RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 BCL2L12Q9HB09 334 aa18.44■□□□□ 0.54
SEMA3B-212ENST00000616701 EP400Q96L91 3159 aa18.44■□□□□ 0.54
SEMA3B-212ENST00000616701 SPEF2Q9C093 1822 aa18.44■□□□□ 0.54
SEMA3B-212ENST00000616701 PHF14O94880 888 aa18.44■□□□□ 0.54
SEMA3B-212ENST00000616701 FGAP02671 866 aa18.44■□□□□ 0.54
SEMA3B-212ENST00000616701 FOSBP53539 338 aa18.44■□□□□ 0.54
SEMA3B-212ENST00000616701 DDX11Q96FC9 970 aa18.44■□□□□ 0.54
SEMA3B-212ENST00000616701 GPHNQ9NQX3 736 aaPredicted RBP18.44■□□□□ 0.54
SEMA3B-212ENST00000616701 AKAP11Q9UKA4 1901 aa18.43■□□□□ 0.54
SEMA3B-212ENST00000616701 FIBPO43427 364 aa18.43■□□□□ 0.54
SEMA3B-212ENST00000616701 BRD2P25440 801 aaKnown RBP18.43■□□□□ 0.54
SEMA3B-212ENST00000616701 CHRNDQ07001 517 aa18.43■□□□□ 0.54
SEMA3B-212ENST00000616701 ZSCAN23Q3MJ62 389 aa18.43■□□□□ 0.54
SEMA3B-212ENST00000616701 FAM173BQ6P4H8 233 aa18.43■□□□□ 0.54
SEMA3B-212ENST00000616701 AK7Q96M32 723 aa18.43■□□□□ 0.54
SEMA3B-212ENST00000616701 TMEM63CQ9P1W3 806 aa18.43■□□□□ 0.54
SEMA3B-212ENST00000616701 ZFYP08048 801 aaPredicted RBP18.43■□□□□ 0.54
SEMA3B-212ENST00000616701 RASGRF1Q13972 1273 aa18.43■□□□□ 0.54
SEMA3B-212ENST00000616701 LRRFIP1Q32MZ4 808 aaKnown RBP18.43■□□□□ 0.54
SEMA3B-212ENST00000616701 TAF1P21675 1872 aa18.43■□□□□ 0.54
SEMA3B-212ENST00000616701 DDX60Q8IY21 1712 aaKnown RBP18.43■□□□□ 0.54
SEMA3B-212ENST00000616701 ZNF532Q9HCE3 1301 aa18.43■□□□□ 0.54
SEMA3B-212ENST00000616701 ADD2P35612 726 aa18.42■□□□□ 0.54
SEMA3B-212ENST00000616701 DHX32Q7L7V1 743 aaKnown RBP18.42■□□□□ 0.54
SEMA3B-212ENST00000616701 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.42■□□□□ 0.54
SEMA3B-212ENST00000616701 APPP05067 770 aa18.42■□□□□ 0.54
SEMA3B-212ENST00000616701 CCT2P78371 535 aaKnown RBP18.42■□□□□ 0.54
SEMA3B-212ENST00000616701 CDC37L1Q7L3B6 337 aa18.42■□□□□ 0.54
SEMA3B-212ENST00000616701 ANP32BQ92688 251 aaKnown RBP18.42■□□□□ 0.54
SEMA3B-212ENST00000616701 AFF2P51816 1311 aa18.42■□□□□ 0.54
SEMA3B-212ENST00000616701 COL5A3P25940 1745 aaPredicted RBP18.42■□□□□ 0.54
SEMA3B-212ENST00000616701 DNM1Q05193 864 aaKnown RBP18.42■□□□□ 0.54
SEMA3B-212ENST00000616701 SPATA5Q8NB90 893 aa18.42■□□□□ 0.54
SEMA3B-212ENST00000616701 SECISBP2LQ93073 1101 aaKnown RBP18.42■□□□□ 0.54
SEMA3B-212ENST00000616701 GJD4Q96KN9 370 aaPredicted RBP18.42■□□□□ 0.54
SEMA3B-212ENST00000616701 RREB1Q92766 1687 aa18.42■□□□□ 0.54
SEMA3B-212ENST00000616701 TPM2P07951 284 aa18.41■□□□□ 0.54
SEMA3B-212ENST00000616701 ARID4AP29374 1257 aaPredicted RBP18.41■□□□□ 0.54
SEMA3B-212ENST00000616701 TMEM51Q9NW97 253 aa18.41■□□□□ 0.54
SEMA3B-212ENST00000616701 DENND2AQ9ULE3 1009 aa18.41■□□□□ 0.54
SEMA3B-212ENST00000616701 PDE6AP16499 860 aa18.41■□□□□ 0.54
SEMA3B-212ENST00000616701 RAB11FIP4Q86YS3 637 aa18.41■□□□□ 0.54
SEMA3B-212ENST00000616701 ALDH8A1Q9H2A2 487 aaPredicted RBP18.41■□□□□ 0.54
SEMA3B-212ENST00000616701 MRE11P49959 708 aa18.4■□□□□ 0.54
SEMA3B-212ENST00000616701 SCRN1Q12765 414 aa18.4■□□□□ 0.54
SEMA3B-212ENST00000616701 CLEC4GQ6UXB4 293 aa18.4■□□□□ 0.54
SEMA3B-212ENST00000616701 GTF3C6Q969F1 213 aa18.4■□□□□ 0.54
SEMA3B-212ENST00000616701 NCOA5Q9HCD5 579 aaKnown RBP18.4■□□□□ 0.54
SEMA3B-212ENST00000616701 LAMA4Q16363 1823 aa18.4■□□□□ 0.54
SEMA3B-212ENST00000616701 SPATA31A6Q5VVP1 1343 aa18.4■□□□□ 0.54
SEMA3B-212ENST00000616701 ABCC12Q96J65 1359 aa18.4■□□□□ 0.54
SEMA3B-212ENST00000616701 UQCRFS1P1P0C7P4 283 aa18.4■□□□□ 0.54
SEMA3B-212ENST00000616701 CNTNAP4Q9C0A0 1308 aa18.4■□□□□ 0.54
SEMA3B-212ENST00000616701 ZPR1O75312 459 aa18.39■□□□□ 0.54
SEMA3B-212ENST00000616701 MAGEB6Q8N7X4 407 aa18.39■□□□□ 0.54
SEMA3B-212ENST00000616701 CELF1Q92879 486 aaKnown RBP18.39■□□□□ 0.54
SEMA3B-212ENST00000616701 SYCE3A1L190 88 aa18.39■□□□□ 0.53
SEMA3B-212ENST00000616701 EXOSC10Q01780 885 aaKnown RBP18.39■□□□□ 0.53
SEMA3B-212ENST00000616701 TTF1Q15361 905 aaPredicted RBP18.39■□□□□ 0.53
SEMA3B-212ENST00000616701 IMMTQ16891 758 aaKnown RBP18.39■□□□□ 0.53
SEMA3B-212ENST00000616701 BTAF1O14981 1849 aa18.39■□□□□ 0.53
SEMA3B-212ENST00000616701 GYG1P46976 350 aa18.39■□□□□ 0.53
SEMA3B-212ENST00000616701 RPS6KA4O75676 772 aa18.38■□□□□ 0.53
SEMA3B-212ENST00000616701 NBPF5PQ86XG9 351 aaPredicted RBP18.38■□□□□ 0.53
SEMA3B-212ENST00000616701 ANKRD18AQ8IVF6 992 aa18.38■□□□□ 0.53
SEMA3B-212ENST00000616701 NKX2-3Q8TAU0 364 aa18.38■□□□□ 0.53
SEMA3B-212ENST00000616701 ARHGEF1Q92888 912 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-212ENST00000616701 ZNF512BQ96KM6 892 aaPredicted RBP18.38■□□□□ 0.53
SEMA3B-212ENST00000616701 SETDB2Q96T68 719 aa18.38■□□□□ 0.53
SEMA3B-212ENST00000616701 LRP5O75197 1615 aa18.38■□□□□ 0.53
SEMA3B-212ENST00000616701 SEPT12Q8IYM1 358 aa18.38■□□□□ 0.53
SEMA3B-212ENST00000616701 CERKQ8TCT0 537 aa18.38■□□□□ 0.53
SEMA3B-212ENST00000616701 CDC5LQ99459 802 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-212ENST00000616701 RTCBQ9Y3I0 505 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-212ENST00000616701 HMGB1P09429 215 aaKnown RBP18.37■□□□□ 0.53
SEMA3B-212ENST00000616701 ZSCAN25Q6NSZ9 544 aa18.37■□□□□ 0.53
SEMA3B-212ENST00000616701 NARFQ9UHQ1 456 aa18.37■□□□□ 0.53
SEMA3B-212ENST00000616701 CTNNA3Q9UI47 895 aa18.37■□□□□ 0.53
SEMA3B-212ENST00000616701 NPHP1O15259 732 aa18.37■□□□□ 0.53
SEMA3B-212ENST00000616701 SLC51AQ86UW1 340 aa18.37■□□□□ 0.53
SEMA3B-212ENST00000616701 INCENPQ9NQS7 918 aa18.37■□□□□ 0.53
SEMA3B-212ENST00000616701 MYH7P12883 1935 aa18.37■□□□□ 0.53
SEMA3B-212ENST00000616701 ZNF213O14771 459 aa18.36■□□□□ 0.53
SEMA3B-212ENST00000616701 STK11IPQ8N1F8 1099 aa18.36■□□□□ 0.53
SEMA3B-212ENST00000616701 AIDAQ96BJ3 306 aa18.36■□□□□ 0.53
SEMA3B-212ENST00000616701 ARMT1Q9H993 441 aa18.36■□□□□ 0.53
SEMA3B-212ENST00000616701 TCRBV5S4A2TA0A5A2 114 aa18.36■□□□□ 0.53
SEMA3B-212ENST00000616701 PPP4R3BQ5MIZ7 849 aa18.36■□□□□ 0.53
SEMA3B-212ENST00000616701 BCORQ6W2J9 1755 aa18.35■□□□□ 0.53
SEMA3B-212ENST00000616701 ESPNB1AK53 854 aa18.35■□□□□ 0.53
SEMA3B-212ENST00000616701 MBD4O95243 580 aa18.35■□□□□ 0.53
SEMA3B-212ENST00000616701 MBD3O95983 291 aa18.35■□□□□ 0.53
SEMA3B-212ENST00000616701 TICAM2Q86XR7 235 aa18.35■□□□□ 0.53
SEMA3B-212ENST00000616701 MIGA1Q8NAN2 632 aa18.35■□□□□ 0.53
SEMA3B-212ENST00000616701 ABCF2Q9UG63 623 aa18.35■□□□□ 0.53
SEMA3B-212ENST00000616701 TAOK2Q9UL54 1235 aa18.35■□□□□ 0.53
SEMA3B-212ENST00000616701 UBE3CQ15386 1083 aa18.35■□□□□ 0.53
SEMA3B-212ENST00000616701 FAM196AQ6ZSG2 479 aa18.35■□□□□ 0.53
SEMA3B-212ENST00000616701 SMAP1Q8IYB5 467 aaPredicted RBP18.35■□□□□ 0.53
SEMA3B-212ENST00000616701 NBPF3Q9H094 633 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms