RNA–Protein interactions for RNA: ENST00000614090.1

PTPN20CP-201, Transcript of protein tyrosine phosphatase, non-receptor type 20C, pseudogene, humanhuman

BASIC

Gene PTPN20CP, Length 920 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20CP-201ENST00000614090 NBPF12Q5TAG4 269 aaPredicted RBP16.35■□□□□ 0.21
PTPN20CP-201ENST00000614090 HDGFL1Q5TGJ6 251 aa16.35■□□□□ 0.21
PTPN20CP-201ENST00000614090 CCDC85AQ96PX6 553 aaPredicted RBP16.35■□□□□ 0.21
PTPN20CP-201ENST00000614090 ARHGAP39Q9C0H5 1083 aa16.35■□□□□ 0.21
PTPN20CP-201ENST00000614090 PNNQ9H307 717 aaKnown RBP16.35■□□□□ 0.21
PTPN20CP-201ENST00000614090 ELP3Q9H9T3 547 aa16.35■□□□□ 0.21
PTPN20CP-201ENST00000614090 DBF4Q9UBU7 674 aaPredicted RBP16.35■□□□□ 0.21
PTPN20CP-201ENST00000614090 CCL15-CCL14A0A0B4J2E2 113 aa16.34■□□□□ 0.21
PTPN20CP-201ENST00000614090 MYO1BO43795 1136 aa16.34■□□□□ 0.21
PTPN20CP-201ENST00000614090 WDHD1O75717 1129 aaPredicted RBP16.34■□□□□ 0.21
PTPN20CP-201ENST00000614090 GTF2A2P52657 109 aa16.34■□□□□ 0.21
PTPN20CP-201ENST00000614090 CCL15Q16663 113 aa16.34■□□□□ 0.21
PTPN20CP-201ENST00000614090 KRT24Q2M2I5 525 aa16.34■□□□□ 0.21
PTPN20CP-201ENST00000614090 COL25A1Q9BXS0 654 aaPredicted RBP16.34■□□□□ 0.21
PTPN20CP-201ENST00000614090 BSDC1Q9NW68 430 aaPredicted RBP16.34■□□□□ 0.21
PTPN20CP-201ENST00000614090 HYPKQ9NX55 129 aa16.34■□□□□ 0.21
PTPN20CP-201ENST00000614090 MINPP1Q9UNW1 487 aa16.34■□□□□ 0.21
PTPN20CP-201ENST00000614090 STXBP5LQ9Y2K9 1186 aa16.34■□□□□ 0.21
PTPN20CP-201ENST00000614090 ARAP2Q8WZ64 1704 aa16.33■□□□□ 0.21
PTPN20CP-201ENST00000614090 TLR2O60603 784 aa16.33■□□□□ 0.2
PTPN20CP-201ENST00000614090 GJB1P08034 283 aa16.33■□□□□ 0.2
PTPN20CP-201ENST00000614090 HOXB7P09629 217 aa16.33■□□□□ 0.2
PTPN20CP-201ENST00000614090 TXNRD3Q86VQ6 643 aa16.33■□□□□ 0.2
PTPN20CP-201ENST00000614090 FAM43AQ8N2R8 423 aa16.33■□□□□ 0.2
PTPN20CP-201ENST00000614090 GTF2IP78347 998 aa16.32■□□□□ 0.2
PTPN20CP-201ENST00000614090 CCDC191Q8NCU4 936 aa16.32■□□□□ 0.2
PTPN20CP-201ENST00000614090 ZCCHC17Q9NP64 241 aaKnown RBP16.32■□□□□ 0.2
PTPN20CP-201ENST00000614090 LEMD3Q9Y2U8 911 aa16.32■□□□□ 0.2
PTPN20CP-201ENST00000614090 CLRN2A0PK11 232 aa16.31■□□□□ 0.2
PTPN20CP-201ENST00000614090 SPDYE2BA6NHP3 402 aa16.31■□□□□ 0.2
PTPN20CP-201ENST00000614090 FARP2O94887 1054 aaPredicted RBP16.31■□□□□ 0.2
PTPN20CP-201ENST00000614090 SPDYE6P0CI01 402 aa16.31■□□□□ 0.2
PTPN20CP-201ENST00000614090 RIPK4P57078 832 aa16.31■□□□□ 0.2
PTPN20CP-201ENST00000614090 LMOD3Q0VAK6 560 aa16.31■□□□□ 0.2
PTPN20CP-201ENST00000614090 DEFB123Q8N688 67 aa16.31■□□□□ 0.2
PTPN20CP-201ENST00000614090 VEZTQ9HBM0 779 aa16.31■□□□□ 0.2
PTPN20CP-201ENST00000614090 CCL5P13501 91 aa16.3■□□□□ 0.2
PTPN20CP-201ENST00000614090 GRK4P32298 578 aa16.3■□□□□ 0.2
PTPN20CP-201ENST00000614090 CTSWP56202 376 aa16.3■□□□□ 0.2
PTPN20CP-201ENST00000614090 GOLGA2Q08379 1002 aa16.3■□□□□ 0.2
PTPN20CP-201ENST00000614090 RASA3Q14644 834 aa16.3■□□□□ 0.2
PTPN20CP-201ENST00000614090 RIC3Q7Z5B4 369 aa16.3■□□□□ 0.2
PTPN20CP-201ENST00000614090 CNKSR2Q8WXI2 1034 aa16.3■□□□□ 0.2
PTPN20CP-201ENST00000614090 SRRDQ9UH36 339 aa16.3■□□□□ 0.2
PTPN20CP-201ENST00000614090 PCDHAC2Q9Y5I4 1007 aa16.3■□□□□ 0.2
PTPN20CP-201ENST00000614090 MGAMO43451 1857 aa16.3■□□□□ 0.2
PTPN20CP-201ENST00000614090 CHL1O00533 1208 aa16.29■□□□□ 0.2
PTPN20CP-201ENST00000614090 EVI5O60447 810 aa16.29■□□□□ 0.2
PTPN20CP-201ENST00000614090 CFAP100Q494V2 611 aa16.29■□□□□ 0.2
PTPN20CP-201ENST00000614090 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.29■□□□□ 0.2
PTPN20CP-201ENST00000614090 CERS5Q8N5B7 392 aa16.29■□□□□ 0.2
PTPN20CP-201ENST00000614090 CWC25Q9NXE8 425 aaPredicted RBP16.29■□□□□ 0.2
PTPN20CP-201ENST00000614090 A0A1B0GUL6 1792 aa16.28■□□□□ 0.2
PTPN20CP-201ENST00000614090 KLRK1P26718 216 aa16.28■□□□□ 0.2
PTPN20CP-201ENST00000614090 TNFAIP1Q13829 316 aa16.28■□□□□ 0.2
PTPN20CP-201ENST00000614090 VGLL4Q14135 290 aa16.28■□□□□ 0.2
PTPN20CP-201ENST00000614090 RAET1EQ8TD07 263 aa16.28■□□□□ 0.2
PTPN20CP-201ENST00000614090 PRMT6Q96LA8 375 aaPredicted RBP16.28■□□□□ 0.2
PTPN20CP-201ENST00000614090 MYD88Q99836 296 aa16.28■□□□□ 0.2
PTPN20CP-201ENST00000614090 RNF208Q9H0X6 261 aa16.28■□□□□ 0.2
PTPN20CP-201ENST00000614090 STAP2Q9UGK3 403 aa16.28■□□□□ 0.2
PTPN20CP-201ENST00000614090 RIPOR2Q9Y4F9 1068 aa16.28■□□□□ 0.2
PTPN20CP-201ENST00000614090 VCANP13611 3396 aa16.28■□□□□ 0.2
PTPN20CP-201ENST00000614090 AOX1Q06278 1338 aa16.27■□□□□ 0.2
PTPN20CP-201ENST00000614090 HOXD10P28358 340 aa16.27■□□□□ 0.2
PTPN20CP-201ENST00000614090 BMP8BP34820 402 aa16.27■□□□□ 0.2
PTPN20CP-201ENST00000614090 UBXN2AP68543 259 aa16.27■□□□□ 0.2
PTPN20CP-201ENST00000614090 TRIM26Q12899 539 aaPredicted RBP16.27■□□□□ 0.2
PTPN20CP-201ENST00000614090 HELBQ8NG08 1087 aaPredicted RBP16.27■□□□□ 0.2
PTPN20CP-201ENST00000614090 U2AF1L4Q8WU68 220 aaKnown RBP16.27■□□□□ 0.2
PTPN20CP-201ENST00000614090 JARID2Q92833 1246 aaPredicted RBP16.27■□□□□ 0.2
PTPN20CP-201ENST00000614090 CETPP11597 493 aa16.26■□□□□ 0.19
PTPN20CP-201ENST00000614090 MAP3K9P80192 1104 aa16.26■□□□□ 0.19
PTPN20CP-201ENST00000614090 Q7L0L9 218 aa16.26■□□□□ 0.19
PTPN20CP-201ENST00000614090 TTLL11Q8NHH1 800 aa16.26■□□□□ 0.19
PTPN20CP-201ENST00000614090 TRIM47Q96LD4 638 aa16.26■□□□□ 0.19
PTPN20CP-201ENST00000614090 PCGF6Q9BYE7 350 aa16.26■□□□□ 0.19
PTPN20CP-201ENST00000614090 GREM2Q9H772 168 aa16.26■□□□□ 0.19
PTPN20CP-201ENST00000614090 CD209Q9NNX6 404 aa16.26■□□□□ 0.19
PTPN20CP-201ENST00000614090 MTMR10Q9NXD2 777 aa16.26■□□□□ 0.19
PTPN20CP-201ENST00000614090 CSADQ9Y600 493 aa16.26■□□□□ 0.19
PTPN20CP-201ENST00000614090 TTC28Q96AY4 2481 aa16.25■□□□□ 0.19
PTPN20CP-201ENST00000614090 MYPNQ86TC9 1320 aa16.25■□□□□ 0.19
PTPN20CP-201ENST00000614090 SPDYE5A6NIY4 337 aa16.25■□□□□ 0.19
PTPN20CP-201ENST00000614090 BTBD19C9JJ37 291 aa16.25■□□□□ 0.19
PTPN20CP-201ENST00000614090 CAPN2P17655 700 aa16.25■□□□□ 0.19
PTPN20CP-201ENST00000614090 OSBPP22059 807 aa16.25■□□□□ 0.19
PTPN20CP-201ENST00000614090 CTGFP29279 349 aa16.25■□□□□ 0.19
PTPN20CP-201ENST00000614090 TMPOP42166 694 aaKnown RBP16.25■□□□□ 0.19
PTPN20CP-201ENST00000614090 PSMC4P43686 418 aa16.25■□□□□ 0.19
PTPN20CP-201ENST00000614090 FKBP1AP62942 108 aaKnown RBP16.25■□□□□ 0.19
PTPN20CP-201ENST00000614090 C17orf99Q6UX52 265 aa16.25■□□□□ 0.19
PTPN20CP-201ENST00000614090 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.25■□□□□ 0.19
PTPN20CP-201ENST00000614090 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.25■□□□□ 0.19
PTPN20CP-201ENST00000614090 GDF15Q99988 308 aa16.25■□□□□ 0.19
PTPN20CP-201ENST00000614090 ANKRD2Q9GZV1 360 aa16.25■□□□□ 0.19
PTPN20CP-201ENST00000614090 F8W031 263 aaPredicted RBP16.24■□□□□ 0.19
PTPN20CP-201ENST00000614090 IGHMBP2P38935 993 aaKnown RBP16.24■□□□□ 0.19
PTPN20CP-201ENST00000614090 LRIT3Q3SXY7 679 aa16.24■□□□□ 0.19
PTPN20CP-201ENST00000614090 SPDYE2Q495Y8 402 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms