RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 TTLL6Q8N841 843 aa14.18□□□□□ -0.14
PDPN-211ENST00000617617 TMX4Q9H1E5 349 aaPredicted RBP14.18□□□□□ -0.14
PDPN-211ENST00000617617 CHRNA5P30532 468 aa14.18□□□□□ -0.14
PDPN-211ENST00000617617 SUPT20HQ8NEM7 779 aa14.18□□□□□ -0.14
PDPN-211ENST00000617617 ZNF622Q969S3 477 aaKnown RBP eCLIP14.18□□□□□ -0.14
PDPN-211ENST00000617617 EYA3Q99504 573 aa14.18□□□□□ -0.14
PDPN-211ENST00000617617 BCL11AQ9H165 835 aa14.18□□□□□ -0.14
PDPN-211ENST00000617617 FAM205AQ6ZU69 1335 aa14.18□□□□□ -0.14
PDPN-211ENST00000617617 MYH2Q9UKX2 1941 aa14.18□□□□□ -0.14
PDPN-211ENST00000617617 KLRK1P26718 216 aa14.17□□□□□ -0.14
PDPN-211ENST00000617617 ADD2P35612 726 aa14.17□□□□□ -0.14
PDPN-211ENST00000617617 NMIQ13287 307 aaPredicted RBP14.17□□□□□ -0.14
PDPN-211ENST00000617617 KCNB2Q92953 911 aa14.17□□□□□ -0.14
PDPN-211ENST00000617617 PSMD1Q99460 953 aa14.17□□□□□ -0.14
PDPN-211ENST00000617617 C22orf23Q9BZE7 217 aa14.17□□□□□ -0.14
PDPN-211ENST00000617617 COA1Q9GZY4 146 aa14.17□□□□□ -0.14
PDPN-211ENST00000617617 LSG1Q9H089 658 aaKnown RBP14.17□□□□□ -0.14
PDPN-211ENST00000617617 ANTXR1Q9H6X2 564 aa14.17□□□□□ -0.14
PDPN-211ENST00000617617 ECM29Q5VYK3 1845 aa14.17□□□□□ -0.14
PDPN-211ENST00000617617 TCRBV5S4A2TA0A5A2 114 aa14.17□□□□□ -0.14
PDPN-211ENST00000617617 WTIPA6NIX2 430 aaPredicted RBP14.17□□□□□ -0.14
PDPN-211ENST00000617617 FKBP4Q02790 459 aaKnown RBP eCLIP14.17□□□□□ -0.14
PDPN-211ENST00000617617 MCMDC2Q4G0Z9 681 aa14.17□□□□□ -0.14
PDPN-211ENST00000617617 EDC3Q96F86 508 aaKnown RBP14.17□□□□□ -0.14
PDPN-211ENST00000617617 PIH1D3Q9NQM4 214 aaKnown RBP14.17□□□□□ -0.14
PDPN-211ENST00000617617 NSFL1CQ9UNZ2 370 aaKnown RBP14.17□□□□□ -0.14
PDPN-211ENST00000617617 SCN9AQ15858 1988 aa14.16□□□□□ -0.14
PDPN-211ENST00000617617 DPEP1P16444 411 aa14.16□□□□□ -0.14
PDPN-211ENST00000617617 MFAP1P55081 439 aaKnown RBP14.16□□□□□ -0.14
PDPN-211ENST00000617617 ZGPATQ8N5A5 531 aaKnown RBP14.16□□□□□ -0.14
PDPN-211ENST00000617617 LAMB1P07942 1786 aa14.16□□□□□ -0.14
PDPN-211ENST00000617617 DPP8Q6V1X1 898 aaPredicted RBP14.16□□□□□ -0.14
PDPN-211ENST00000617617 TXNRD3Q86VQ6 643 aa14.16□□□□□ -0.14
PDPN-211ENST00000617617 RTKN2Q8IZC4 609 aa14.16□□□□□ -0.14
PDPN-211ENST00000617617 APPBP2Q92624 585 aa14.16□□□□□ -0.14
PDPN-211ENST00000617617 A0A0D9SFI3 127 aa14.15□□□□□ -0.14
PDPN-211ENST00000617617 ANAPC15P60006 121 aa14.15□□□□□ -0.14
PDPN-211ENST00000617617 FKBP1AP62942 108 aaKnown RBP14.15□□□□□ -0.14
PDPN-211ENST00000617617 VPS37DQ86XT2 251 aa14.15□□□□□ -0.14
PDPN-211ENST00000617617 WDR66Q8TBY9 1149 aa14.15□□□□□ -0.14
PDPN-211ENST00000617617 IL25Q9H293 177 aa14.15□□□□□ -0.14
PDPN-211ENST00000617617 CD209Q9NNX6 404 aa14.15□□□□□ -0.14
PDPN-211ENST00000617617 ATF5Q9Y2D1 282 aaPredicted RBP14.15□□□□□ -0.14
PDPN-211ENST00000617617 PI16Q6UXB8 463 aa14.15□□□□□ -0.14
PDPN-211ENST00000617617 SUGT1Q9Y2Z0 365 aa14.15□□□□□ -0.14
PDPN-211ENST00000617617 MAP3K12Q12852 859 aa14.14□□□□□ -0.15
PDPN-211ENST00000617617 CWC27Q6UX04 472 aaKnown RBP14.14□□□□□ -0.15
PDPN-211ENST00000617617 FAM227BQ96M60 508 aa14.14□□□□□ -0.15
PDPN-211ENST00000617617 PIM2Q9P1W9 311 aa14.14□□□□□ -0.15
PDPN-211ENST00000617617 NDUFB9Q9Y6M9 179 aa14.14□□□□□ -0.15
PDPN-211ENST00000617617 RPAP1Q9BWH6 1393 aaPredicted RBP14.14□□□□□ -0.15
PDPN-211ENST00000617617 TIAM2Q8IVF5 1701 aa14.14□□□□□ -0.15
PDPN-211ENST00000617617 CCDC171Q6TFL3 1326 aa14.14□□□□□ -0.15
PDPN-211ENST00000617617 CCDC93Q567U6 631 aa14.14□□□□□ -0.15
PDPN-211ENST00000617617 SLC51AQ86UW1 340 aa14.14□□□□□ -0.15
PDPN-211ENST00000617617 SPON1Q9HCB6 807 aa14.14□□□□□ -0.15
PDPN-211ENST00000617617 DDX60LQ5H9U9 1706 aaKnown RBP14.14□□□□□ -0.15
PDPN-211ENST00000617617 ZMYM6O95789 1325 aa14.14□□□□□ -0.15
PDPN-211ENST00000617617 LTBP3Q9NS15 1303 aa14.14□□□□□ -0.15
PDPN-211ENST00000617617 SPTY2D1Q68D10 685 aaPredicted RBP14.14□□□□□ -0.15
PDPN-211ENST00000617617 MAP4K1Q92918 833 aa14.14□□□□□ -0.15
PDPN-211ENST00000617617 PDE6AP16499 860 aa14.13□□□□□ -0.15
PDPN-211ENST00000617617 HSPA4P34932 840 aa14.13□□□□□ -0.15
PDPN-211ENST00000617617 WASHC4Q2M389 1173 aa14.13□□□□□ -0.15
PDPN-211ENST00000617617 TBC1D22AQ8WUA7 517 aa14.13□□□□□ -0.15
PDPN-211ENST00000617617 DSCC1Q9BVC3 393 aa14.13□□□□□ -0.15
PDPN-211ENST00000617617 MAST3O60307 1309 aa14.13□□□□□ -0.15
PDPN-211ENST00000617617 SBF1O95248 1867 aa14.13□□□□□ -0.15
PDPN-211ENST00000617617 PSDA5PKW4 1024 aaPredicted RBP14.12□□□□□ -0.15
PDPN-211ENST00000617617 KIF2CQ99661 725 aa14.12□□□□□ -0.15
PDPN-211ENST00000617617 A0A0G2JLW4 131 aa14.12□□□□□ -0.15
PDPN-211ENST00000617617 KIAA2012Q0VF49 1180 aa14.12□□□□□ -0.15
PDPN-211ENST00000617617 TSGA10IPQ3SY00 556 aa14.12□□□□□ -0.15
PDPN-211ENST00000617617 KIAA1211Q6ZU35 1233 aa14.12□□□□□ -0.15
PDPN-211ENST00000617617 PODNQ7Z5L7 613 aa14.12□□□□□ -0.15
PDPN-211ENST00000617617 C6orf229H3BNL8 230 aa14.11□□□□□ -0.15
PDPN-211ENST00000617617 MCCP23508 829 aa14.11□□□□□ -0.15
PDPN-211ENST00000617617 ZC3H12CQ9C0D7 883 aaKnown RBP14.11□□□□□ -0.15
PDPN-211ENST00000617617 NAV1Q8NEY1 1877 aa14.11□□□□□ -0.15
PDPN-211ENST00000617617 DALRD3Q5D0E6 543 aaKnown RBP14.11□□□□□ -0.15
PDPN-211ENST00000617617 SLC9C2Q5TAH2 1124 aa14.11□□□□□ -0.15
PDPN-211ENST00000617617 OSBP2Q969R2 916 aa14.11□□□□□ -0.15
PDPN-211ENST00000617617 NECTIN1Q15223 517 aa14.1□□□□□ -0.15
PDPN-211ENST00000617617 ZNF589Q86UQ0 364 aaPredicted RBP14.1□□□□□ -0.15
PDPN-211ENST00000617617 CERS3Q8IU89 383 aa14.1□□□□□ -0.15
PDPN-211ENST00000617617 WWC3Q9ULE0 1092 aa14.1□□□□□ -0.15
PDPN-211ENST00000617617 M0R2C6 588 aa14.1□□□□□ -0.15
PDPN-211ENST00000617617 ALX1Q15699 326 aa14.1□□□□□ -0.15
PDPN-211ENST00000617617 ERICH6Q7L0X2 663 aa14.1□□□□□ -0.15
PDPN-211ENST00000617617 ANO2Q9NQ90 1003 aa14.1□□□□□ -0.15
PDPN-211ENST00000617617 ZNF532Q9HCE3 1301 aa14.1□□□□□ -0.15
PDPN-211ENST00000617617 NSUN4Q96CB9 384 aaKnown RBP14.1□□□□□ -0.15
PDPN-211ENST00000617617 FAM163AQ96GL9 167 aaPredicted RBP14.1□□□□□ -0.15
PDPN-211ENST00000617617 U3KPZ7 1027 aaPredicted RBP14.1□□□□□ -0.15
PDPN-211ENST00000617617 GNAT2P19087 354 aa14.09□□□□□ -0.15
PDPN-211ENST00000617617 OLFM4Q6UX06 510 aa14.09□□□□□ -0.15
PDPN-211ENST00000617617 MRIQ9BWK5 157 aa14.09□□□□□ -0.15
PDPN-211ENST00000617617 IDH1O75874 414 aaKnown RBP14.09□□□□□ -0.15
PDPN-211ENST00000617617 GSTO1P78417 241 aa14.09□□□□□ -0.15
PDPN-211ENST00000617617 PTH1RQ03431 593 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms