RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 ARPP21Q9UBL0 812 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 ANXA1P04083 346 aa11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 EIF4A1P60842 406 aaKnown RBP11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 CCDC83Q8IWF9 413 aa11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 TAF4BQ92750 862 aa11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 DDX17Q92841 729 aaKnown RBP11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 ANO10Q9NW15 660 aa11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 DIP2CQ9Y2E4 1556 aa11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 NPR1P16066 1061 aa11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 HEATR3Q7Z4Q2 680 aa11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 CDAN1Q8IWY9 1227 aa11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 ZBTB38Q8NAP3 1195 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 CCDC171Q6TFL3 1326 aa11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 FRMPD1Q5SYB0 1578 aa11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 M0QZ92 97 aa11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 UBA7P41226 1012 aa11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 BRPF1P55201 1214 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 UPF3BQ9BZI7 483 aaKnown RBP11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 ZNF408Q9H9D4 720 aa11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 NOD1Q9Y239 953 aa11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 EPB41L2O43491 1005 aaKnown RBP11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 PTPRMP28827 1452 aa11.17□□□□□ -0.62
TNFRSF9-204ENST00000615230 PRPF40AO75400 957 aaKnown RBP11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 CRKLP46109 303 aaKnown RBP11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 TTC12Q9H892 705 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 ALKQ9UM73 1620 aa11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 TRPM1Q7Z4N2 1603 aa11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 CCNA1P78396 465 aa11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 KRT2P35908 639 aa11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 SETQ01105 290 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 CCDC181Q5TID7 509 aa11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 DDX11Q96FC9 970 aa11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 TMEM87BQ96K49 555 aa11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 UBA5Q9GZZ9 404 aa11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 ORC3Q9UBD5 711 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 IBTKQ9P2D0 1353 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 KRT13P13646 458 aa11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 MRE11P49959 708 aa11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 MSANTD4Q8NCY6 345 aa11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 MYO3BQ8WXR4 1341 aa11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 RIMS1Q86UR5 1692 aaKnown RBP11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 IBSPP21815 317 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 PPP1R2P41236 205 aa11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 USP14P54578 494 aa11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 HACE1Q8IYU2 909 aa11.16□□□□□ -0.62
TNFRSF9-204ENST00000615230 STX6O43752 255 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 ZEB2O60315 1214 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 CCDC125Q86Z20 511 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 MEIS3Q99687 375 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 DIP2BQ9P265 1576 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 DLC1Q96QB1 1528 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 EXOC1Q9NV70 894 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 CRB1P82279 1406 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 KLF18A0A0U1RQI7 1052 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 GSE1Q14687 1217 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 MAP3K11Q16584 847 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 TNNI3KQ59H18 835 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 CAVIN1Q6NZI2 390 aaKnown RBP11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 FPGT-TNNI3KV9GXZ4 949 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 SETBP1Q9Y6X0 1596 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 TEX35Q5T0J7 233 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 CHURC1Q8WUH1 139 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 ZNF592Q92610 1267 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 IMPG2Q9BZV3 1241 aa11.15□□□□□ -0.62
TNFRSF9-204ENST00000615230 PCP11498 1178 aaKnown RBP11.15□□□□□ -0.63
TNFRSF9-204ENST00000615230 SPA17Q15506 151 aa11.15□□□□□ -0.63
TNFRSF9-204ENST00000615230 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.15□□□□□ -0.63
TNFRSF9-204ENST00000615230 FAM89AQ96GI7 184 aa11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 CWF19L2Q2TBE0 894 aaKnown RBP11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 MICU3Q86XE3 530 aa11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 GRIN3BO60391 1043 aa11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 HCLS1P14317 486 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 PDE1AP54750 535 aa11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 VPS72Q15906 364 aa11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 SPATA5Q8NB90 893 aa11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 XAGE2Q96GT9 111 aa11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 DDX19AQ9NUU7 478 aaKnown RBP11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 IGSF1Q8N6C5 1336 aa11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 CAVIN2O95810 425 aa11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 SERPINB2P05120 415 aa11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 DEKP35659 375 aaKnown RBP11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 CLEC4GQ6UXB4 293 aa11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 CACNA2D4Q7Z3S7 1137 aa11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 NLRX1Q86UT6 975 aa11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 CNNM3Q8NE01 707 aa11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 PIM2Q9P1W9 311 aa11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 INO80Q9ULG1 1556 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF9-204ENST00000615230 CEP85Q6P2H3 762 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 JARID2Q92833 1246 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 MASTLQ96GX5 879 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 SWAP70Q9UH65 585 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 A0A1B0GUL7 405 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 FBLN1P23142 703 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 CA8P35219 290 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 TBC1D5Q92609 795 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 GJD4Q96KN9 370 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 CPS1P31327 1500 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 RAB3GAP1Q15042 981 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 CDC42BPBQ9Y5S2 1711 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 PRC1O43663 620 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms