RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CLMNQ96JQ2 1002 aa10.9□□□□□ -0.66
GPC6-202ENST00000617456 CFHR5Q9BXR6 569 aa10.9□□□□□ -0.66
GPC6-202ENST00000617456 DEFB129Q9H1M3 183 aa10.9□□□□□ -0.66
GPC6-202ENST00000617456 ZNF804BA4D1E1 1349 aa10.89□□□□□ -0.67
GPC6-202ENST00000617456 PI4KAP2A4QPH2 592 aa10.89□□□□□ -0.67
GPC6-202ENST00000617456 IGF2BP3O00425 579 aaKnown RBP eCLIP10.89□□□□□ -0.67
GPC6-202ENST00000617456 IGKV5-2P06315 115 aa10.89□□□□□ -0.67
GPC6-202ENST00000617456 KCNJ4P48050 445 aa10.89□□□□□ -0.67
GPC6-202ENST00000617456 DLGAP5Q15398 846 aa10.89□□□□□ -0.67
GPC6-202ENST00000617456 WDR63Q8IWG1 891 aa10.89□□□□□ -0.67
GPC6-202ENST00000617456 WWC1Q8IX03 1113 aa10.89□□□□□ -0.67
GPC6-202ENST00000617456 PI4KAP1Q8N8J0 262 aa10.89□□□□□ -0.67
GPC6-202ENST00000617456 CD99L2Q8TCZ2 262 aa10.89□□□□□ -0.67
GPC6-202ENST00000617456 WNK4Q96J92 1243 aa10.89□□□□□ -0.67
GPC6-202ENST00000617456 TAOK2Q9UL54 1235 aa10.89□□□□□ -0.67
GPC6-202ENST00000617456 LEMD3Q9Y2U8 911 aa10.89□□□□□ -0.67
GPC6-202ENST00000617456 CLRN2A0PK11 232 aa10.88□□□□□ -0.67
GPC6-202ENST00000617456 F8W031 263 aaPredicted RBP10.88□□□□□ -0.67
GPC6-202ENST00000617456 EN2P19622 333 aaPredicted RBP10.88□□□□□ -0.67
GPC6-202ENST00000617456 NEXNQ0ZGT2 675 aa10.88□□□□□ -0.67
GPC6-202ENST00000617456 CWF19L2Q2TBE0 894 aaKnown RBP10.88□□□□□ -0.67
GPC6-202ENST00000617456 INTS3Q68E01 1043 aaKnown RBP10.88□□□□□ -0.67
GPC6-202ENST00000617456 KSR2Q6VAB6 950 aa10.88□□□□□ -0.67
GPC6-202ENST00000617456 UBE3BQ7Z3V4 1068 aa10.88□□□□□ -0.67
GPC6-202ENST00000617456 ERO1AQ96HE7 468 aa10.88□□□□□ -0.67
GPC6-202ENST00000617456 ZBED3Q96IU2 234 aaPredicted RBP10.88□□□□□ -0.67
GPC6-202ENST00000617456 PCDHAC2Q9Y5I4 1007 aa10.88□□□□□ -0.67
GPC6-202ENST00000617456 SPEF2Q9C093 1822 aa10.88□□□□□ -0.67
GPC6-202ENST00000617456 MKI67P46013 3256 aaKnown RBP10.88□□□□□ -0.67
GPC6-202ENST00000617456 PPP1R12BO60237 982 aaPredicted RBP10.87□□□□□ -0.67
GPC6-202ENST00000617456 ZBTB48P10074 688 aaPredicted RBP10.87□□□□□ -0.67
GPC6-202ENST00000617456 ITGA6P23229 1130 aa10.87□□□□□ -0.67
GPC6-202ENST00000617456 MMP14P50281 582 aa10.87□□□□□ -0.67
GPC6-202ENST00000617456 INHBEP58166 350 aa10.87□□□□□ -0.67
GPC6-202ENST00000617456 CRHR2Q13324 411 aa10.87□□□□□ -0.67
GPC6-202ENST00000617456 TSPYL6Q8N831 410 aa10.87□□□□□ -0.67
GPC6-202ENST00000617456 MPHOSPH8Q99549 860 aa10.87□□□□□ -0.67
GPC6-202ENST00000617456 STK31Q9BXU1 1019 aa10.87□□□□□ -0.67
GPC6-202ENST00000617456 ANKRD2Q9GZV1 360 aa10.87□□□□□ -0.67
GPC6-202ENST00000617456 EFCC1Q9HA90 598 aa10.87□□□□□ -0.67
GPC6-202ENST00000617456 VEZTQ9HBM0 779 aa10.87□□□□□ -0.67
GPC6-202ENST00000617456 PTPN22Q9Y2R2 807 aa10.87□□□□□ -0.67
GPC6-202ENST00000617456 HTTP42858 3142 aa10.87□□□□□ -0.67
GPC6-202ENST00000617456 NEURL1BA8MQ27 555 aa10.86□□□□□ -0.67
GPC6-202ENST00000617456 SNAP23O00161 211 aa10.86□□□□□ -0.67
GPC6-202ENST00000617456 GJA5P36382 358 aa10.86□□□□□ -0.67
GPC6-202ENST00000617456 SUPT20HL1Q3ZLR7 823 aa10.86□□□□□ -0.67
GPC6-202ENST00000617456 CFAP100Q494V2 611 aa10.86□□□□□ -0.67
GPC6-202ENST00000617456 NBPF12Q5TAG4 269 aaPredicted RBP10.86□□□□□ -0.67
GPC6-202ENST00000617456 OTUD7BQ6GQQ9 843 aa10.86□□□□□ -0.67
GPC6-202ENST00000617456 CERS5Q8N5B7 392 aa10.86□□□□□ -0.67
GPC6-202ENST00000617456 MRS2Q9HD23 443 aa10.86□□□□□ -0.67
GPC6-202ENST00000617456 CD209Q9NNX6 404 aa10.86□□□□□ -0.67
GPC6-202ENST00000617456 JAG2Q9Y219 1238 aa10.86□□□□□ -0.67
GPC6-202ENST00000617456 CEP290O15078 2479 aa10.86□□□□□ -0.67
GPC6-202ENST00000617456 SSC5DA1L4H1 1573 aa10.86□□□□□ -0.67
GPC6-202ENST00000617456 H7C1W4 665 aa10.85□□□□□ -0.67
GPC6-202ENST00000617456 MYO1BO43795 1136 aa10.85□□□□□ -0.67
GPC6-202ENST00000617456 IREB2P48200 963 aaKnown RBP10.85□□□□□ -0.67
GPC6-202ENST00000617456 RBM5P52756 815 aaKnown RBP eCLIP10.85□□□□□ -0.67
GPC6-202ENST00000617456 CHRNDQ07001 517 aa10.85□□□□□ -0.67
GPC6-202ENST00000617456 MAP3K11Q16584 847 aa10.85□□□□□ -0.67
GPC6-202ENST00000617456 HELBQ8NG08 1087 aaPredicted RBP10.85□□□□□ -0.67
GPC6-202ENST00000617456 PPP2R3BQ9Y5P8 575 aa10.85□□□□□ -0.67
GPC6-202ENST00000617456 COL1A1P02452 1464 aaPredicted RBP10.85□□□□□ -0.67
GPC6-202ENST00000617456 AOX1Q06278 1338 aa10.84□□□□□ -0.67
GPC6-202ENST00000617456 ZNF646O15015 1829 aaPredicted RBP10.84□□□□□ -0.67
GPC6-202ENST00000617456 TAF5LO75529 589 aa10.84□□□□□ -0.67
GPC6-202ENST00000617456 USP2O75604 605 aaPredicted RBP10.84□□□□□ -0.67
GPC6-202ENST00000617456 MYCP01106 439 aaPredicted RBP10.84□□□□□ -0.67
GPC6-202ENST00000617456 CAP1Q01518 475 aa10.84□□□□□ -0.67
GPC6-202ENST00000617456 SP3Q02447 781 aa10.84□□□□□ -0.67
GPC6-202ENST00000617456 TWISTNBQ3B726 338 aaPredicted RBP10.84□□□□□ -0.67
GPC6-202ENST00000617456 CCDC184Q52MB2 194 aa10.84□□□□□ -0.67
GPC6-202ENST00000617456 G2E3Q7L622 706 aa10.84□□□□□ -0.67
GPC6-202ENST00000617456 TSR2Q969E8 191 aaKnown RBP10.84□□□□□ -0.67
GPC6-202ENST00000617456 ARMC5Q96C12 935 aa10.84□□□□□ -0.67
GPC6-202ENST00000617456 PRMT6Q96LA8 375 aaPredicted RBP10.84□□□□□ -0.67
GPC6-202ENST00000617456 PTPN18Q99952 460 aa10.84□□□□□ -0.67
GPC6-202ENST00000617456 TMEM106CQ9BVX2 250 aa10.84□□□□□ -0.67
GPC6-202ENST00000617456 ELP3Q9H9T3 547 aa10.84□□□□□ -0.67
GPC6-202ENST00000617456 TRIOBPQ9H2D6 2365 aa10.84□□□□□ -0.67
GPC6-202ENST00000617456 CENPFP49454 3210 aa10.83□□□□□ -0.68
GPC6-202ENST00000617456 SPDYE2BA6NHP3 402 aa10.83□□□□□ -0.68
GPC6-202ENST00000617456 SPDYE6P0CI01 402 aa10.83□□□□□ -0.68
GPC6-202ENST00000617456 FXR1P51114 621 aaKnown RBP eCLIP10.83□□□□□ -0.68
GPC6-202ENST00000617456 RASA3Q14644 834 aa10.83□□□□□ -0.68
GPC6-202ENST00000617456 ANKRD13AQ8IZ07 590 aa10.83□□□□□ -0.68
GPC6-202ENST00000617456 MTMR14Q8NCE2 650 aa10.83□□□□□ -0.68
GPC6-202ENST00000617456 CHMP3Q9Y3E7 222 aa10.83□□□□□ -0.68
GPC6-202ENST00000617456 MYH3P11055 1940 aa10.83□□□□□ -0.68
GPC6-202ENST00000617456 ANKRD18BA2A2Z9 1011 aa10.82□□□□□ -0.68
GPC6-202ENST00000617456 PLIN1O60240 522 aa10.82□□□□□ -0.68
GPC6-202ENST00000617456 GCKRQ14397 625 aa10.82□□□□□ -0.68
GPC6-202ENST00000617456 SLC4A8Q2Y0W8 1093 aa10.82□□□□□ -0.68
GPC6-202ENST00000617456 ZNF804AQ7Z570 1209 aa10.82□□□□□ -0.68
GPC6-202ENST00000617456 OPTNQ96CV9 577 aa10.82□□□□□ -0.68
GPC6-202ENST00000617456 PLA2G12BQ9BX93 195 aa10.82□□□□□ -0.68
GPC6-202ENST00000617456 COLQQ9Y215 455 aaPredicted RBP10.82□□□□□ -0.68
GPC6-202ENST00000617456 PTCH2Q9Y6C5 1203 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms