RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 TRIM27P14373 513 aa18.64■□□□□ 0.57
UBXN1-218ENST00000616865 ITGA6P23229 1130 aa18.64■□□□□ 0.57
UBXN1-218ENST00000616865 KLRK1P26718 216 aa18.64■□□□□ 0.57
UBXN1-218ENST00000616865 NF2P35240 595 aa18.64■□□□□ 0.57
UBXN1-218ENST00000616865 GCKRQ14397 625 aa18.64■□□□□ 0.57
UBXN1-218ENST00000616865 DZIP1LQ8IYY4 767 aaKnown RBP18.64■□□□□ 0.57
UBXN1-218ENST00000616865 ANKRD2Q9GZV1 360 aa18.64■□□□□ 0.57
UBXN1-218ENST00000616865 COL1A1P02452 1464 aaPredicted RBP18.64■□□□□ 0.57
UBXN1-218ENST00000616865 LAMB1P07942 1786 aa18.63■□□□□ 0.57
UBXN1-218ENST00000616865 CASP7P55210 303 aa18.63■□□□□ 0.57
UBXN1-218ENST00000616865 TTLL5Q6EMB2 1281 aa18.63■□□□□ 0.57
UBXN1-218ENST00000616865 APOBEC3FQ8IUX4 373 aaKnown RBP18.62■□□□□ 0.57
UBXN1-218ENST00000616865 KIAA0825Q8IV33 1275 aa18.62■□□□□ 0.57
UBXN1-218ENST00000616865 ZNF296Q8WUU4 475 aaPredicted RBP18.62■□□□□ 0.57
UBXN1-218ENST00000616865 MPHOSPH8Q99549 860 aa18.62■□□□□ 0.57
UBXN1-218ENST00000616865 SRCIN1Q9C0H9 1055 aa18.62■□□□□ 0.57
UBXN1-218ENST00000616865 HDAC9Q9UKV0 1011 aa18.62■□□□□ 0.57
UBXN1-218ENST00000616865 CSF1RP07333 972 aa18.61■□□□□ 0.57
UBXN1-218ENST00000616865 TM4SF4P48230 202 aa18.61■□□□□ 0.57
UBXN1-218ENST00000616865 GTF2IP78347 998 aa18.61■□□□□ 0.57
UBXN1-218ENST00000616865 ZBED3Q96IU2 234 aaPredicted RBP18.61■□□□□ 0.57
UBXN1-218ENST00000616865 HPS5Q9UPZ3 1129 aa18.61■□□□□ 0.57
UBXN1-218ENST00000616865 TBC1D8O95759 1140 aa18.6■□□□□ 0.57
UBXN1-218ENST00000616865 KCNJ4P48050 445 aa18.6■□□□□ 0.57
UBXN1-218ENST00000616865 CHRNDQ07001 517 aa18.6■□□□□ 0.57
UBXN1-218ENST00000616865 SREBF2Q12772 1141 aa18.6■□□□□ 0.57
UBXN1-218ENST00000616865 MKRN3Q13064 507 aaKnown RBP18.6■□□□□ 0.57
UBXN1-218ENST00000616865 PKN2Q16513 984 aaKnown RBP18.6■□□□□ 0.57
UBXN1-218ENST00000616865 NOM1Q5C9Z4 860 aaKnown RBP18.6■□□□□ 0.57
UBXN1-218ENST00000616865 LINS1Q8NG48 757 aa18.6■□□□□ 0.57
UBXN1-218ENST00000616865 TNNQ9UQP3 1299 aa18.6■□□□□ 0.57
UBXN1-218ENST00000616865 IRS2Q9Y4H2 1338 aa18.59■□□□□ 0.57
UBXN1-218ENST00000616865 PTPN12Q05209 780 aaKnown RBP18.59■□□□□ 0.57
UBXN1-218ENST00000616865 PDE3AQ14432 1141 aa18.59■□□□□ 0.57
UBXN1-218ENST00000616865 ARMC9Q7Z3E5 817 aa18.59■□□□□ 0.57
UBXN1-218ENST00000616865 ITPRIPQ8IWB1 547 aa18.59■□□□□ 0.57
UBXN1-218ENST00000616865 PANK1Q8TE04 598 aa18.59■□□□□ 0.57
UBXN1-218ENST00000616865 CD209Q9NNX6 404 aa18.59■□□□□ 0.57
UBXN1-218ENST00000616865 ALDH1L1O75891 902 aa18.58■□□□□ 0.56
UBXN1-218ENST00000616865 PRKG1Q13976 671 aa18.58■□□□□ 0.56
UBXN1-218ENST00000616865 BEND3Q5T5X7 828 aa18.58■□□□□ 0.56
UBXN1-218ENST00000616865 SSC5DA1L4H1 1573 aa18.58■□□□□ 0.56
UBXN1-218ENST00000616865 ANKRD18BA2A2Z9 1011 aa18.57■□□□□ 0.56
UBXN1-218ENST00000616865 GPR25O00155 361 aa18.57■□□□□ 0.56
UBXN1-218ENST00000616865 LDLRAD1Q5T700 205 aa18.57■□□□□ 0.56
UBXN1-218ENST00000616865 TMEM57Q8N5G2 664 aa18.57■□□□□ 0.56
UBXN1-218ENST00000616865 CFHR5Q9BXR6 569 aa18.57■□□□□ 0.56
UBXN1-218ENST00000616865 ANGEL1Q9UNK9 670 aaKnown RBP18.57■□□□□ 0.56
UBXN1-218ENST00000616865 PDE4DIPQ5VU43 2346 aa18.56■□□□□ 0.56
UBXN1-218ENST00000616865 INTS3Q68E01 1043 aaKnown RBP18.56■□□□□ 0.56
UBXN1-218ENST00000616865 C15orf52Q6ZUT6 534 aaKnown RBP18.56■□□□□ 0.56
UBXN1-218ENST00000616865 CERS5Q8N5B7 392 aa18.56■□□□□ 0.56
UBXN1-218ENST00000616865 C9orf78Q9NZ63 289 aaPredicted RBP18.56■□□□□ 0.56
UBXN1-218ENST00000616865 ARAP2Q8WZ64 1704 aa18.56■□□□□ 0.56
UBXN1-218ENST00000616865 SNAP23O00161 211 aa18.55■□□□□ 0.56
UBXN1-218ENST00000616865 TAF5LO75529 589 aa18.55■□□□□ 0.56
UBXN1-218ENST00000616865 NEFLP07196 543 aa18.55■□□□□ 0.56
UBXN1-218ENST00000616865 RLBP1P12271 317 aa18.55■□□□□ 0.56
UBXN1-218ENST00000616865 DLGAP5Q15398 846 aa18.55■□□□□ 0.56
UBXN1-218ENST00000616865 SPRYD7Q5W111 196 aa18.55■□□□□ 0.56
UBXN1-218ENST00000616865 MTMR14Q8NCE2 650 aa18.55■□□□□ 0.56
UBXN1-218ENST00000616865 DEFB129Q9H1M3 183 aa18.55■□□□□ 0.56
UBXN1-218ENST00000616865 FZD1Q9UP38 647 aa18.55■□□□□ 0.56
UBXN1-218ENST00000616865 COG6Q9Y2V7 657 aa18.55■□□□□ 0.56
UBXN1-218ENST00000616865 FOXO4P98177 505 aa18.54■□□□□ 0.56
UBXN1-218ENST00000616865 IFIT5Q13325 482 aaKnown RBP18.54■□□□□ 0.56
UBXN1-218ENST00000616865 MAP3K11Q16584 847 aa18.54■□□□□ 0.56
UBXN1-218ENST00000616865 C20orf194Q5TEA3 1177 aa18.54■□□□□ 0.56
UBXN1-218ENST00000616865 CHMP4BQ9H444 224 aaKnown RBP18.54■□□□□ 0.56
UBXN1-218ENST00000616865 PPP2R3BQ9Y5P8 575 aa18.54■□□□□ 0.56
UBXN1-218ENST00000616865 OTOFQ9HC10 1997 aa18.53■□□□□ 0.56
UBXN1-218ENST00000616865 FKTNO75072 461 aa18.53■□□□□ 0.56
UBXN1-218ENST00000616865 IL1R1P14778 569 aa18.53■□□□□ 0.56
UBXN1-218ENST00000616865 MVPQ14764 893 aaKnown RBP18.53■□□□□ 0.56
UBXN1-218ENST00000616865 FBXO46Q6PJ61 603 aaPredicted RBP18.53■□□□□ 0.56
UBXN1-218ENST00000616865 ZNF804AQ7Z570 1209 aa18.53■□□□□ 0.56
UBXN1-218ENST00000616865 HELBQ8NG08 1087 aaPredicted RBP18.53■□□□□ 0.56
UBXN1-218ENST00000616865 CHMP3Q9Y3E7 222 aa18.53■□□□□ 0.56
UBXN1-218ENST00000616865 ALDH1A1P00352 501 aa18.52■□□□□ 0.56
UBXN1-218ENST00000616865 FKBP1AP62942 108 aaKnown RBP18.52■□□□□ 0.56
UBXN1-218ENST00000616865 R3HDMLQ9H3Y0 253 aa18.52■□□□□ 0.56
UBXN1-218ENST00000616865 DDX19BQ9UMR2 479 aa18.52■□□□□ 0.56
UBXN1-218ENST00000616865 PCDHAC2Q9Y5I4 1007 aa18.52■□□□□ 0.56
UBXN1-218ENST00000616865 SPDYE2BA6NHP3 402 aa18.51■□□□□ 0.55
UBXN1-218ENST00000616865 MANSC4A6NHS7 340 aaPredicted RBP18.51■□□□□ 0.55
UBXN1-218ENST00000616865 F8W031 263 aaPredicted RBP18.51■□□□□ 0.55
UBXN1-218ENST00000616865 GRM8O00222 908 aa18.51■□□□□ 0.55
UBXN1-218ENST00000616865 MYO1BO43795 1136 aa18.51■□□□□ 0.55
UBXN1-218ENST00000616865 PPP1R12BO60237 982 aaPredicted RBP18.51■□□□□ 0.55
UBXN1-218ENST00000616865 GNAI3P08754 354 aa18.51■□□□□ 0.55
UBXN1-218ENST00000616865 SPDYE6P0CI01 402 aa18.51■□□□□ 0.55
UBXN1-218ENST00000616865 ZBTB48P10074 688 aaPredicted RBP18.51■□□□□ 0.55
UBXN1-218ENST00000616865 CFAP100Q494V2 611 aa18.51■□□□□ 0.55
UBXN1-218ENST00000616865 PRPF38BQ5VTL8 546 aaKnown RBP18.51■□□□□ 0.55
UBXN1-218ENST00000616865 HDAC5Q9UQL6 1122 aa18.51■□□□□ 0.55
UBXN1-218ENST00000616865 HTTP42858 3142 aa18.5■□□□□ 0.55
UBXN1-218ENST00000616865 CLRN2A0PK11 232 aa18.5■□□□□ 0.55
UBXN1-218ENST00000616865 UBTFL1P0CB47 393 aaPredicted RBP18.5■□□□□ 0.55
UBXN1-218ENST00000616865 IRX6P78412 446 aaPredicted RBP18.5■□□□□ 0.55
UBXN1-218ENST00000616865 WNK4Q96J92 1243 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms