RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	TRMT2A	Q8IZ69	625 aa	Known RBP	13.71	□□□□□ -0.21
NPIPB4-222	ENST00000614197	NOB1	Q9ULX3	412 aa	Known RBP	13.71	□□□□□ -0.21
NPIPB4-222	ENST00000614197	TRPM7	Q96QT4	1865 aa		13.7	□□□□□ -0.22
NPIPB4-222	ENST00000614197	SPEF2	Q9C093	1822 aa		13.7	□□□□□ -0.22
NPIPB4-222	ENST00000614197	CAPN15	O75808	1086 aa		13.7	□□□□□ -0.22
NPIPB4-222	ENST00000614197	IFIT1	P09914	478 aa	Known RBP	13.7	□□□□□ -0.22
NPIPB4-222	ENST00000614197	HSPA8	P11142	646 aa	Known RBP	13.7	□□□□□ -0.22
NPIPB4-222	ENST00000614197	DLK2	Q6UY11	383 aa		13.7	□□□□□ -0.22
NPIPB4-222	ENST00000614197	KAZALD1	Q96I82	304 aa		13.7	□□□□□ -0.22
NPIPB4-222	ENST00000614197	PUS3	Q9BZE2	481 aa	Known RBP	13.7	□□□□□ -0.22
NPIPB4-222	ENST00000614197	USP44	Q9H0E7	712 aa		13.7	□□□□□ -0.22
NPIPB4-222	ENST00000614197	GYG1	P46976	350 aa		13.69	□□□□□ -0.22
NPIPB4-222	ENST00000614197	ARMC9	Q7Z3E5	817 aa		13.69	□□□□□ -0.22
NPIPB4-222	ENST00000614197	REM2	Q8IYK8	340 aa	Predicted RBP	13.69	□□□□□ -0.22
NPIPB4-222	ENST00000614197	ANKRD44	Q8N8A2	993 aa		13.69	□□□□□ -0.22
NPIPB4-222	ENST00000614197	RIPOR2	Q9Y4F9	1068 aa		13.69	□□□□□ -0.22
NPIPB4-222	ENST00000614197	SCN9A	Q15858	1988 aa		13.69	□□□□□ -0.22
NPIPB4-222	ENST00000614197	PDE8B	O95263	885 aa		13.68	□□□□□ -0.22
NPIPB4-222	ENST00000614197	SLC5A1	P13866	664 aa		13.68	□□□□□ -0.22
NPIPB4-222	ENST00000614197	RARS	P54136	660 aa	Known RBP	13.68	□□□□□ -0.22
NPIPB4-222	ENST00000614197	PUM3	Q15397	648 aa	Known RBP	13.68	□□□□□ -0.22
NPIPB4-222	ENST00000614197	CFAP100	Q494V2	611 aa		13.68	□□□□□ -0.22
NPIPB4-222	ENST00000614197	MFSD14B	Q5SR56	506 aa		13.68	□□□□□ -0.22
NPIPB4-222	ENST00000614197	TBC1D22A	Q8WUA7	517 aa		13.68	□□□□□ -0.22
NPIPB4-222	ENST00000614197	ARHGAP45	Q92619	1136 aa		13.68	□□□□□ -0.22
NPIPB4-222	ENST00000614197	JAG2	Q9Y219	1238 aa		13.68	□□□□□ -0.22
NPIPB4-222	ENST00000614197	EYA2	O00167	538 aa		13.67	□□□□□ -0.22
NPIPB4-222	ENST00000614197	GNAI3	P08754	354 aa		13.67	□□□□□ -0.22
NPIPB4-222	ENST00000614197	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
NPIPB4-222	ENST00000614197	CHAF1A	Q13111	956 aa	Predicted RBP	13.67	□□□□□ -0.22
NPIPB4-222	ENST00000614197	SUPT20HL1	Q3ZLR7	823 aa		13.67	□□□□□ -0.22
NPIPB4-222	ENST00000614197	LRRC24	Q50LG9	513 aa		13.67	□□□□□ -0.22
NPIPB4-222	ENST00000614197	MTMR14	Q8NCE2	650 aa		13.67	□□□□□ -0.22
NPIPB4-222	ENST00000614197	TDRD7	Q8NHU6	1098 aa	Known RBP	13.67	□□□□□ -0.22
NPIPB4-222	ENST00000614197	FAM84B	Q96KN1	310 aa	Predicted RBP	13.67	□□□□□ -0.22
NPIPB4-222	ENST00000614197	VEZT	Q9HBM0	779 aa		13.67	□□□□□ -0.22
NPIPB4-222	ENST00000614197	TTF2	Q9UNY4	1162 aa	Known RBP	13.67	□□□□□ -0.22
NPIPB4-222	ENST00000614197	PPP2R3B	Q9Y5P8	575 aa		13.67	□□□□□ -0.22
NPIPB4-222	ENST00000614197	FAM205A	Q6ZU69	1335 aa		13.66	□□□□□ -0.22
NPIPB4-222	ENST00000614197	IRS2	Q9Y4H2	1338 aa		13.66	□□□□□ -0.22
NPIPB4-222	ENST00000614197	SLC10A3	P09131	477 aa		13.66	□□□□□ -0.22
NPIPB4-222	ENST00000614197	KIF23	Q02241	960 aa	Predicted RBP	13.66	□□□□□ -0.22
NPIPB4-222	ENST00000614197	TNFAIP1	Q13829	316 aa		13.66	□□□□□ -0.22
NPIPB4-222	ENST00000614197	CERS5	Q8N5B7	392 aa		13.66	□□□□□ -0.22
NPIPB4-222	ENST00000614197	FRAT1	Q92837	279 aa	Predicted RBP	13.66	□□□□□ -0.22
NPIPB4-222	ENST00000614197	CEP126	Q9P2H0	1117 aa		13.66	□□□□□ -0.22
NPIPB4-222	ENST00000614197	FBXO3	Q9UK99	471 aa		13.66	□□□□□ -0.22
NPIPB4-222	ENST00000614197	SCAF8	Q9UPN6	1271 aa	Known RBP	13.66	□□□□□ -0.22
NPIPB4-222	ENST00000614197	SPDYE2B	A6NHP3	402 aa		13.65	□□□□□ -0.22
NPIPB4-222	ENST00000614197	UBE2Q2L	H0YL09	131 aa		13.65	□□□□□ -0.22
NPIPB4-222	ENST00000614197	PPP1R12B	O60237	982 aa	Predicted RBP	13.65	□□□□□ -0.22
NPIPB4-222	ENST00000614197	SPDYE6	P0CI01	402 aa		13.65	□□□□□ -0.22
NPIPB4-222	ENST00000614197	PRAMEF18	Q5VWM3	479 aa		13.65	□□□□□ -0.22
NPIPB4-222	ENST00000614197	MIER1	Q8N108	512 aa		13.65	□□□□□ -0.22
NPIPB4-222	ENST00000614197	KLHDC4	Q8TBB5	520 aa		13.65	□□□□□ -0.22
NPIPB4-222	ENST00000614197	LPIN2	Q92539	896 aa		13.65	□□□□□ -0.22
NPIPB4-222	ENST00000614197	DEFB129	Q9H1M3	183 aa		13.65	□□□□□ -0.22
NPIPB4-222	ENST00000614197	GNL3L	Q9NVN8	582 aa	Known RBP	13.65	□□□□□ -0.22
NPIPB4-222	ENST00000614197	TMOD2	Q9NZR1	351 aa		13.65	□□□□□ -0.22
NPIPB4-222	ENST00000614197	TSKS	Q9UJT2	592 aa		13.65	□□□□□ -0.22
NPIPB4-222	ENST00000614197	MAST3	O60307	1309 aa		13.64	□□□□□ -0.23
NPIPB4-222	ENST00000614197	COL1A1	P02452	1464 aa	Predicted RBP	13.64	□□□□□ -0.23
NPIPB4-222	ENST00000614197	CLRN2	A0PK11	232 aa		13.64	□□□□□ -0.23
NPIPB4-222	ENST00000614197	TNNI2	P48788	182 aa		13.64	□□□□□ -0.23
NPIPB4-222	ENST00000614197	PRKG1	Q13976	671 aa		13.64	□□□□□ -0.23
NPIPB4-222	ENST00000614197	FBXO33	Q7Z6M2	555 aa		13.64	□□□□□ -0.23
NPIPB4-222	ENST00000614197	SIL1	Q9H173	461 aa		13.64	□□□□□ -0.23
NPIPB4-222	ENST00000614197	SAGE1	Q9NXZ1	904 aa		13.64	□□□□□ -0.23
NPIPB4-222	ENST00000614197	SERPINA10	Q9UK55	444 aa		13.64	□□□□□ -0.23
NPIPB4-222	ENST00000614197	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.64	□□□□□ -0.23
NPIPB4-222	ENST00000614197	LRRFIP2	Q9Y608	721 aa	Known RBP	13.64	□□□□□ -0.23
NPIPB4-222	ENST00000614197	PSME4	Q14997	1843 aa		13.64	□□□□□ -0.23
NPIPB4-222	ENST00000614197	FAM155A	B1AL88	458 aa	Predicted RBP	13.63	□□□□□ -0.23
NPIPB4-222	ENST00000614197	CIAO1	O76071	339 aa		13.63	□□□□□ -0.23
NPIPB4-222	ENST00000614197	IL15	P40933	162 aa	Predicted RBP	13.63	□□□□□ -0.23
NPIPB4-222	ENST00000614197	INTS3	Q68E01	1043 aa	Known RBP	13.63	□□□□□ -0.23
NPIPB4-222	ENST00000614197	RASAL3	Q86YV0	1011 aa		13.63	□□□□□ -0.23
NPIPB4-222	ENST00000614197	TEKT1	Q969V4	418 aa		13.63	□□□□□ -0.23
NPIPB4-222	ENST00000614197	ZBED3	Q96IU2	234 aa	Predicted RBP	13.63	□□□□□ -0.23
NPIPB4-222	ENST00000614197	PRMT6	Q96LA8	375 aa	Predicted RBP	13.63	□□□□□ -0.23
NPIPB4-222	ENST00000614197	ANGEL1	Q9UNK9	670 aa	Known RBP	13.63	□□□□□ -0.23
NPIPB4-222	ENST00000614197	THSD7B	Q9C0I4	1608 aa		13.63	□□□□□ -0.23
NPIPB4-222	ENST00000614197	PAPPA2	Q9BXP8	1791 aa		13.63	□□□□□ -0.23
NPIPB4-222	ENST00000614197	BCAM	P50895	628 aa		13.62	□□□□□ -0.23
NPIPB4-222	ENST00000614197	PTPN12	Q05209	780 aa	Known RBP	13.62	□□□□□ -0.23
NPIPB4-222	ENST00000614197	ATP2B3	Q16720	1220 aa		13.62	□□□□□ -0.23
NPIPB4-222	ENST00000614197	ATF7IP	Q6VMQ6	1270 aa		13.62	□□□□□ -0.23
NPIPB4-222	ENST00000614197	MOB2	Q70IA6	237 aa		13.62	□□□□□ -0.23
NPIPB4-222	ENST00000614197	VGLL2	Q8N8G2	317 aa		13.62	□□□□□ -0.23
NPIPB4-222	ENST00000614197	WDR66	Q8TBY9	1149 aa		13.62	□□□□□ -0.23
NPIPB4-222	ENST00000614197	SLC10A4	Q96EP9	437 aa		13.62	□□□□□ -0.23
NPIPB4-222	ENST00000614197	SUGT1	Q9Y2Z0	365 aa		13.62	□□□□□ -0.23
NPIPB4-222	ENST00000614197	TRPA1	O75762	1119 aa		13.61	□□□□□ -0.23
NPIPB4-222	ENST00000614197	CRK	P46108	304 aa		13.61	□□□□□ -0.23
NPIPB4-222	ENST00000614197	IREB2	P48200	963 aa	Known RBP	13.61	□□□□□ -0.23
NPIPB4-222	ENST00000614197	HDLBP	Q00341	1268 aa	Known RBP	13.61	□□□□□ -0.23
NPIPB4-222	ENST00000614197	SREBF2	Q12772	1141 aa		13.61	□□□□□ -0.23
NPIPB4-222	ENST00000614197	RASA3	Q14644	834 aa		13.61	□□□□□ -0.23
NPIPB4-222	ENST00000614197	ZKSCAN2	Q63HK3	967 aa		13.61	□□□□□ -0.23
NPIPB4-222	ENST00000614197	FTSJ3	Q8IY81	847 aa	Known RBP	13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms