RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 IQCEQ6IPM2 695 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 CC2D1AQ6P1N0 951 aaPredicted RBP3.57□□□□□ -1.84
CBWD3-209ENST00000614377 MEIOBQ8N635 442 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 DHX38Q92620 1227 aaKnown RBP3.57□□□□□ -1.84
CBWD3-209ENST00000614377 CCDC47Q96A33 483 aaKnown RBP3.57□□□□□ -1.84
CBWD3-209ENST00000614377 YIPF2Q9BWQ6 316 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 BACH2Q9BYV9 841 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 ZSWIM4Q9H7M6 989 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 TMOD4Q9NZQ9 345 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 LZTS1Q9Y250 596 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 PRKAB1Q9Y478 270 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 JRKLQ9Y4A0 524 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 KDRP35968 1356 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 SOS2Q07890 1332 aaPredicted RBP3.57□□□□□ -1.84
CBWD3-209ENST00000614377 TMEM238LA0A1B0GVL6 79 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 MTA2O94776 668 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 LDHAP00338 332 aaKnown RBP3.57□□□□□ -1.84
CBWD3-209ENST00000614377 NDUFV2P19404 249 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 RFX1P22670 979 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 ICA1Q05084 483 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 RAPGEF1Q13905 1077 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 DUSP27Q5VZP5 1158 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 WWC2Q6AWC2 1192 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 TTLL5Q6EMB2 1281 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 UBE2Q1Q7Z7E8 422 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 LCA5Q86VQ0 697 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 MYO1HQ8N1T3 1032 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 CCDC89Q8N998 374 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 NFATC2IPQ8NCF5 419 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 FRS2Q8WU20 508 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 HDAC7Q8WUI4 952 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 JDP2Q8WYK2 163 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 PLEKHG4BQ96PX9 1271 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 APBA2Q99767 749 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 PRM3Q9NNZ6 103 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 KLF15Q9UIH9 416 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 BARX2Q9UMQ3 279 aaPredicted RBP3.57□□□□□ -1.84
CBWD3-209ENST00000614377 ZSCAN9O15535 394 aaPredicted RBP3.57□□□□□ -1.84
CBWD3-209ENST00000614377 FOSP01100 380 aaPredicted RBP3.57□□□□□ -1.84
CBWD3-209ENST00000614377 IGHA1P01876 353 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 HNRNPCP07910 306 aaKnown RBP eCLIP3.57□□□□□ -1.84
CBWD3-209ENST00000614377 PDGFRBP09619 1106 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 ZNF24P17028 368 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 CLK1P49759 484 aaKnown RBP3.57□□□□□ -1.84
CBWD3-209ENST00000614377 GRIK3Q13003 919 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 TAF7Q15545 349 aaPredicted RBP3.57□□□□□ -1.84
CBWD3-209ENST00000614377 PREPLQ4J6C6 727 aaPredicted RBP3.57□□□□□ -1.84
CBWD3-209ENST00000614377 CCDC30Q5VVM6 783 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 MCTP2Q6DN12 878 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 NFXL1Q6ZNB6 911 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 STAG1Q8WVM7 1258 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 ANKRD7Q92527 254 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 BHMTQ93088 406 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 TINF2Q9BSI4 451 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 SRRTQ9BXP5 876 aaKnown RBP3.57□□□□□ -1.84
CBWD3-209ENST00000614377 GPCPD1Q9NPB8 672 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 FAM217BQ9NTX9 383 aaPredicted RBP3.57□□□□□ -1.84
CBWD3-209ENST00000614377 RABL2BQ9UNT1 228 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 TMEM98Q9Y2Y6 226 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 CHMP3Q9Y3E7 222 aa3.57□□□□□ -1.84
CBWD3-209ENST00000614377 TRIM64CA6NLI5 447 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 SOCS7O14512 581 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 CDKL5O76039 1030 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 FOSL1P15407 271 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 FSHRP23945 695 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 TNNT3P45378 269 aaPredicted RBP3.56□□□□□ -1.84
CBWD3-209ENST00000614377 RPS6KA3P51812 740 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 RWDD2BP57060 319 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 PDCD2Q16342 344 aaPredicted RBP3.56□□□□□ -1.84
CBWD3-209ENST00000614377 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.56□□□□□ -1.84
CBWD3-209ENST00000614377 CHPFQ8IZ52 775 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 MYOCDQ8IZQ8 938 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 PRPF38AQ8NAV1 312 aaKnown RBP3.56□□□□□ -1.84
CBWD3-209ENST00000614377 RBSNQ9H1K0 784 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 DEF6Q9H4E7 631 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 TMEM63CQ9P1W3 806 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 ZNF652Q9Y2D9 606 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 R3HCC1Q9Y3T6 440 aaKnown RBP3.56□□□□□ -1.84
CBWD3-209ENST00000614377 BRD4O60885 1362 aaPredicted RBP3.56□□□□□ -1.84
CBWD3-209ENST00000614377 RNF123Q5XPI4 1314 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 ERICH4A6NGS2 130 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 TTLL8A6PVC2 850 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 TMEM110-MUSTN1A8MSY1 372 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 BOLA2-SMG1P6H3BVE0 249 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 VCAM1P19320 739 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 ABL2P42684 1182 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 NR5A1Q13285 461 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 FBXO33Q7Z6M2 555 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 HSCBQ8IWL3 235 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 TEX19Q8NA77 164 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 CCDC191Q8NCU4 936 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 PMFBP1Q8TBY8 1022 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 NACC2Q96BF6 587 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 GMLQ99445 158 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 LRRC27Q9C0I9 530 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 TSPY26PQ9H489 355 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 MAP10Q9P2G4 905 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 ASAP1Q9ULH1 1129 aa3.56□□□□□ -1.84
CBWD3-209ENST00000614377 MOXD2PA6NHM9 499 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 SOWAHDA6NJG2 315 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms