RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 MKRN1Q9UHC7 482 aaKnown RBP21.2■□□□□ 0.98
LHX1-202ENST00000616237 IQSEC3Q9UPP2 1182 aaPredicted RBP21.2■□□□□ 0.98
LHX1-202ENST00000616237 PCNTO95613 3336 aa21.19■□□□□ 0.98
LHX1-202ENST00000616237 ADM5C9JUS6 153 aa21.19■□□□□ 0.98
LHX1-202ENST00000616237 FKBP1AP62942 108 aaKnown RBP21.19■□□□□ 0.98
LHX1-202ENST00000616237 OGFOD1Q8N543 542 aa21.19■□□□□ 0.98
LHX1-202ENST00000616237 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.19■□□□□ 0.98
LHX1-202ENST00000616237 TRPM7Q96QT4 1865 aa21.18■□□□□ 0.98
LHX1-202ENST00000616237 WNT10BO00744 389 aa21.18■□□□□ 0.98
LHX1-202ENST00000616237 IFIT1P09914 478 aaKnown RBP21.18■□□□□ 0.98
LHX1-202ENST00000616237 ANGEL2Q5VTE6 544 aaKnown RBP21.18■□□□□ 0.98
LHX1-202ENST00000616237 KRT26Q7Z3Y9 468 aa21.18■□□□□ 0.98
LHX1-202ENST00000616237 JMYQ8N9B5 988 aa21.18■□□□□ 0.98
LHX1-202ENST00000616237 LPIN2Q92539 896 aa21.18■□□□□ 0.98
LHX1-202ENST00000616237 DCPSQ96C86 337 aaKnown RBP21.18■□□□□ 0.98
LHX1-202ENST00000616237 CEP126Q9P2H0 1117 aa21.18■□□□□ 0.98
LHX1-202ENST00000616237 F8W031 263 aaPredicted RBP21.17■□□□□ 0.98
LHX1-202ENST00000616237 CELF2O95319 508 aaKnown RBP21.17■□□□□ 0.98
LHX1-202ENST00000616237 CAVIN4Q5BKX8 364 aa21.17■□□□□ 0.98
LHX1-202ENST00000616237 ZBED3Q96IU2 234 aaPredicted RBP21.17■□□□□ 0.98
LHX1-202ENST00000616237 SCAF8Q9UPN6 1271 aaKnown RBP21.17■□□□□ 0.98
LHX1-202ENST00000616237 PCDHAC2Q9Y5I4 1007 aa21.17■□□□□ 0.98
LHX1-202ENST00000616237 CNTNAP1P78357 1384 aa21.17■□□□□ 0.98
LHX1-202ENST00000616237 SLC5A1P13866 664 aa21.16■□□□□ 0.98
LHX1-202ENST00000616237 POLA2Q14181 598 aa21.16■□□□□ 0.98
LHX1-202ENST00000616237 GRIK5Q16478 980 aa21.16■□□□□ 0.98
LHX1-202ENST00000616237 ATP2B3Q16720 1220 aa21.16■□□□□ 0.98
LHX1-202ENST00000616237 VPS37DQ86XT2 251 aa21.16■□□□□ 0.98
LHX1-202ENST00000616237 MMP14P50281 582 aa21.15■□□□□ 0.98
LHX1-202ENST00000616237 ATP8B2P98198 1209 aa21.15■□□□□ 0.98
LHX1-202ENST00000616237 MFSD14BQ5SR56 506 aa21.15■□□□□ 0.98
LHX1-202ENST00000616237 HDAC9Q9UKV0 1011 aa21.15■□□□□ 0.98
LHX1-202ENST00000616237 RASSF10A6NK89 507 aa21.14■□□□□ 0.98
LHX1-202ENST00000616237 TFCP2Q12800 502 aa21.14■□□□□ 0.98
LHX1-202ENST00000616237 ZNF408Q9H9D4 720 aa21.14■□□□□ 0.98
LHX1-202ENST00000616237 PITPNM2Q9BZ72 1349 aa21.14■□□□□ 0.97
LHX1-202ENST00000616237 ADORA1P30542 326 aa21.13■□□□□ 0.97
LHX1-202ENST00000616237 CHAF1AQ13111 956 aaPredicted RBP21.13■□□□□ 0.97
LHX1-202ENST00000616237 SULF1Q8IWU6 871 aa21.13■□□□□ 0.97
LHX1-202ENST00000616237 SSH3Q8TE77 659 aa21.13■□□□□ 0.97
LHX1-202ENST00000616237 ABT1Q9ULW3 272 aaKnown RBP21.13■□□□□ 0.97
LHX1-202ENST00000616237 TLL2Q9Y6L7 1015 aa21.13■□□□□ 0.97
LHX1-202ENST00000616237 AOX1Q06278 1338 aa21.13■□□□□ 0.97
LHX1-202ENST00000616237 COL1A1P02452 1464 aaPredicted RBP21.13■□□□□ 0.97
LHX1-202ENST00000616237 VEGFBP49765 207 aa21.12■□□□□ 0.97
LHX1-202ENST00000616237 TIMM10P62072 90 aa21.12■□□□□ 0.97
LHX1-202ENST00000616237 MVPQ14764 893 aaKnown RBP21.12■□□□□ 0.97
LHX1-202ENST00000616237 MTMR14Q8NCE2 650 aa21.12■□□□□ 0.97
LHX1-202ENST00000616237 COG6Q9Y2V7 657 aa21.12■□□□□ 0.97
LHX1-202ENST00000616237 MS4A1P11836 297 aa21.11■□□□□ 0.97
LHX1-202ENST00000616237 PHKA1P46020 1223 aa21.11■□□□□ 0.97
LHX1-202ENST00000616237 DEFB115Q30KQ5 88 aa21.11■□□□□ 0.97
LHX1-202ENST00000616237 CFAP100Q494V2 611 aa21.11■□□□□ 0.97
LHX1-202ENST00000616237 C20orf194Q5TEA3 1177 aa21.11■□□□□ 0.97
LHX1-202ENST00000616237 SAPCD2Q86UD0 394 aa21.11■□□□□ 0.97
LHX1-202ENST00000616237 CDCA5Q96FF9 252 aa21.11■□□□□ 0.97
LHX1-202ENST00000616237 YTHDC1Q96MU7 727 aaKnown RBP21.11■□□□□ 0.97
LHX1-202ENST00000616237 FRAT2O75474 233 aaPredicted RBP21.1■□□□□ 0.97
LHX1-202ENST00000616237 DLGAP5Q15398 846 aa21.1■□□□□ 0.97
LHX1-202ENST00000616237 CEP85Q6P2H3 762 aa21.1■□□□□ 0.97
LHX1-202ENST00000616237 PRMT6Q96LA8 375 aaPredicted RBP21.1■□□□□ 0.97
LHX1-202ENST00000616237 TTF2Q9UNY4 1162 aaKnown RBP21.1■□□□□ 0.97
LHX1-202ENST00000616237 ARAP2Q8WZ64 1704 aa21.1■□□□□ 0.97
LHX1-202ENST00000616237 A0A1B0GUL7 405 aa21.1■□□□□ 0.97
LHX1-202ENST00000616237 SPDYE2BA6NHP3 402 aa21.1■□□□□ 0.97
LHX1-202ENST00000616237 SPDYE6P0CI01 402 aa21.1■□□□□ 0.97
LHX1-202ENST00000616237 PRAMEF18Q5VWM3 479 aa21.1■□□□□ 0.97
LHX1-202ENST00000616237 G3BP1Q13283 466 aaKnown RBP eCLIP21.09■□□□□ 0.97
LHX1-202ENST00000616237 CCDC102BQ68D86 513 aa21.09■□□□□ 0.97
LHX1-202ENST00000616237 TBC1D22AQ8WUA7 517 aa21.09■□□□□ 0.97
LHX1-202ENST00000616237 XAGE2Q96GT9 111 aa21.08■□□□□ 0.96
LHX1-202ENST00000616237 ZBTB40Q9NUA8 1239 aa21.08■□□□□ 0.96
LHX1-202ENST00000616237 NOP58Q9Y2X3 529 aaKnown RBP21.08■□□□□ 0.96
LHX1-202ENST00000616237 CYP4F22Q6NT55 531 aa21.07■□□□□ 0.96
LHX1-202ENST00000616237 GBA2Q9HCG7 927 aaPredicted RBP21.07■□□□□ 0.96
LHX1-202ENST00000616237 SERPINA10Q9UK55 444 aa21.07■□□□□ 0.96
LHX1-202ENST00000616237 DDX19BQ9UMR2 479 aa21.07■□□□□ 0.96
LHX1-202ENST00000616237 AKAP2Q9Y2D5 859 aa21.07■□□□□ 0.96
LHX1-202ENST00000616237 CLRN2A0PK11 232 aa21.06■□□□□ 0.96
LHX1-202ENST00000616237 ZBTB22O15209 634 aa21.06■□□□□ 0.96
LHX1-202ENST00000616237 SURF6O75683 361 aaKnown RBP21.06■□□□□ 0.96
LHX1-202ENST00000616237 CRKP46108 304 aa21.06■□□□□ 0.96
LHX1-202ENST00000616237 PDE3AQ14432 1141 aa21.06■□□□□ 0.96
LHX1-202ENST00000616237 WDR33Q9C0J8 1336 aaKnown RBP21.06■□□□□ 0.96
LHX1-202ENST00000616237 RBM5P52756 815 aaKnown RBP eCLIP21.05■□□□□ 0.96
LHX1-202ENST00000616237 APOBEC3FQ8IUX4 373 aaKnown RBP21.05■□□□□ 0.96
LHX1-202ENST00000616237 WDR66Q8TBY9 1149 aa21.05■□□□□ 0.96
LHX1-202ENST00000616237 CAPNS2Q96L46 248 aa21.05■□□□□ 0.96
LHX1-202ENST00000616237 MYH13Q9UKX3 1938 aa21.05■□□□□ 0.96
LHX1-202ENST00000616237 HUNKP57058 714 aa21.04■□□□□ 0.96
LHX1-202ENST00000616237 SIRT2Q8IXJ6 389 aa21.04■□□□□ 0.96
LHX1-202ENST00000616237 HHIPL1Q96JK4 782 aa21.04■□□□□ 0.96
LHX1-202ENST00000616237 NEUROD6Q96NK8 337 aa21.04■□□□□ 0.96
LHX1-202ENST00000616237 GNL3LQ9NVN8 582 aaKnown RBP21.04■□□□□ 0.96
LHX1-202ENST00000616237 ECM29Q5VYK3 1845 aa21.03■□□□□ 0.96
LHX1-202ENST00000616237 SEMA3EO15041 775 aa21.03■□□□□ 0.96
LHX1-202ENST00000616237 HDLBPQ00341 1268 aaKnown RBP21.03■□□□□ 0.96
LHX1-202ENST00000616237 RASGRF1Q13972 1273 aa21.03■□□□□ 0.96
LHX1-202ENST00000616237 C2orf69Q8N8R5 385 aa21.03■□□□□ 0.96
LHX1-202ENST00000616237 TDRD3Q9H7E2 651 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms