RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 CTDNEP1O95476 244 aa23.46■■□□□ 1.35
PCDHA13-203ENST00000617769 HMGB1P09429 215 aaKnown RBP23.46■■□□□ 1.35
PCDHA13-203ENST00000617769 HMGN5P82970 282 aaKnown RBP23.46■■□□□ 1.35
PCDHA13-203ENST00000617769 CCDC158Q5M9N0 1113 aa23.46■■□□□ 1.35
PCDHA13-203ENST00000617769 CDCA7Q9BWT1 371 aaPredicted RBP23.46■■□□□ 1.35
PCDHA13-203ENST00000617769 HELLSQ9NRZ9 838 aa23.46■■□□□ 1.35
PCDHA13-203ENST00000617769 CFAP45Q9UL16 551 aa23.46■■□□□ 1.35
PCDHA13-203ENST00000617769 THRAP3Q9Y2W1 955 aaKnown RBP23.46■■□□□ 1.35
PCDHA13-203ENST00000617769 RIPOR2Q9Y4F9 1068 aa23.46■■□□□ 1.35
PCDHA13-203ENST00000617769 CDHR2Q9BYE9 1310 aa23.46■■□□□ 1.35
PCDHA13-203ENST00000617769 FAM98CQ17RN3 349 aaKnown RBP23.45■■□□□ 1.35
PCDHA13-203ENST00000617769 FTOQ9C0B1 505 aaKnown RBP eCLIP23.45■■□□□ 1.35
PCDHA13-203ENST00000617769 DNAJC25Q9H1X3 360 aa23.45■■□□□ 1.35
PCDHA13-203ENST00000617769 EIF5P55010 431 aaKnown RBP23.45■■□□□ 1.34
PCDHA13-203ENST00000617769 CCT2P78371 535 aaKnown RBP23.45■■□□□ 1.34
PCDHA13-203ENST00000617769 LLPHQ9BRT6 129 aaKnown RBP23.45■■□□□ 1.34
PCDHA13-203ENST00000617769 DSCC1Q9BVC3 393 aa23.45■■□□□ 1.34
PCDHA13-203ENST00000617769 AKAP2Q9Y2D5 859 aa23.45■■□□□ 1.34
PCDHA13-203ENST00000617769 ANKRD18BA2A2Z9 1011 aa23.44■■□□□ 1.34
PCDHA13-203ENST00000617769 ADD1P35611 737 aaKnown RBP23.44■■□□□ 1.34
PCDHA13-203ENST00000617769 ZNF165P49910 485 aa23.44■■□□□ 1.34
PCDHA13-203ENST00000617769 SUSD4Q5VX71 490 aa23.44■■□□□ 1.34
PCDHA13-203ENST00000617769 HELBQ8NG08 1087 aaPredicted RBP23.44■■□□□ 1.34
PCDHA13-203ENST00000617769 CCDC87Q9NVE4 849 aa23.44■■□□□ 1.34
PCDHA13-203ENST00000617769 PTPDC1A2A3K4 754 aa23.44■■□□□ 1.34
PCDHA13-203ENST00000617769 M0R2C6 588 aa23.44■■□□□ 1.34
PCDHA13-203ENST00000617769 HSPD1P10809 573 aaKnown RBP23.44■■□□□ 1.34
PCDHA13-203ENST00000617769 ZAP70P43403 619 aa23.44■■□□□ 1.34
PCDHA13-203ENST00000617769 EXOSC10Q01780 885 aaKnown RBP23.44■■□□□ 1.34
PCDHA13-203ENST00000617769 ZMYM1Q5SVZ6 1142 aa23.44■■□□□ 1.34
PCDHA13-203ENST00000617769 ZNF34Q8IZ26 560 aa23.44■■□□□ 1.34
PCDHA13-203ENST00000617769 ARID3AQ99856 593 aa23.44■■□□□ 1.34
PCDHA13-203ENST00000617769 NCOA5Q9HCD5 579 aaKnown RBP23.44■■□□□ 1.34
PCDHA13-203ENST00000617769 ATP2B3Q16720 1220 aa23.43■■□□□ 1.34
PCDHA13-203ENST00000617769 CHST3Q7LGC8 479 aa23.43■■□□□ 1.34
PCDHA13-203ENST00000617769 NAP1L2Q9ULW6 460 aaPredicted RBP23.43■■□□□ 1.34
PCDHA13-203ENST00000617769 WNK3Q9BYP7 1800 aa23.43■■□□□ 1.34
PCDHA13-203ENST00000617769 MAST3O60307 1309 aa23.43■■□□□ 1.34
PCDHA13-203ENST00000617769 ERVV-1B6SEH8 477 aa23.43■■□□□ 1.34
PCDHA13-203ENST00000617769 E7EWF7 191 aa23.43■■□□□ 1.34
PCDHA13-203ENST00000617769 RNF113AO15541 343 aaKnown RBP23.43■■□□□ 1.34
PCDHA13-203ENST00000617769 OSBP2Q969R2 916 aa23.43■■□□□ 1.34
PCDHA13-203ENST00000617769 C8orf37Q96NL8 207 aa23.43■■□□□ 1.34
PCDHA13-203ENST00000617769 TRIM5Q9C035 493 aa23.43■■□□□ 1.34
PCDHA13-203ENST00000617769 RIC1Q4ADV7 1423 aa23.43■■□□□ 1.34
PCDHA13-203ENST00000617769 SMIM5Q71RC9 77 aa23.42■■□□□ 1.34
PCDHA13-203ENST00000617769 CCDC186Q7Z3E2 898 aa23.42■■□□□ 1.34
PCDHA13-203ENST00000617769 DRC7Q8IY82 874 aa23.42■■□□□ 1.34
PCDHA13-203ENST00000617769 NRBP1Q9UHY1 535 aa23.42■■□□□ 1.34
PCDHA13-203ENST00000617769 SLIT2O94813 1529 aa23.42■■□□□ 1.34
PCDHA13-203ENST00000617769 SNAP23O00161 211 aa23.42■■□□□ 1.34
PCDHA13-203ENST00000617769 PDE8AO60658 829 aa23.42■■□□□ 1.34
PCDHA13-203ENST00000617769 NAA16Q6N069 864 aaPredicted RBP23.42■■□□□ 1.34
PCDHA13-203ENST00000617769 TDRD7Q8NHU6 1098 aaKnown RBP23.42■■□□□ 1.34
PCDHA13-203ENST00000617769 NRAPQ86VF7 1730 aa23.41■■□□□ 1.34
PCDHA13-203ENST00000617769 NUP98P52948 1817 aa23.41■■□□□ 1.34
PCDHA13-203ENST00000617769 GTF2F1P35269 517 aaKnown RBP eCLIP23.41■■□□□ 1.34
PCDHA13-203ENST00000617769 AGXT2Q9BYV1 514 aa23.41■■□□□ 1.34
PCDHA13-203ENST00000617769 TOM1O60784 492 aa23.41■■□□□ 1.34
PCDHA13-203ENST00000617769 WASHC4Q2M389 1173 aa23.41■■□□□ 1.34
PCDHA13-203ENST00000617769 TTLL5Q6EMB2 1281 aa23.41■■□□□ 1.34
PCDHA13-203ENST00000617769 PTF1AQ7RTS3 328 aa23.41■■□□□ 1.34
PCDHA13-203ENST00000617769 MTERF4Q7Z6M4 381 aaKnown RBP23.41■■□□□ 1.34
PCDHA13-203ENST00000617769 PLA2G4DQ86XP0 818 aa23.41■■□□□ 1.34
PCDHA13-203ENST00000617769 ZNF75DP51815 510 aa23.4■■□□□ 1.34
PCDHA13-203ENST00000617769 FBXO3Q9UK99 471 aa23.4■■□□□ 1.34
PCDHA13-203ENST00000617769 LRMPQ12912 555 aa23.4■■□□□ 1.34
PCDHA13-203ENST00000617769 USP28Q96RU2 1077 aa23.4■■□□□ 1.34
PCDHA13-203ENST00000617769 RCOR1Q9UKL0 485 aa23.4■■□□□ 1.34
PCDHA13-203ENST00000617769 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.39■■□□□ 1.34
PCDHA13-203ENST00000617769 GUCY1B3Q02153 619 aa23.39■■□□□ 1.34
PCDHA13-203ENST00000617769 SEC31BQ9NQW1 1179 aa23.39■■□□□ 1.34
PCDHA13-203ENST00000617769 MCAMP43121 646 aa23.39■■□□□ 1.33
PCDHA13-203ENST00000617769 CCAR1Q8IX12 1150 aaKnown RBP23.39■■□□□ 1.33
PCDHA13-203ENST00000617769 PDIA3P30101 505 aaKnown RBP23.38■■□□□ 1.33
PCDHA13-203ENST00000617769 NGLY1Q96IV0 654 aa23.38■■□□□ 1.33
PCDHA13-203ENST00000617769 GOLPH3LQ9H4A5 285 aa23.38■■□□□ 1.33
PCDHA13-203ENST00000617769 CAMTA2O94983 1202 aa23.38■■□□□ 1.33
PCDHA13-203ENST00000617769 ZNF710Q8N1W2 664 aa23.38■■□□□ 1.33
PCDHA13-203ENST00000617769 VGLL2Q8N8G2 317 aa23.38■■□□□ 1.33
PCDHA13-203ENST00000617769 KIF3AQ9Y496 699 aa23.38■■□□□ 1.33
PCDHA13-203ENST00000617769 SALL1Q9NSC2 1324 aa23.37■■□□□ 1.33
PCDHA13-203ENST00000617769 BARGINQ6ZT62 677 aa23.37■■□□□ 1.33
PCDHA13-203ENST00000617769 MYH15Q9Y2K3 1946 aa23.37■■□□□ 1.33
PCDHA13-203ENST00000617769 UBAP1LF5GYI3 381 aa23.37■■□□□ 1.33
PCDHA13-203ENST00000617769 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.37■■□□□ 1.33
PCDHA13-203ENST00000617769 PUS7LQ9H0K6 701 aaKnown RBP23.37■■□□□ 1.33
PCDHA13-203ENST00000617769 NIP7Q9Y221 180 aaKnown RBP eCLIP23.37■■□□□ 1.33
PCDHA13-203ENST00000617769 PDE8BO95263 885 aa23.36■■□□□ 1.33
PCDHA13-203ENST00000617769 SNW1Q13573 536 aaKnown RBP23.36■■□□□ 1.33
PCDHA13-203ENST00000617769 FAM182BQ5T319 152 aa23.36■■□□□ 1.33
PCDHA13-203ENST00000617769 C11orf57Q6ZUT1 292 aaPredicted RBP23.36■■□□□ 1.33
PCDHA13-203ENST00000617769 ILDR1Q86SU0 546 aaPredicted RBP23.35■■□□□ 1.33
PCDHA13-203ENST00000617769 ZNF274Q96GC6 653 aaPredicted RBP23.35■■□□□ 1.33
PCDHA13-203ENST00000617769 GPHNQ9NQX3 736 aaPredicted RBP23.35■■□□□ 1.33
PCDHA13-203ENST00000617769 ANKRD36CQ5JPF3 1778 aa23.35■■□□□ 1.33
PCDHA13-203ENST00000617769 PHKA1P46020 1223 aa23.35■■□□□ 1.33
PCDHA13-203ENST00000617769 HAND2P61296 217 aa23.35■■□□□ 1.33
PCDHA13-203ENST00000617769 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.35■■□□□ 1.33
PCDHA13-203ENST00000617769 UTP14AQ9BVJ6 771 aaKnown RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms