RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 OTUD7BQ6GQQ9 843 aa15.28■□□□□ 0.04
PPP4R3B-206ENST00000616407 CRNKL1Q9BZJ0 848 aaKnown RBP15.28■□□□□ 0.04
PPP4R3B-206ENST00000616407 ARMT1Q9H993 441 aa15.28■□□□□ 0.04
PPP4R3B-206ENST00000616407 MTMR6Q9Y217 621 aa15.28■□□□□ 0.04
PPP4R3B-206ENST00000616407 RTCBQ9Y3I0 505 aaKnown RBP15.28■□□□□ 0.04
PPP4R3B-206ENST00000616407 CEP170BQ9Y4F5 1589 aaPredicted RBP15.28■□□□□ 0.04
PPP4R3B-206ENST00000616407 TMTC2Q8N394 836 aa15.28■□□□□ 0.04
PPP4R3B-206ENST00000616407 JAG2Q9Y219 1238 aa15.28■□□□□ 0.04
PPP4R3B-206ENST00000616407 GNPATO15228 680 aa15.27■□□□□ 0.04
PPP4R3B-206ENST00000616407 NLRP5P59047 1200 aa15.27■□□□□ 0.04
PPP4R3B-206ENST00000616407 ZSCAN29Q8IWY8 852 aaPredicted RBP15.27■□□□□ 0.04
PPP4R3B-206ENST00000616407 ZNF287Q9HBT7 754 aa15.27■□□□□ 0.04
PPP4R3B-206ENST00000616407 SPTLC2O15270 562 aa15.27■□□□□ 0.03
PPP4R3B-206ENST00000616407 PDE4BQ07343 736 aa15.27■□□□□ 0.03
PPP4R3B-206ENST00000616407 CCDC24Q8N4L8 307 aa15.27■□□□□ 0.03
PPP4R3B-206ENST00000616407 ZNF532Q9HCE3 1301 aa15.27■□□□□ 0.03
PPP4R3B-206ENST00000616407 GNAT2P19087 354 aa15.27■□□□□ 0.03
PPP4R3B-206ENST00000616407 CDK5RAP3Q96JB5 506 aa15.27■□□□□ 0.03
PPP4R3B-206ENST00000616407 LLPHQ9BRT6 129 aaKnown RBP15.27■□□□□ 0.03
PPP4R3B-206ENST00000616407 H7C1W4 665 aa15.26■□□□□ 0.03
PPP4R3B-206ENST00000616407 CBFA2T2O43439 604 aa15.26■□□□□ 0.03
PPP4R3B-206ENST00000616407 CYP21A2P08686 494 aa15.26■□□□□ 0.03
PPP4R3B-206ENST00000616407 KLHL10Q6JEL2 608 aa15.26■□□□□ 0.03
PPP4R3B-206ENST00000616407 MNS1Q8NEH6 495 aa15.26■□□□□ 0.03
PPP4R3B-206ENST00000616407 GTF3C6Q969F1 213 aa15.26■□□□□ 0.03
PPP4R3B-206ENST00000616407 TTC12Q9H892 705 aaPredicted RBP15.26■□□□□ 0.03
PPP4R3B-206ENST00000616407 RRAGDQ9NQL2 400 aaPredicted RBP15.26■□□□□ 0.03
PPP4R3B-206ENST00000616407 SYKP43405 635 aa15.26■□□□□ 0.03
PPP4R3B-206ENST00000616407 SPTY2D1Q68D10 685 aaPredicted RBP15.26■□□□□ 0.03
PPP4R3B-206ENST00000616407 MYO5BQ9ULV0 1848 aa15.26■□□□□ 0.03
PPP4R3B-206ENST00000616407 ADGRB2O60241 1585 aa15.26■□□□□ 0.03
PPP4R3B-206ENST00000616407 BAG3O95817 575 aa15.26■□□□□ 0.03
PPP4R3B-206ENST00000616407 IFIT1BQ5T764 474 aaKnown RBP15.26■□□□□ 0.03
PPP4R3B-206ENST00000616407 NYXQ9GZU5 481 aa15.26■□□□□ 0.03
PPP4R3B-206ENST00000616407 CAVIN2O95810 425 aa15.25■□□□□ 0.03
PPP4R3B-206ENST00000616407 LDHCP07864 332 aa15.25■□□□□ 0.03
PPP4R3B-206ENST00000616407 LEO1Q8WVC0 666 aaPredicted RBP15.25■□□□□ 0.03
PPP4R3B-206ENST00000616407 NECTIN1Q15223 517 aa15.25■□□□□ 0.03
PPP4R3B-206ENST00000616407 SPATA5Q8NB90 893 aa15.25■□□□□ 0.03
PPP4R3B-206ENST00000616407 ANGEL1Q9UNK9 670 aaKnown RBP15.25■□□□□ 0.03
PPP4R3B-206ENST00000616407 CEMIPQ8WUJ3 1361 aa15.25■□□□□ 0.03
PPP4R3B-206ENST00000616407 CCDC102BQ68D86 513 aa15.25■□□□□ 0.03
PPP4R3B-206ENST00000616407 GPR108Q9NPR9 543 aa15.25■□□□□ 0.03
PPP4R3B-206ENST00000616407 STX8Q9UNK0 236 aa15.25■□□□□ 0.03
PPP4R3B-206ENST00000616407 ZKSCAN5Q9Y2L8 839 aa15.25■□□□□ 0.03
PPP4R3B-206ENST00000616407 LARGE1O95461 756 aa15.24■□□□□ 0.03
PPP4R3B-206ENST00000616407 CCDC112Q8NEF3 446 aa15.24■□□□□ 0.03
PPP4R3B-206ENST00000616407 FGAP02671 866 aa15.24■□□□□ 0.03
PPP4R3B-206ENST00000616407 SFPQP23246 707 aaKnown RBP eCLIP15.24■□□□□ 0.03
PPP4R3B-206ENST00000616407 FAM177A1Q8N128 213 aaPredicted RBP15.24■□□□□ 0.03
PPP4R3B-206ENST00000616407 MROH5Q6ZUA9 1318 aa15.24■□□□□ 0.03
PPP4R3B-206ENST00000616407 CIAO1O76071 339 aa15.24■□□□□ 0.03
PPP4R3B-206ENST00000616407 LUZP1Q86V48 1076 aa15.24■□□□□ 0.03
PPP4R3B-206ENST00000616407 KLHL34Q8N239 644 aa15.24■□□□□ 0.03
PPP4R3B-206ENST00000616407 KAT14Q9H8E8 782 aa15.24■□□□□ 0.03
PPP4R3B-206ENST00000616407 TNS3Q68CZ2 1445 aa15.24■□□□□ 0.03
PPP4R3B-206ENST00000616407 ITSN1Q15811 1721 aa15.24■□□□□ 0.03
PPP4R3B-206ENST00000616407 KIF20BQ96Q89 1820 aa15.23■□□□□ 0.03
PPP4R3B-206ENST00000616407 FSD2A1L4K1 749 aa15.23■□□□□ 0.03
PPP4R3B-206ENST00000616407 PPFIBP1Q86W92 1011 aa15.23■□□□□ 0.03
PPP4R3B-206ENST00000616407 FBXO3Q9UK99 471 aa15.23■□□□□ 0.03
PPP4R3B-206ENST00000616407 NSFL1CQ9UNZ2 370 aaKnown RBP15.23■□□□□ 0.03
PPP4R3B-206ENST00000616407 LOC102724428A0A0B4J2F2 783 aa15.23■□□□□ 0.03
PPP4R3B-206ENST00000616407 SIK1P57059 783 aa15.23■□□□□ 0.03
PPP4R3B-206ENST00000616407 ZMYM1Q5SVZ6 1142 aa15.23■□□□□ 0.03
PPP4R3B-206ENST00000616407 PI16Q6UXB8 463 aa15.23■□□□□ 0.03
PPP4R3B-206ENST00000616407 A0A1B0GVL5 298 aa15.23■□□□□ 0.03
PPP4R3B-206ENST00000616407 NBPF26B4DH59 902 aa15.23■□□□□ 0.03
PPP4R3B-206ENST00000616407 NBPF14Q5TI25 921 aa15.23■□□□□ 0.03
PPP4R3B-206ENST00000616407 NBPF10Q6P3W6 841 aaKnown RBP15.23■□□□□ 0.03
PPP4R3B-206ENST00000616407 CCDC186Q7Z3E2 898 aa15.23■□□□□ 0.03
PPP4R3B-206ENST00000616407 NBPF15Q8N660 670 aa15.23■□□□□ 0.03
PPP4R3B-206ENST00000616407 MYL10Q9BUA6 226 aa15.23■□□□□ 0.03
PPP4R3B-206ENST00000616407 CTDP1Q9Y5B0 961 aaPredicted RBP15.23■□□□□ 0.03
PPP4R3B-206ENST00000616407 PDE8BO95263 885 aa15.22■□□□□ 0.03
PPP4R3B-206ENST00000616407 KIF5BP33176 963 aa15.22■□□□□ 0.03
PPP4R3B-206ENST00000616407 CCNL1Q9UK58 526 aaPredicted RBP15.22■□□□□ 0.03
PPP4R3B-206ENST00000616407 CCDC194A0A1B0GVG4 234 aa15.22■□□□□ 0.03
PPP4R3B-206ENST00000616407 MPHOSPH10O00566 681 aaKnown RBP15.22■□□□□ 0.03
PPP4R3B-206ENST00000616407 PHKA1P46020 1223 aa15.22■□□□□ 0.03
PPP4R3B-206ENST00000616407 BRAPQ7Z569 592 aa15.22■□□□□ 0.03
PPP4R3B-206ENST00000616407 NLRP10Q86W26 655 aa15.22■□□□□ 0.03
PPP4R3B-206ENST00000616407 MAGEC2Q9UBF1 373 aaPredicted RBP15.22■□□□□ 0.03
PPP4R3B-206ENST00000616407 ZNF219Q9P2Y4 722 aaPredicted RBP15.22■□□□□ 0.03
PPP4R3B-206ENST00000616407 IL6STP40189 918 aaPredicted RBP15.22■□□□□ 0.03
PPP4R3B-206ENST00000616407 CTDSPL2Q05D32 466 aa15.22■□□□□ 0.03
PPP4R3B-206ENST00000616407 TMEM87BQ96K49 555 aa15.22■□□□□ 0.03
PPP4R3B-206ENST00000616407 VAT1LQ9HCJ6 419 aa15.22■□□□□ 0.03
PPP4R3B-206ENST00000616407 IFT172Q9UG01 1749 aa15.21■□□□□ 0.03
PPP4R3B-206ENST00000616407 DHX8Q14562 1220 aaKnown RBP15.21■□□□□ 0.03
PPP4R3B-206ENST00000616407 SLFNL1Q499Z3 407 aa15.21■□□□□ 0.03
PPP4R3B-206ENST00000616407 SEC63Q9UGP8 760 aaKnown RBP15.21■□□□□ 0.03
PPP4R3B-206ENST00000616407 PRKCSHP14314 528 aaPredicted RBP15.21■□□□□ 0.03
PPP4R3B-206ENST00000616407 PDE6AP16499 860 aa15.21■□□□□ 0.03
PPP4R3B-206ENST00000616407 STIM1Q13586 685 aa15.21■□□□□ 0.03
PPP4R3B-206ENST00000616407 MCM9Q9NXL9 1143 aa15.21■□□□□ 0.03
PPP4R3B-206ENST00000616407 PRDM1O75626 825 aa15.21■□□□□ 0.02
PPP4R3B-206ENST00000616407 CRKLP46109 303 aaKnown RBP15.21■□□□□ 0.02
PPP4R3B-206ENST00000616407 PHKBQ93100 1093 aa15.21■□□□□ 0.02
PPP4R3B-206ENST00000616407 TRMT1Q9NXH9 659 aaKnown RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 397.5 ms