RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 KIAA0825Q8IV33 1275 aa23.37■■□□□ 1.33
SUSD3-205ENST00000617293 OGFOD1Q8N543 542 aa23.37■■□□□ 1.33
SUSD3-205ENST00000617293 CHMP4BQ9H444 224 aaKnown RBP23.37■■□□□ 1.33
SUSD3-205ENST00000617293 ZC3H15Q8WU90 426 aaKnown RBP23.36■■□□□ 1.33
SUSD3-205ENST00000617293 MYOZ2Q9NPC6 264 aa23.36■■□□□ 1.33
SUSD3-205ENST00000617293 ZBTB40Q9NUA8 1239 aa23.36■■□□□ 1.33
SUSD3-205ENST00000617293 SURF6O75683 361 aaKnown RBP23.35■■□□□ 1.33
SUSD3-205ENST00000617293 TIMM10P62072 90 aa23.35■■□□□ 1.33
SUSD3-205ENST00000617293 CERS5Q8N5B7 392 aa23.35■■□□□ 1.33
SUSD3-205ENST00000617293 PGAP2Q9UHJ9 254 aa23.35■■□□□ 1.33
SUSD3-205ENST00000617293 F8W031 263 aaPredicted RBP23.34■■□□□ 1.33
SUSD3-205ENST00000617293 CHAF1AQ13111 956 aaPredicted RBP23.34■■□□□ 1.33
SUSD3-205ENST00000617293 OS9Q13438 667 aaPredicted RBP23.34■■□□□ 1.33
SUSD3-205ENST00000617293 HDAC9Q9UKV0 1011 aa23.34■■□□□ 1.33
SUSD3-205ENST00000617293 AKAP2Q9Y2D5 859 aa23.34■■□□□ 1.33
SUSD3-205ENST00000617293 FAM205AQ6ZU69 1335 aa23.33■■□□□ 1.33
SUSD3-205ENST00000617293 PASKQ96RG2 1323 aa23.33■■□□□ 1.33
SUSD3-205ENST00000617293 FKBP1AP62942 108 aaKnown RBP23.33■■□□□ 1.33
SUSD3-205ENST00000617293 HTRA3P83110 453 aa23.33■■□□□ 1.33
SUSD3-205ENST00000617293 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.33■■□□□ 1.33
SUSD3-205ENST00000617293 A0A1B0GUL7 405 aa23.32■■□□□ 1.32
SUSD3-205ENST00000617293 RRP1P56182 461 aaKnown RBP23.32■■□□□ 1.32
SUSD3-205ENST00000617293 SCARF1Q14162 830 aa23.32■■□□□ 1.32
SUSD3-205ENST00000617293 MFSD14BQ5SR56 506 aa23.32■■□□□ 1.32
SUSD3-205ENST00000617293 NEUROD6Q96NK8 337 aa23.32■■□□□ 1.32
SUSD3-205ENST00000617293 ADORA1P30542 326 aa23.31■■□□□ 1.32
SUSD3-205ENST00000617293 MMP14P50281 582 aa23.31■■□□□ 1.32
SUSD3-205ENST00000617293 RPAP2Q8IXW5 612 aaPredicted RBP23.31■■□□□ 1.32
SUSD3-205ENST00000617293 DCPSQ96C86 337 aaKnown RBP23.31■■□□□ 1.32
SUSD3-205ENST00000617293 GLIS2Q9BZE0 524 aaPredicted RBP23.31■■□□□ 1.32
SUSD3-205ENST00000617293 POLR2AP24928 1970 aaKnown RBP23.31■■□□□ 1.32
SUSD3-205ENST00000617293 TRAF5O00463 557 aa23.3■■□□□ 1.32
SUSD3-205ENST00000617293 FMR1Q06787 632 aaKnown RBP eCLIP23.3■■□□□ 1.32
SUSD3-205ENST00000617293 CDC37L1Q7L3B6 337 aa23.3■■□□□ 1.32
SUSD3-205ENST00000617293 GNL3LQ9NVN8 582 aaKnown RBP23.3■■□□□ 1.32
SUSD3-205ENST00000617293 NOP58Q9Y2X3 529 aaKnown RBP23.3■■□□□ 1.32
SUSD3-205ENST00000617293 ASTN2O75129 1339 aaPredicted RBP23.3■■□□□ 1.32
SUSD3-205ENST00000617293 USP48Q86UV5 1035 aa23.29■■□□□ 1.32
SUSD3-205ENST00000617293 XAGE2Q96GT9 111 aa23.29■■□□□ 1.32
SUSD3-205ENST00000617293 PHKA1P46020 1223 aa23.28■■□□□ 1.32
SUSD3-205ENST00000617293 NBPF9Q3BBW0 867 aa23.28■■□□□ 1.32
SUSD3-205ENST00000617293 ANGEL2Q5VTE6 544 aaKnown RBP23.28■■□□□ 1.32
SUSD3-205ENST00000617293 CCDC102BQ68D86 513 aa23.28■■□□□ 1.32
SUSD3-205ENST00000617293 TBC1D22AQ8WUA7 517 aa23.28■■□□□ 1.32
SUSD3-205ENST00000617293 GGA3Q9NZ52 723 aa23.28■■□□□ 1.32
SUSD3-205ENST00000617293 WNT10BO00744 389 aa23.27■■□□□ 1.32
SUSD3-205ENST00000617293 HMMRO75330 724 aa23.27■■□□□ 1.32
SUSD3-205ENST00000617293 KRT26Q7Z3Y9 468 aa23.27■■□□□ 1.32
SUSD3-205ENST00000617293 TTF2Q9UNY4 1162 aaKnown RBP23.27■■□□□ 1.32
SUSD3-205ENST00000617293 EXOC6BQ9Y2D4 811 aa23.27■■□□□ 1.32
SUSD3-205ENST00000617293 MYH13Q9UKX3 1938 aa23.27■■□□□ 1.32
SUSD3-205ENST00000617293 TMEM88BA6NKF7 163 aa23.26■■□□□ 1.31
SUSD3-205ENST00000617293 DLGAP5Q15398 846 aa23.26■■□□□ 1.31
SUSD3-205ENST00000617293 GORABQ5T7V8 394 aa23.26■■□□□ 1.31
SUSD3-205ENST00000617293 SIRT2Q8IXJ6 389 aa23.26■■□□□ 1.31
SUSD3-205ENST00000617293 CREBZFQ9NS37 354 aa23.26■■□□□ 1.31
SUSD3-205ENST00000617293 ARAP2Q8WZ64 1704 aa23.25■■□□□ 1.31
SUSD3-205ENST00000617293 RBM5P52756 815 aaKnown RBP eCLIP23.25■■□□□ 1.31
SUSD3-205ENST00000617293 CFAP100Q494V2 611 aa23.25■■□□□ 1.31
SUSD3-205ENST00000617293 DLK2Q6UY11 383 aa23.25■■□□□ 1.31
SUSD3-205ENST00000617293 SULF1Q8IWU6 871 aa23.25■■□□□ 1.31
SUSD3-205ENST00000617293 ADM5C9JUS6 153 aa23.24■■□□□ 1.31
SUSD3-205ENST00000617293 GRIK5Q16478 980 aa23.24■■□□□ 1.31
SUSD3-205ENST00000617293 TNNI3KQ59H18 835 aa23.24■■□□□ 1.31
SUSD3-205ENST00000617293 WDR66Q8TBY9 1149 aa23.24■■□□□ 1.31
SUSD3-205ENST00000617293 ZNF408Q9H9D4 720 aa23.24■■□□□ 1.31
SUSD3-205ENST00000617293 GPR108Q9NPR9 543 aa23.24■■□□□ 1.31
SUSD3-205ENST00000617293 DENND2AQ9ULE3 1009 aa23.24■■□□□ 1.31
SUSD3-205ENST00000617293 SCAF8Q9UPN6 1271 aaKnown RBP23.24■■□□□ 1.31
SUSD3-205ENST00000617293 PCDHAC2Q9Y5I4 1007 aa23.24■■□□□ 1.31
SUSD3-205ENST00000617293 FPGT-TNNI3KV9GXZ4 949 aa23.24■■□□□ 1.31
SUSD3-205ENST00000617293 CEP350Q5VT06 3117 aa23.24■■□□□ 1.31
SUSD3-205ENST00000617293 SEMA3EO15041 775 aa23.23■■□□□ 1.31
SUSD3-205ENST00000617293 HSP90AB4PQ58FF6 505 aa23.23■■□□□ 1.31
SUSD3-205ENST00000617293 TRPM7Q96QT4 1865 aa23.23■■□□□ 1.31
SUSD3-205ENST00000617293 CELF2O95319 508 aaKnown RBP23.22■■□□□ 1.31
SUSD3-205ENST00000617293 CST9Q5W186 159 aa23.22■■□□□ 1.31
SUSD3-205ENST00000617293 ERC1Q8IUD2 1116 aa23.22■■□□□ 1.31
SUSD3-205ENST00000617293 MTMR14Q8NCE2 650 aa23.22■■□□□ 1.31
SUSD3-205ENST00000617293 ZBED3Q96IU2 234 aaPredicted RBP23.22■■□□□ 1.31
SUSD3-205ENST00000617293 PRMT6Q96LA8 375 aaPredicted RBP23.22■■□□□ 1.31
SUSD3-205ENST00000617293 COL1A1P02452 1464 aaPredicted RBP23.22■■□□□ 1.31
SUSD3-205ENST00000617293 APBB1O00213 710 aa23.21■■□□□ 1.31
SUSD3-205ENST00000617293 DNAJC5GQ8N7S2 189 aa23.21■■□□□ 1.31
SUSD3-205ENST00000617293 PITPNM2Q9BZ72 1349 aa23.21■■□□□ 1.31
SUSD3-205ENST00000617293 SPDYE2BA6NHP3 402 aa23.2■■□□□ 1.3
SUSD3-205ENST00000617293 MYO1BO43795 1136 aa23.2■■□□□ 1.3
SUSD3-205ENST00000617293 SPDYE6P0CI01 402 aa23.2■■□□□ 1.3
SUSD3-205ENST00000617293 CRKP46108 304 aa23.2■■□□□ 1.3
SUSD3-205ENST00000617293 RASGRF1Q13972 1273 aa23.2■■□□□ 1.3
SUSD3-205ENST00000617293 CRBNQ96SW2 442 aa23.2■■□□□ 1.3
SUSD3-205ENST00000617293 DBNDD2Q9BQY9 259 aa23.2■■□□□ 1.3
SUSD3-205ENST00000617293 SERPINA10Q9UK55 444 aa23.2■■□□□ 1.3
SUSD3-205ENST00000617293 ABT1Q9ULW3 272 aaKnown RBP23.2■■□□□ 1.3
SUSD3-205ENST00000617293 SUGT1Q9Y2Z0 365 aa23.2■■□□□ 1.3
SUSD3-205ENST00000617293 EAF2Q96CJ1 260 aaPredicted RBP23.19■■□□□ 1.3
SUSD3-205ENST00000617293 CCDC8Q9H0W5 538 aaPredicted RBP23.19■■□□□ 1.3
SUSD3-205ENST00000617293 CCDC158Q5M9N0 1113 aa23.18■■□□□ 1.3
SUSD3-205ENST00000617293 RHPN1Q8TCX5 695 aa23.18■■□□□ 1.3
SUSD3-205ENST00000617293 BCL11AQ9H165 835 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms