RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, human

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-223	ENST00000616010	SPON1	Q9HCB6	807 aa		28.3	■■■□□ 2.12
CCND3-223	ENST00000616010	ANO2	Q9NQ90	1003 aa		28.3	■■■□□ 2.12
CCND3-223	ENST00000616010	CD2AP	Q9Y5K6	639 aa		28.3	■■■□□ 2.12
CCND3-223	ENST00000616010	LRRFIP1	Q32MZ4	808 aa	Known RBP	28.3	■■■□□ 2.12
CCND3-223	ENST00000616010	SLFNL1	Q499Z3	407 aa		28.3	■■■□□ 2.12
CCND3-223	ENST00000616010	TICAM2	Q86XR7	235 aa		28.3	■■■□□ 2.12
CCND3-223	ENST00000616010	C22orf23	Q9BZE7	217 aa		28.3	■■■□□ 2.12
CCND3-223	ENST00000616010	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	28.3	■■■□□ 2.12
CCND3-223	ENST00000616010	RAD50	Q92878	1312 aa		28.29	■■■□□ 2.12
CCND3-223	ENST00000616010	SNED1	Q8TER0	1413 aa		28.29	■■■□□ 2.12
CCND3-223	ENST00000616010	RNF113A	O15541	343 aa	Known RBP	28.28	■■■□□ 2.12
CCND3-223	ENST00000616010	PIM2	Q9P1W9	311 aa		28.28	■■■□□ 2.12
CCND3-223	ENST00000616010	WWC3	Q9ULE0	1092 aa		28.28	■■■□□ 2.12
CCND3-223	ENST00000616010	RIMBP2	O15034	1052 aa		28.28	■■■□□ 2.12
CCND3-223	ENST00000616010	WASHC4	Q2M389	1173 aa		28.28	■■■□□ 2.12
CCND3-223	ENST00000616010	CC2D2B	Q6DHV5	1058 aa		28.28	■■■□□ 2.12
CCND3-223	ENST00000616010	PDS5A	Q29RF7	1337 aa	Known RBP	28.28	■■■□□ 2.12
CCND3-223	ENST00000616010	CHAF1A	Q13111	956 aa	Predicted RBP	28.27	■■■□□ 2.12
CCND3-223	ENST00000616010	ZFY	P08048	801 aa	Predicted RBP	28.26	■■■□□ 2.12
CCND3-223	ENST00000616010	TDRD7	Q8NHU6	1098 aa	Known RBP	28.26	■■■□□ 2.12
CCND3-223	ENST00000616010	CD209	Q9NNX6	404 aa		28.26	■■■□□ 2.12
CCND3-223	ENST00000616010	SEC62	Q99442	399 aa	Known RBP	28.26	■■■□□ 2.11
CCND3-223	ENST00000616010	USP26	Q9BXU7	913 aa		28.26	■■■□□ 2.11
CCND3-223	ENST00000616010	ZC3H12C	Q9C0D7	883 aa	Known RBP	28.26	■■■□□ 2.11
CCND3-223	ENST00000616010	ABCF2	Q9UG63	623 aa		28.26	■■■□□ 2.11
CCND3-223	ENST00000616010	JAG2	Q9Y219	1238 aa		28.26	■■■□□ 2.11
CCND3-223	ENST00000616010	ZMYM1	Q5SVZ6	1142 aa		28.25	■■■□□ 2.11
CCND3-223	ENST00000616010	SLC9C2	Q5TAH2	1124 aa		28.25	■■■□□ 2.11
CCND3-223	ENST00000616010	ZSCAN25	Q6NSZ9	544 aa		28.25	■■■□□ 2.11
CCND3-223	ENST00000616010	ZNF589	Q86UQ0	364 aa	Predicted RBP	28.25	■■■□□ 2.11
CCND3-223	ENST00000616010	EYA3	Q99504	573 aa		28.25	■■■□□ 2.11
CCND3-223	ENST00000616010	ZBTB22	O15209	634 aa		28.25	■■■□□ 2.11
CCND3-223	ENST00000616010	MAP3K12	Q12852	859 aa		28.25	■■■□□ 2.11
CCND3-223	ENST00000616010	CCDC93	Q567U6	631 aa		28.25	■■■□□ 2.11
CCND3-223	ENST00000616010	LRP2BP	Q9P2M1	347 aa		28.25	■■■□□ 2.11
CCND3-223	ENST00000616010	IL1R1	P14778	569 aa		28.24	■■■□□ 2.11
CCND3-223	ENST00000616010	ADD2	P35612	726 aa		28.24	■■■□□ 2.11
CCND3-223	ENST00000616010	KIAA1211	Q6ZU35	1233 aa		28.24	■■■□□ 2.11
CCND3-223	ENST00000616010	RTFDC1	Q9BY42	306 aa	Predicted RBP	28.24	■■■□□ 2.11
CCND3-223	ENST00000616010	MCMDC2	Q4G0Z9	681 aa		28.23	■■■□□ 2.11
CCND3-223	ENST00000616010	HELLS	Q9NRZ9	838 aa		28.23	■■■□□ 2.11
CCND3-223	ENST00000616010	PDE6A	P16499	860 aa		28.23	■■■□□ 2.11
CCND3-223	ENST00000616010	DALRD3	Q5D0E6	543 aa	Known RBP	28.23	■■■□□ 2.11
CCND3-223	ENST00000616010	CCDC129	Q6ZRS4	1044 aa		28.23	■■■□□ 2.11
CCND3-223	ENST00000616010	MAST3	O60307	1309 aa		28.22	■■■□□ 2.11
CCND3-223	ENST00000616010	LSG1	Q9H089	658 aa	Known RBP	28.22	■■■□□ 2.11
CCND3-223	ENST00000616010	RBM25	P49756	843 aa	Known RBP	28.21	■■■□□ 2.11
CCND3-223	ENST00000616010	MAGEB6	Q8N7X4	407 aa		28.21	■■■□□ 2.11
CCND3-223	ENST00000616010	APPBP2	Q92624	585 aa		28.21	■■■□□ 2.11
CCND3-223	ENST00000616010	COA1	Q9GZY4	146 aa		28.21	■■■□□ 2.11
CCND3-223	ENST00000616010	ZNF532	Q9HCE3	1301 aa		28.21	■■■□□ 2.11
CCND3-223	ENST00000616010	OSBP2	Q969R2	916 aa		28.21	■■■□□ 2.11
CCND3-223	ENST00000616010	CHD4	Q14839	1912 aa		28.2	■■■□□ 2.11
CCND3-223	ENST00000616010		M0R2C6	588 aa		28.2	■■■□□ 2.11
CCND3-223	ENST00000616010	UBE3C	Q15386	1083 aa		28.2	■■■□□ 2.11
CCND3-223	ENST00000616010	GRIPAP1	Q4V328	841 aa		28.2	■■■□□ 2.11
CCND3-223	ENST00000616010	RTKN2	Q8IZC4	609 aa		28.2	■■■□□ 2.11
CCND3-223	ENST00000616010	NLGN2	Q8NFZ4	835 aa		28.2	■■■□□ 2.11
CCND3-223	ENST00000616010	RAI14	Q9P0K7	980 aa		28.2	■■■□□ 2.11
CCND3-223	ENST00000616010	MAST2	Q6P0Q8	1798 aa		28.2	■■■□□ 2.1
CCND3-223	ENST00000616010	CCDC171	Q6TFL3	1326 aa		28.2	■■■□□ 2.1
CCND3-223	ENST00000616010	DOK7	Q18PE1	504 aa		28.19	■■■□□ 2.1
CCND3-223	ENST00000616010	TCRBV5S4A2T	A0A5A2	114 aa		28.19	■■■□□ 2.1
CCND3-223	ENST00000616010	SOGA3	Q5TF21	947 aa		28.19	■■■□□ 2.1
CCND3-223	ENST00000616010	SUPT20H	Q8NEM7	779 aa		28.19	■■■□□ 2.1
CCND3-223	ENST00000616010	WDR66	Q8TBY9	1149 aa		28.19	■■■□□ 2.1
CCND3-223	ENST00000616010		G3V3G9	751 aa		28.18	■■■□□ 2.1
CCND3-223	ENST00000616010	PTH1R	Q03431	593 aa		28.18	■■■□□ 2.1
CCND3-223	ENST00000616010	DCAF8	Q5TAQ9	597 aa		28.18	■■■□□ 2.1
CCND3-223	ENST00000616010	PUS7L	Q9H0K6	701 aa	Known RBP	28.18	■■■□□ 2.1
CCND3-223	ENST00000616010	SALL1	Q9NSC2	1324 aa		28.18	■■■□□ 2.1
CCND3-223	ENST00000616010	ANP32A	P39687	249 aa	Known RBP	28.18	■■■□□ 2.1
CCND3-223	ENST00000616010	EPB41L2	O43491	1005 aa	Known RBP	28.17	■■■□□ 2.1
CCND3-223	ENST00000616010	PRDX5	P30044	214 aa		28.17	■■■□□ 2.1
CCND3-223	ENST00000616010	AOC3	Q16853	763 aa		28.17	■■■□□ 2.1
CCND3-223	ENST00000616010	ERICH6	Q7L0X2	663 aa		28.17	■■■□□ 2.1
CCND3-223	ENST00000616010	CCDC88A	Q3V6T2	1871 aa		28.17	■■■□□ 2.1
CCND3-223	ENST00000616010	ZGPAT	Q8N5A5	531 aa	Known RBP	28.16	■■■□□ 2.1
CCND3-223	ENST00000616010	DBNDD1	Q9H9R9	158 aa		28.16	■■■□□ 2.1
CCND3-223	ENST00000616010	PSMD1	Q99460	953 aa		28.16	■■■□□ 2.1
CCND3-223	ENST00000616010	BCS1L	Q9Y276	419 aa		28.16	■■■□□ 2.1
CCND3-223	ENST00000616010	MCC	P23508	829 aa		28.15	■■■□□ 2.1
CCND3-223	ENST00000616010	KIAA2012	Q0VF49	1180 aa		28.15	■■■□□ 2.1
CCND3-223	ENST00000616010	PPIP5K2	O43314	1243 aa		28.14	■■■□□ 2.09
CCND3-223	ENST00000616010	GPAA1	O43292	621 aa		28.13	■■■□□ 2.09
CCND3-223	ENST00000616010	GTF2I	P78347	998 aa		28.13	■■■□□ 2.09
CCND3-223	ENST00000616010	SPTY2D1	Q68D10	685 aa	Predicted RBP	28.13	■■■□□ 2.09
CCND3-223	ENST00000616010	FBXW7	Q969H0	707 aa		28.13	■■■□□ 2.09
CCND3-223	ENST00000616010	FHDC1	Q9C0D6	1143 aa	Predicted RBP	28.13	■■■□□ 2.09
CCND3-223	ENST00000616010	FER1L6	Q2WGJ9	1857 aa		28.13	■■■□□ 2.09
CCND3-223	ENST00000616010	CYP7A1	P22680	504 aa		28.13	■■■□□ 2.09
CCND3-223	ENST00000616010	MECOM	Q03112	1051 aa		28.13	■■■□□ 2.09
CCND3-223	ENST00000616010	NSUN4	Q96CB9	384 aa	Known RBP	28.13	■■■□□ 2.09
CCND3-223	ENST00000616010	FAM205A	Q6ZU69	1335 aa		28.12	■■■□□ 2.09
CCND3-223	ENST00000616010	ECE2	O60344	883 aa		28.12	■■■□□ 2.09
CCND3-223	ENST00000616010	LDHB	P07195	334 aa	Known RBP	28.12	■■■□□ 2.09
CCND3-223	ENST00000616010	MFSD14B	Q5SR56	506 aa		28.12	■■■□□ 2.09
CCND3-223	ENST00000616010	VPS53	Q5VIR6	699 aa		28.12	■■■□□ 2.09
CCND3-223	ENST00000616010	NAA16	Q6N069	864 aa	Predicted RBP	28.12	■■■□□ 2.09
CCND3-223	ENST00000616010	PODN	Q7Z5L7	613 aa		28.12	■■■□□ 2.09

Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms