RNA–Protein interactions for RNA: ENST00000617161.1

CA9-204, Transcript of carbonic anhydrase 9, humanhuman

TSL 1 (best) BASIC

Gene CA9, Length 1,374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CA9-204ENST00000617161 USP48Q86UV5 1035 aa28.31■■■□□ 2.12
CA9-204ENST00000617161 C1orf115Q9H7X2 142 aa28.31■■■□□ 2.12
CA9-204ENST00000617161 IQSEC3Q9UPP2 1182 aaPredicted RBP28.31■■■□□ 2.12
CA9-204ENST00000617161 ARAP2Q8WZ64 1704 aa28.31■■■□□ 2.12
CA9-204ENST00000617161 FKBP1AP62942 108 aaKnown RBP28.3■■■□□ 2.12
CA9-204ENST00000617161 OGFOD1Q8N543 542 aa28.3■■■□□ 2.12
CA9-204ENST00000617161 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.3■■■□□ 2.12
CA9-204ENST00000617161 ADM5C9JUS6 153 aa28.29■■■□□ 2.12
CA9-204ENST00000617161 WNT10BO00744 389 aa28.29■■■□□ 2.12
CA9-204ENST00000617161 ANGEL2Q5VTE6 544 aaKnown RBP28.29■■■□□ 2.12
CA9-204ENST00000617161 KRT26Q7Z3Y9 468 aa28.29■■■□□ 2.12
CA9-204ENST00000617161 LPIN2Q92539 896 aa28.29■■■□□ 2.12
CA9-204ENST00000617161 MKRN1Q9UHC7 482 aaKnown RBP28.29■■■□□ 2.12
CA9-204ENST00000617161 IFIT1P09914 478 aaKnown RBP28.28■■■□□ 2.12
CA9-204ENST00000617161 CAVIN4Q5BKX8 364 aa28.28■■■□□ 2.12
CA9-204ENST00000617161 DCPSQ96C86 337 aaKnown RBP28.28■■■□□ 2.12
CA9-204ENST00000617161 ZBED3Q96IU2 234 aaPredicted RBP28.28■■■□□ 2.12
CA9-204ENST00000617161 CEP126Q9P2H0 1117 aa28.28■■■□□ 2.12
CA9-204ENST00000617161 VPS37DQ86XT2 251 aa28.27■■■□□ 2.12
CA9-204ENST00000617161 JMYQ8N9B5 988 aa28.27■■■□□ 2.12
CA9-204ENST00000617161 CNTNAP1P78357 1384 aa28.27■■■□□ 2.12
CA9-204ENST00000617161 CELF2O95319 508 aaKnown RBP28.26■■■□□ 2.12
CA9-204ENST00000617161 SLC5A1P13866 664 aa28.26■■■□□ 2.12
CA9-204ENST00000617161 POLA2Q14181 598 aa28.26■■■□□ 2.12
CA9-204ENST00000617161 ATP2B3Q16720 1220 aa28.26■■■□□ 2.12
CA9-204ENST00000617161 SCAF8Q9UPN6 1271 aaKnown RBP28.26■■■□□ 2.12
CA9-204ENST00000617161 PCDHAC2Q9Y5I4 1007 aa28.26■■■□□ 2.12
CA9-204ENST00000617161 F8W031 263 aaPredicted RBP28.25■■■□□ 2.11
CA9-204ENST00000617161 MMP14P50281 582 aa28.25■■■□□ 2.11
CA9-204ENST00000617161 MFSD14BQ5SR56 506 aa28.25■■■□□ 2.11
CA9-204ENST00000617161 COL1A1P02452 1464 aaPredicted RBP28.25■■■□□ 2.11
CA9-204ENST00000617161 MYH13Q9UKX3 1938 aa28.25■■■□□ 2.11
CA9-204ENST00000617161 ATP8B2P98198 1209 aa28.24■■■□□ 2.11
CA9-204ENST00000617161 GRIK5Q16478 980 aa28.24■■■□□ 2.11
CA9-204ENST00000617161 HDAC9Q9UKV0 1011 aa28.24■■■□□ 2.11
CA9-204ENST00000617161 RASSF10A6NK89 507 aa28.24■■■□□ 2.11
CA9-204ENST00000617161 TFCP2Q12800 502 aa28.24■■■□□ 2.11
CA9-204ENST00000617161 SSH3Q8TE77 659 aa28.24■■■□□ 2.11
CA9-204ENST00000617161 PITPNM2Q9BZ72 1349 aa28.23■■■□□ 2.11
CA9-204ENST00000617161 ZNF408Q9H9D4 720 aa28.23■■■□□ 2.11
CA9-204ENST00000617161 ECM29Q5VYK3 1845 aa28.22■■■□□ 2.11
CA9-204ENST00000617161 ADORA1P30542 326 aa28.22■■■□□ 2.11
CA9-204ENST00000617161 CHAF1AQ13111 956 aaPredicted RBP28.22■■■□□ 2.11
CA9-204ENST00000617161 MVPQ14764 893 aaKnown RBP28.22■■■□□ 2.11
CA9-204ENST00000617161 C20orf194Q5TEA3 1177 aa28.22■■■□□ 2.11
CA9-204ENST00000617161 SULF1Q8IWU6 871 aa28.22■■■□□ 2.11
CA9-204ENST00000617161 MTMR14Q8NCE2 650 aa28.22■■■□□ 2.11
CA9-204ENST00000617161 ABT1Q9ULW3 272 aaKnown RBP28.22■■■□□ 2.11
CA9-204ENST00000617161 COG6Q9Y2V7 657 aa28.22■■■□□ 2.11
CA9-204ENST00000617161 TLL2Q9Y6L7 1015 aa28.22■■■□□ 2.11
CA9-204ENST00000617161 AOX1Q06278 1338 aa28.21■■■□□ 2.11
CA9-204ENST00000617161 MS4A1P11836 297 aa28.21■■■□□ 2.11
CA9-204ENST00000617161 YTHDC1Q96MU7 727 aaKnown RBP28.21■■■□□ 2.11
CA9-204ENST00000617161 VEGFBP49765 207 aa28.2■■■□□ 2.1
CA9-204ENST00000617161 TIMM10P62072 90 aa28.2■■■□□ 2.1
CA9-204ENST00000617161 SAPCD2Q86UD0 394 aa28.2■■■□□ 2.1
CA9-204ENST00000617161 FRAT2O75474 233 aaPredicted RBP28.19■■■□□ 2.1
CA9-204ENST00000617161 PHKA1P46020 1223 aa28.19■■■□□ 2.1
CA9-204ENST00000617161 DEFB115Q30KQ5 88 aa28.19■■■□□ 2.1
CA9-204ENST00000617161 CFAP100Q494V2 611 aa28.19■■■□□ 2.1
CA9-204ENST00000617161 CEP85Q6P2H3 762 aa28.19■■■□□ 2.1
CA9-204ENST00000617161 TTF2Q9UNY4 1162 aaKnown RBP28.19■■■□□ 2.1
CA9-204ENST00000617161 A0A1B0GUL7 405 aa28.18■■■□□ 2.1
CA9-204ENST00000617161 DLGAP5Q15398 846 aa28.18■■■□□ 2.1
CA9-204ENST00000617161 CDCA5Q96FF9 252 aa28.18■■■□□ 2.1
CA9-204ENST00000617161 PRMT6Q96LA8 375 aaPredicted RBP28.18■■■□□ 2.1
CA9-204ENST00000617161 SPDYE2BA6NHP3 402 aa28.17■■■□□ 2.1
CA9-204ENST00000617161 SPDYE6P0CI01 402 aa28.17■■■□□ 2.1
CA9-204ENST00000617161 G3BP1Q13283 466 aaKnown RBP eCLIP28.16■■■□□ 2.12e-7■□□□□ 9
CA9-204ENST00000617161 CCDC102BQ68D86 513 aa28.16■■■□□ 2.1
CA9-204ENST00000617161 TBC1D22AQ8WUA7 517 aa28.16■■■□□ 2.1
CA9-204ENST00000617161 PRAMEF18Q5VWM3 479 aa28.15■■■□□ 2.1
CA9-204ENST00000617161 XAGE2Q96GT9 111 aa28.15■■■□□ 2.1
CA9-204ENST00000617161 ZBTB40Q9NUA8 1239 aa28.15■■■□□ 2.1
CA9-204ENST00000617161 DDX19BQ9UMR2 479 aa28.15■■■□□ 2.1
CA9-204ENST00000617161 SERPINA10Q9UK55 444 aa28.14■■■□□ 2.1
CA9-204ENST00000617161 AKAP2Q9Y2D5 859 aa28.14■■■□□ 2.1
CA9-204ENST00000617161 NOP58Q9Y2X3 529 aaKnown RBP28.14■■■□□ 2.1
CA9-204ENST00000617161 PDE3AQ14432 1141 aa28.13■■■□□ 2.09
CA9-204ENST00000617161 GBA2Q9HCG7 927 aaPredicted RBP28.13■■■□□ 2.09
CA9-204ENST00000617161 ZBTB22O15209 634 aa28.12■■■□□ 2.09
CA9-204ENST00000617161 SURF6O75683 361 aaKnown RBP28.12■■■□□ 2.09
CA9-204ENST00000617161 CYP4F22Q6NT55 531 aa28.12■■■□□ 2.09
CA9-204ENST00000617161 THSD7BQ9C0I4 1608 aa28.12■■■□□ 2.09
CA9-204ENST00000617161 WDR33Q9C0J8 1336 aaKnown RBP28.12■■■□□ 2.09
CA9-204ENST00000617161 CLRN2A0PK11 232 aa28.11■■■□□ 2.09
CA9-204ENST00000617161 CRKP46108 304 aa28.11■■■□□ 2.09
CA9-204ENST00000617161 RBM5P52756 815 aaKnown RBP eCLIP28.11■■■□□ 2.09
CA9-204ENST00000617161 RASGRF1Q13972 1273 aa28.11■■■□□ 2.09
CA9-204ENST00000617161 APOBEC3FQ8IUX4 373 aaKnown RBP28.11■■■□□ 2.09
CA9-204ENST00000617161 WDR66Q8TBY9 1149 aa28.11■■■□□ 2.09
CA9-204ENST00000617161 HHIPL1Q96JK4 782 aa28.11■■■□□ 2.09
CA9-204ENST00000617161 CAPNS2Q96L46 248 aa28.11■■■□□ 2.09
CA9-204ENST00000617161 NEUROD6Q96NK8 337 aa28.11■■■□□ 2.09
CA9-204ENST00000617161 GNL3LQ9NVN8 582 aaKnown RBP28.11■■■□□ 2.09
CA9-204ENST00000617161 SIRT2Q8IXJ6 389 aa28.1■■■□□ 2.09
CA9-204ENST00000617161 SUGT1Q9Y2Z0 365 aa28.1■■■□□ 2.09
CA9-204ENST00000617161 SEMA3EO15041 775 aa28.09■■■□□ 2.09
CA9-204ENST00000617161 HUNKP57058 714 aa28.09■■■□□ 2.09
CA9-204ENST00000617161 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms