H61 639 aa5.87□□□□□ -1.47
MALAT1-216ENST00000620465 BEND7Q8N7W2 519 aaPredicted RBP5.87□□□□□ -1.47
MALAT1-216ENST00000620465 TMEM87AQ8NBN3 555 aa5.87□□□□□ -1.47
MALAT1-216ENST00000620465 DDX54Q8TDD1 881 aaKnown RBP5.87□□□□□ -1.47
MALAT1-216ENST00000620465 SLC7A3Q8WY07 619 aa5.87□□□□□ -1.47
MALAT1-216ENST00000620465 SCARF2Q96GP6 870 aaPredicted RBP5.87□□□□□ -1.47
MALAT1-216ENST00000620465 PLVAPQ9BX97 442 aa5.87□□□□□ -1.47
MALAT1-216ENST00000620465 TMEM39AQ9NV64 488 aa5.87□□□□□ -1.47
MALAT1-216ENST00000620465 GPN3Q9UHW5 284 aaPredicted RBP5.87□□□□□ -1.47
MALAT1-216ENST00000620465 USP31Q70CQ4 1352 aa5.86□□□□□ -1.47
MALAT1-216ENST00000620465 A0A0A0MRY4 1105 aa5.86□□□□□ -1.47
MALAT1-216ENST00000620465 SCAMP3O14828 347 aaKnown RBP5.86□□□□□ -1.47
MALAT1-216ENST00000620465 FBXO24O75426 580 aa5.86□□□□□ -1.47
MALAT1-216ENST00000620465 PPP2R3AQ06190 1150 aa5.86□□□□□ -1.47
MALAT1-216ENST00000620465 C19orf57Q0VDD7 668 aa5.86□□□□□ -1.47
MALAT1-216ENST00000620465 SETDB1Q15047 1291 aa5.86□□□□□ -1.47
MALAT1-216ENST00000620465 CCDC85BQ15834 202 aaPredicted RBP5.86□□□□□ -1.47
MALAT1-216ENST00000620465 ZNF423Q2M1K9 1284 aa5.86□□□□□ -1.47
MALAT1-216ENST00000620465 SV2BQ7L1I2 683 aa5.86□□□□□ -1.47
MALAT1-216ENST00000620465 KLHL23Q8NBE8 558 aa5.86□□□□□ -1.47
MALAT1-216ENST00000620465 CARD10Q9BWT7 1032 aa5.86□□□□□ -1.47
MALAT1-216ENST00000620465 OSGEPQ9NPF4 335 aa5.86□□□□□ -1.47
MALAT1-216ENST00000620465 SEC31BQ9NQW1 1179 aa5.86□□□□□ -1.47
MALAT1-216ENST00000620465 SOX1O00570 391 aaPredicted RBP5.85□□□□□ -1.47
MALAT1-216ENST00000620465 PRRT3Q5FWE3 981 aa5.85□□□□□ -1.47
MALAT1-216ENST00000620465 LDLRAD1Q5T700 205 aa5.85□□□□□ -1.47
MALAT1-216ENST00000620465 FMR1NBQ8N0W7 255 aaPredicted RBP5.85□□□□□ -1.47
MALAT1-216ENST00000620465 NOC4LQ9BVI4 516 aaKnown RBP5.85□□□□□ -1.47
MALAT1-216ENST00000620465 METTL5Q9NRN9 209 aaKnown RBP5.85□□□□□ -1.47
MALAT1-216ENST00000620465 CNTNAP5Q8WYK1 1306 aa5.84□□□□□ -1.47
MALAT1-216ENST00000620465 RNF225M0QZC1 329 aaPredicted RBP5.84□□□□□ -1.47
MALAT1-216ENST00000620465 ENC1O14682 589 aa5.84□□□□□ -1.47
MALAT1-216ENST00000620465 DEAF1O75398 565 aaPredicted RBP5.84□□□□□ -1.47
MALAT1-216ENST00000620465 ELNP15502 786 aa5.84□□□□□ -1.47
MALAT1-216ENST00000620465 ZNF76P36508 570 aa5.84□□□□□ -1.47
MALAT1-216ENST00000620465 FANCCQ00597 558 aa5.84□□□□□ -1.47
MALAT1-216ENST00000620465 TRIM28Q13263 835 aaKnown RBP5.84□□□□□ -1.47
MALAT1-216ENST00000620465 AP3B2Q13367 1082 aa5.84□□□□□ -1.47
MALAT1-216ENST00000620465 FBXO11Q86XK2 927 aa5.84□□□□□ -1.47
MALAT1-216ENST00000620465 NECAB3Q96P71 396 aaPredicted RBP5.84□□□□□ -1.47
MALAT1-216ENST00000620465 STK17AQ9UEE5 414 aa5.84□□□□□ -1.47
MALAT1-216ENST00000620465 SAMM50Q9Y512 469 aa5.84□□□□□ -1.47
MALAT1-216ENST00000620465 CELA3AP09093 270 aa5.83□□□□□ -1.48
MALAT1-216ENST00000620465 SPATA31C1P0DKV0 1188 aa5.83□□□□□ -1.48
MALAT1-216ENST00000620465 RLBP1P12271 317 aa5.83□□□□□ -1.48
MALAT1-216ENST00000620465 TCF3P15923 654 aa5.83□□□□□ -1.48
MALAT1-216ENST00000620465 CD68P34810 354 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms