RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 COL1A1P02452 1464 aaPredicted RBP9.85□□□□□ -0.83
PCDH9-205ENST00000614931 PSME4Q14997 1843 aa9.84□□□□□ -0.83
PCDH9-205ENST00000614931 YDJCA8MPS7 323 aa9.84□□□□□ -0.83
PCDH9-205ENST00000614931 LMOD1P29536 600 aaPredicted RBP9.84□□□□□ -0.83
PCDH9-205ENST00000614931 PHKA1P46020 1223 aa9.84□□□□□ -0.83
PCDH9-205ENST00000614931 TNIP1Q15025 636 aa9.84□□□□□ -0.83
PCDH9-205ENST00000614931 WASHC4Q2M389 1173 aa9.84□□□□□ -0.83
PCDH9-205ENST00000614931 TBC1D16Q8TBP0 767 aa9.84□□□□□ -0.83
PCDH9-205ENST00000614931 LPIN2Q92539 896 aa9.84□□□□□ -0.83
PCDH9-205ENST00000614931 CREBZFQ9NS37 354 aa9.84□□□□□ -0.83
PCDH9-205ENST00000614931 GPRC5DQ9NZD1 345 aa9.84□□□□□ -0.83
PCDH9-205ENST00000614931 CLEC11AQ9Y240 323 aa9.84□□□□□ -0.83
PCDH9-205ENST00000614931 AKAP2Q9Y2D5 859 aa9.84□□□□□ -0.83
PCDH9-205ENST00000614931 XDHP47989 1333 aa9.83□□□□□ -0.84
PCDH9-205ENST00000614931 TTC41PQ6P2S7 1318 aa9.83□□□□□ -0.84
PCDH9-205ENST00000614931 C6orf229H3BNL8 230 aa9.83□□□□□ -0.84
PCDH9-205ENST00000614931 RAD17O75943 681 aa9.83□□□□□ -0.84
PCDH9-205ENST00000614931 SLC5A1P13866 664 aa9.83□□□□□ -0.84
PCDH9-205ENST00000614931 GMPSP49915 693 aaPredicted RBP9.83□□□□□ -0.84
PCDH9-205ENST00000614931 UBE4AQ14139 1066 aa9.83□□□□□ -0.84
PCDH9-205ENST00000614931 SCARF1Q14162 830 aa9.83□□□□□ -0.84
PCDH9-205ENST00000614931 CIAPIN1Q6FI81 312 aa9.83□□□□□ -0.84
PCDH9-205ENST00000614931 USP50Q70EL3 339 aaPredicted RBP9.83□□□□□ -0.84
PCDH9-205ENST00000614931 TXNRD3Q86VQ6 643 aa9.83□□□□□ -0.84
PCDH9-205ENST00000614931 CNTROBQ8N137 903 aa9.83□□□□□ -0.84
PCDH9-205ENST00000614931 EYA3Q99504 573 aa9.83□□□□□ -0.84
PCDH9-205ENST00000614931 ANKRD2Q9GZV1 360 aa9.83□□□□□ -0.84
PCDH9-205ENST00000614931 ECHDC1Q9NTX5 307 aa9.83□□□□□ -0.84
PCDH9-205ENST00000614931 NDUFB9Q9Y6M9 179 aa9.83□□□□□ -0.84
PCDH9-205ENST00000614931 MAP4K4O95819 1239 aaPredicted RBP9.82□□□□□ -0.84
PCDH9-205ENST00000614931 GYG1P46976 350 aa9.82□□□□□ -0.84
PCDH9-205ENST00000614931 BCAMP50895 628 aa9.82□□□□□ -0.84
PCDH9-205ENST00000614931 MAP1SQ66K74 1059 aaPredicted RBP9.82□□□□□ -0.84
PCDH9-205ENST00000614931 PI16Q6UXB8 463 aa9.82□□□□□ -0.84
PCDH9-205ENST00000614931 EDC3Q96F86 508 aaKnown RBP9.82□□□□□ -0.84
PCDH9-205ENST00000614931 BOLA2Q9H3K6 86 aa9.82□□□□□ -0.84
PCDH9-205ENST00000614931 DBNDD1Q9H9R9 158 aa9.82□□□□□ -0.84
PCDH9-205ENST00000614931 ADARB2Q9NS39 739 aaKnown RBP9.82□□□□□ -0.84
PCDH9-205ENST00000614931 ZNF804BA4D1E1 1349 aa9.82□□□□□ -0.84
PCDH9-205ENST00000614931 MAST2Q6P0Q8 1798 aa9.81□□□□□ -0.84
PCDH9-205ENST00000614931 TMEM88BA6NKF7 163 aa9.81□□□□□ -0.84
PCDH9-205ENST00000614931 RIMBP2O15034 1052 aa9.81□□□□□ -0.84
PCDH9-205ENST00000614931 GLRX3O76003 335 aaKnown RBP9.81□□□□□ -0.84
PCDH9-205ENST00000614931 UFL1O94874 794 aa9.81□□□□□ -0.84
PCDH9-205ENST00000614931 IFIT1P09914 478 aaKnown RBP9.81□□□□□ -0.84
PCDH9-205ENST00000614931 ATP5JP18859 108 aa9.81□□□□□ -0.84
PCDH9-205ENST00000614931 SDSP20132 328 aa9.81□□□□□ -0.84
PCDH9-205ENST00000614931 ATP2B4P23634 1241 aa9.81□□□□□ -0.84
PCDH9-205ENST00000614931 ARID4AP29374 1257 aaPredicted RBP9.81□□□□□ -0.84
PCDH9-205ENST00000614931 MCAMP43121 646 aa9.81□□□□□ -0.84
PCDH9-205ENST00000614931 BMP2KLQ5H9B9 411 aa9.81□□□□□ -0.84
PCDH9-205ENST00000614931 CCDC102BQ68D86 513 aa9.81□□□□□ -0.84
PCDH9-205ENST00000614931 FAM84BQ96KN1 310 aaPredicted RBP9.81□□□□□ -0.84
PCDH9-205ENST00000614931 ZC3H12CQ9C0D7 883 aaKnown RBP9.81□□□□□ -0.84
PCDH9-205ENST00000614931 SNRKQ9NRH2 765 aa9.81□□□□□ -0.84
PCDH9-205ENST00000614931 ANKIB1Q9P2G1 1089 aa9.81□□□□□ -0.84
PCDH9-205ENST00000614931 PGAP2Q9UHJ9 254 aa9.81□□□□□ -0.84
PCDH9-205ENST00000614931 GGA1Q9UJY5 639 aa9.81□□□□□ -0.84
PCDH9-205ENST00000614931 LEMD3Q9Y2U8 911 aa9.81□□□□□ -0.84
PCDH9-205ENST00000614931 MED23Q9ULK4 1368 aa9.8□□□□□ -0.84
PCDH9-205ENST00000614931 PSMD14O00487 310 aa9.8□□□□□ -0.84
PCDH9-205ENST00000614931 ECE2O60344 883 aa9.8□□□□□ -0.84
PCDH9-205ENST00000614931 KCNJ4P48050 445 aa9.8□□□□□ -0.84
PCDH9-205ENST00000614931 DOK7Q18PE1 504 aa9.8□□□□□ -0.84
PCDH9-205ENST00000614931 C8orf34Q49A92 452 aa9.8□□□□□ -0.84
PCDH9-205ENST00000614931 TTC39AQ5SRH9 613 aa9.8□□□□□ -0.84
PCDH9-205ENST00000614931 C15orf52Q6ZUT6 534 aaKnown RBP9.8□□□□□ -0.84
PCDH9-205ENST00000614931 FBXO33Q7Z6M2 555 aa9.8□□□□□ -0.84
PCDH9-205ENST00000614931 DPF2Q92785 391 aa9.8□□□□□ -0.84
PCDH9-205ENST00000614931 GPATCH3Q96I76 525 aa9.8□□□□□ -0.84
PCDH9-205ENST00000614931 HAUS7Q99871 368 aa9.8□□□□□ -0.84
PCDH9-205ENST00000614931 KCNQ5Q9NR82 932 aa9.8□□□□□ -0.84
PCDH9-205ENST00000614931 CNOT7Q9UIV1 285 aaKnown RBP9.8□□□□□ -0.84
PCDH9-205ENST00000614931 IQSEC3Q9UPP2 1182 aaPredicted RBP9.8□□□□□ -0.84
PCDH9-205ENST00000614931 CNTNAP1P78357 1384 aa9.79□□□□□ -0.84
PCDH9-205ENST00000614931 ERC2O15083 957 aa9.79□□□□□ -0.84
PCDH9-205ENST00000614931 RPS12P25398 132 aaKnown RBP9.79□□□□□ -0.84
PCDH9-205ENST00000614931 ZAP70P43403 619 aa9.79□□□□□ -0.84
PCDH9-205ENST00000614931 HIRAP54198 1017 aaPredicted RBP9.79□□□□□ -0.84
PCDH9-205ENST00000614931 RASGRF1Q13972 1273 aa9.79□□□□□ -0.84
PCDH9-205ENST00000614931 GORABQ5T7V8 394 aa9.79□□□□□ -0.84
PCDH9-205ENST00000614931 ZC3H15Q8WU90 426 aaKnown RBP9.79□□□□□ -0.84
PCDH9-205ENST00000614931 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.79□□□□□ -0.84
PCDH9-205ENST00000614931 DNAJC2Q99543 621 aaKnown RBP9.79□□□□□ -0.84
PCDH9-205ENST00000614931 ANTXR1Q9H6X2 564 aa9.79□□□□□ -0.84
PCDH9-205ENST00000614931 HMG20BQ9P0W2 317 aa9.79□□□□□ -0.84
PCDH9-205ENST00000614931 ZBTB12Q9Y330 459 aaPredicted RBP9.79□□□□□ -0.84
PCDH9-205ENST00000614931 SHTN1A0MZ66 631 aa9.78□□□□□ -0.84
PCDH9-205ENST00000614931 H7C1D1 291 aa9.78□□□□□ -0.84
PCDH9-205ENST00000614931 CHGBP05060 677 aa9.78□□□□□ -0.84
PCDH9-205ENST00000614931 VIL1P09327 827 aaKnown RBP9.78□□□□□ -0.84
PCDH9-205ENST00000614931 CCDC158Q5M9N0 1113 aa9.78□□□□□ -0.84
PCDH9-205ENST00000614931 MICALL2Q8IY33 904 aa9.78□□□□□ -0.84
PCDH9-205ENST00000614931 RILPL2Q969X0 211 aa9.78□□□□□ -0.84
PCDH9-205ENST00000614931 ZNF512BQ96KM6 892 aaPredicted RBP9.78□□□□□ -0.84
PCDH9-205ENST00000614931 PIH1D3Q9NQM4 214 aaKnown RBP9.78□□□□□ -0.84
PCDH9-205ENST00000614931 MKRN1Q9UHC7 482 aaKnown RBP9.78□□□□□ -0.84
PCDH9-205ENST00000614931 MYH2Q9UKX2 1941 aa9.78□□□□□ -0.84
PCDH9-205ENST00000614931 TRPM7Q96QT4 1865 aa9.77□□□□□ -0.85
PCDH9-205ENST00000614931 CDK5RAP2Q96SN8 1893 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms