RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.61■□□□□ 0.41
PTPRT-210ENST00000617474 ALS2CR12Q96Q35 445 aa17.61■□□□□ 0.41
PTPRT-210ENST00000617474 NRBP1Q9UHY1 535 aa17.61■□□□□ 0.41
PTPRT-210ENST00000617474 ANKRD62A6NC57 917 aa17.61■□□□□ 0.41
PTPRT-210ENST00000617474 GCP02774 474 aa17.61■□□□□ 0.41
PTPRT-210ENST00000617474 IFIT1BQ5T764 474 aaKnown RBP17.61■□□□□ 0.41
PTPRT-210ENST00000617474 MYL10Q9BUA6 226 aa17.61■□□□□ 0.41
PTPRT-210ENST00000617474 GOLGA6L7A0A1B0GV03 622 aa17.6■□□□□ 0.41
PTPRT-210ENST00000617474 EAF2Q96CJ1 260 aaPredicted RBP17.6■□□□□ 0.41
PTPRT-210ENST00000617474 ANO1Q5XXA6 986 aa17.6■□□□□ 0.41
PTPRT-210ENST00000617474 ZNF215Q9UL58 517 aaPredicted RBP17.6■□□□□ 0.41
PTPRT-210ENST00000617474 MAPK8IP1Q9UQF2 711 aa17.6■□□□□ 0.41
PTPRT-210ENST00000617474 SEPT7Q16181 437 aaKnown RBP17.6■□□□□ 0.41
PTPRT-210ENST00000617474 ESR2Q92731 530 aa17.6■□□□□ 0.41
PTPRT-210ENST00000617474 KAT14Q9H8E8 782 aa17.6■□□□□ 0.41
PTPRT-210ENST00000617474 ZNF202O95125 648 aa17.6■□□□□ 0.41
PTPRT-210ENST00000617474 SSH3Q8TE77 659 aa17.6■□□□□ 0.41
PTPRT-210ENST00000617474 KRT23Q9C075 422 aa17.6■□□□□ 0.41
PTPRT-210ENST00000617474 PHKBQ93100 1093 aa17.59■□□□□ 0.41
PTPRT-210ENST00000617474 FAM89AQ96GI7 184 aa17.59■□□□□ 0.41
PTPRT-210ENST00000617474 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.59■□□□□ 0.41
PTPRT-210ENST00000617474 UQCRFS1P1P0C7P4 283 aa17.59■□□□□ 0.41
PTPRT-210ENST00000617474 MNAT1P51948 309 aa17.59■□□□□ 0.41
PTPRT-210ENST00000617474 CTAGE1Q96RT6 745 aa17.59■□□□□ 0.41
PTPRT-210ENST00000617474 XPO4Q9C0E2 1151 aaKnown RBP17.59■□□□□ 0.41
PTPRT-210ENST00000617474 CABP5Q9NP86 173 aa17.59■□□□□ 0.41
PTPRT-210ENST00000617474 ERVK-7P63135 1459 aa17.59■□□□□ 0.41
PTPRT-210ENST00000617474 POGZQ7Z3K3 1410 aa17.59■□□□□ 0.41
PTPRT-210ENST00000617474 KCNA6P17658 529 aa17.59■□□□□ 0.41
PTPRT-210ENST00000617474 ARID5AQ03989 594 aa17.59■□□□□ 0.41
PTPRT-210ENST00000617474 TMEM266Q2M3C6 531 aa17.59■□□□□ 0.41
PTPRT-210ENST00000617474 ZMYM3Q14202 1370 aa17.59■□□□□ 0.41
PTPRT-210ENST00000617474 AOX1Q06278 1338 aa17.59■□□□□ 0.41
PTPRT-210ENST00000617474 KRI1Q8N9T8 703 aaKnown RBP17.59■□□□□ 0.41
PTPRT-210ENST00000617474 IL17REQ8NFR9 667 aa17.59■□□□□ 0.41
PTPRT-210ENST00000617474 CALML4Q96GE6 196 aa17.59■□□□□ 0.41
PTPRT-210ENST00000617474 USP28Q96RU2 1077 aa17.59■□□□□ 0.41
PTPRT-210ENST00000617474 KIF5BP33176 963 aa17.58■□□□□ 0.41
PTPRT-210ENST00000617474 TMEM132AQ24JP5 1023 aa17.58■□□□□ 0.41
PTPRT-210ENST00000617474 MEX3CQ5U5Q3 659 aaKnown RBP17.58■□□□□ 0.41
PTPRT-210ENST00000617474 RAB34Q9BZG1 259 aa17.58■□□□□ 0.41
PTPRT-210ENST00000617474 MMRN2Q9H8L6 949 aa17.58■□□□□ 0.41
PTPRT-210ENST00000617474 MACROD2A1Z1Q3 448 aa17.58■□□□□ 0.4
PTPRT-210ENST00000617474 ERCC6LQ2NKX8 1250 aa17.58■□□□□ 0.4
PTPRT-210ENST00000617474 ABCC2Q92887 1545 aa17.58■□□□□ 0.4
PTPRT-210ENST00000617474 EDC4Q6P2E9 1401 aaKnown RBP17.58■□□□□ 0.4
PTPRT-210ENST00000617474 CYLC1P35663 651 aaPredicted RBP17.58■□□□□ 0.4
PTPRT-210ENST00000617474 SPAG1Q07617 926 aa17.58■□□□□ 0.4
PTPRT-210ENST00000617474 GPIHBP1Q8IV16 184 aa17.57■□□□□ 0.4
PTPRT-210ENST00000617474 MAGEB6Q8N7X4 407 aa17.57■□□□□ 0.4
PTPRT-210ENST00000617474 CEP112Q8N8E3 955 aa17.57■□□□□ 0.4
PTPRT-210ENST00000617474 VPS16Q9H269 839 aa17.57■□□□□ 0.4
PTPRT-210ENST00000617474 KCNH3Q9ULD8 1083 aa17.57■□□□□ 0.4
PTPRT-210ENST00000617474 UBXN1Q04323 297 aa17.57■□□□□ 0.4
PTPRT-210ENST00000617474 KLHL34Q8N239 644 aa17.57■□□□□ 0.4
PTPRT-210ENST00000617474 EXOC1Q9NV70 894 aa17.57■□□□□ 0.4
PTPRT-210ENST00000617474 ZNF652Q9Y2D9 606 aa17.57■□□□□ 0.4
PTPRT-210ENST00000617474 ELP1O95163 1332 aa17.57■□□□□ 0.4
PTPRT-210ENST00000617474 VPS36Q86VN1 386 aa17.57■□□□□ 0.4
PTPRT-210ENST00000617474 TRMT44Q8IYL2 757 aaKnown RBP17.57■□□□□ 0.4
PTPRT-210ENST00000617474 GIMAP7Q8NHV1 300 aa17.57■□□□□ 0.4
PTPRT-210ENST00000617474 VWA3AA6NCI4 1184 aa17.57■□□□□ 0.4
PTPRT-210ENST00000617474 POLR2DO15514 142 aaKnown RBP17.57■□□□□ 0.4
PTPRT-210ENST00000617474 FGFR1OPO95684 399 aaKnown RBP17.57■□□□□ 0.4
PTPRT-210ENST00000617474 MCM7P33993 719 aa17.57■□□□□ 0.4
PTPRT-210ENST00000617474 ASIC1P78348 528 aa17.57■□□□□ 0.4
PTPRT-210ENST00000617474 LONRF3Q496Y0 759 aa17.57■□□□□ 0.4
PTPRT-210ENST00000617474 ZNF790Q6PG37 636 aa17.57■□□□□ 0.4
PTPRT-210ENST00000617474 PSMA7O14818 248 aa17.56■□□□□ 0.4
PTPRT-210ENST00000617474 ADAMTS2O95450 1211 aa17.56■□□□□ 0.4
PTPRT-210ENST00000617474 PDE4BQ07343 736 aa17.56■□□□□ 0.4
PTPRT-210ENST00000617474 STAMQ92783 540 aa17.56■□□□□ 0.4
PTPRT-210ENST00000617474 TM6SF1Q9BZW5 370 aa17.56■□□□□ 0.4
PTPRT-210ENST00000617474 CNNM2Q9H8M5 875 aa17.56■□□□□ 0.4
PTPRT-210ENST00000617474 ZNF287Q9HBT7 754 aa17.56■□□□□ 0.4
PTPRT-210ENST00000617474 KBTBD3Q8NAB2 608 aa17.56■□□□□ 0.4
PTPRT-210ENST00000617474 ZCRB1Q8TBF4 217 aaKnown RBP17.56■□□□□ 0.4
PTPRT-210ENST00000617474 NFE2L3Q9Y4A8 694 aa17.56■□□□□ 0.4
PTPRT-210ENST00000617474 HEATR3Q7Z4Q2 680 aa17.56■□□□□ 0.4
PTPRT-210ENST00000617474 ATRIPQ8WXE1 791 aa17.56■□□□□ 0.4
PTPRT-210ENST00000617474 IP6K1Q92551 441 aa17.56■□□□□ 0.4
PTPRT-210ENST00000617474 NAA15Q9BXJ9 866 aaKnown RBP17.56■□□□□ 0.4
PTPRT-210ENST00000617474 MBD5Q9P267 1494 aa17.56■□□□□ 0.4
PTPRT-210ENST00000617474 PPP1R12BO60237 982 aaPredicted RBP17.55■□□□□ 0.4
PTPRT-210ENST00000617474 KIF20AO95235 890 aa17.55■□□□□ 0.4
PTPRT-210ENST00000617474 ZNF174Q15697 407 aa17.55■□□□□ 0.4
PTPRT-210ENST00000617474 NBPF6Q5VWK0 638 aa17.55■□□□□ 0.4
PTPRT-210ENST00000617474 TMTC2Q8N394 836 aa17.55■□□□□ 0.4
PTPRT-210ENST00000617474 IGSF22Q8N9C0 903 aa17.55■□□□□ 0.4
PTPRT-210ENST00000617474 NBPF4Q96M43 638 aa17.55■□□□□ 0.4
PTPRT-210ENST00000617474 RABEP2Q9H5N1 569 aa17.55■□□□□ 0.4
PTPRT-210ENST00000617474 TUBB4AP04350 444 aa17.55■□□□□ 0.4
PTPRT-210ENST00000617474 EIF4A1P60842 406 aaKnown RBP17.55■□□□□ 0.4
PTPRT-210ENST00000617474 AMPD3Q01432 767 aa17.55■□□□□ 0.4
PTPRT-210ENST00000617474 MAP2K1Q02750 393 aaPredicted RBP17.55■□□□□ 0.4
PTPRT-210ENST00000617474 PPARDQ03181 441 aa17.55■□□□□ 0.4
PTPRT-210ENST00000617474 AKR1B15C9JRZ8 316 aaPredicted RBP17.55■□□□□ 0.4
PTPRT-210ENST00000617474 RMND1Q9NWS8 449 aa17.55■□□□□ 0.4
PTPRT-210ENST00000617474 JAG2Q9Y219 1238 aa17.55■□□□□ 0.4
PTPRT-210ENST00000617474 EYA2O00167 538 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms